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The map label for this gene is ypfJ [H]

Identifier: 222110265

GI number: 222110265

Start: 1093033

End: 1093896

Strand: Direct

Name: ypfJ [H]

Synonym: Dtpsy_1052

Alternate gene names: 222110265

Gene position: 1093033-1093896 (Clockwise)

Preceding gene: 222110264

Following gene: 222110266

Centisome position: 28.79

GC content: 67.36

Gene sequence:

>864_bases
ATGAGATGGGAAGGCAATCGCGAATCGGACAACGTGGAAGACCGGCGCAGCGGCGGCGGGGGCGGCTTCATCGGCGGACG
CTCGATCGGCATTGGCACCATCGTTGTGGCGCTCATCGGCTGGGGTGTGTTTGGCATCAACCCGCTGACCACCATCGGCG
TACTGTCGGGCGGGGGCGCGCCGCAGGTCCAACAGGGGCCGGCCCAGCGTCCGCCGCAGGGCGACCGTGAGGCCGCCTTC
GTCTCCACCGTCCTGGCGTCCACGGAGGATGTGTGGGCGCAGGTGTTCCAGCAGGGTGGGGCGCAGTACCGCCAGCCCAA
GTTGGTGCTCTACCGCGGCGCCACGCCCACGGCCTGTGGCACGGGGCAGAGCGCGATGGGACCGTTTTACTGCCCCGGGG
ACCAAAAGGTGTACCTGGACATGGATTTCTTCGACACCATGAGCCGCCAGCTGGGTGCGCCAGGCGAATTTGCCCGCGCC
TACGTGATCGCGCACGAGGTCGGCCACCATGTGCAGACCCTGCTGGGCACCACCGGCAAGGTGGACGGCATGCGCGGGCG
CGTGAGCCAGCGCGAACAGAACGCGCTGTCGGTTCGGCTGGAACTGCAGGCCGACTGTTACGCCGGCATTTGGGCCCACC
ATTCGCAACAGGCCAAGAACTGGCTGGAGCAAGGCGACATCGAGTCCGCGGTGAACGCCGCCGAGCAGATCGGTGACGAC
GCGCTGCAGCGCCAGCAGACCGGCACCGTGCGGCCCGATGCATTCACCCACGGCTCCAGCGCGCAGCGCGTGCGGTGGTT
CACGCAGGGGTTCAAGACCGGCAGTGTGCAAGGCTGCAACACTTTCAACGCACAGTCGCTTTGA

Upstream 100 bases:

>100_bases
ATGTTGCTGGCAGCGCAGTAGTGCGCGGCGCGAAATCCCGAGGGTGCCGCCGCGGGCGTAACATCGGCGGCTGGTGCGTC
GTGCACGCAGGAGATCACCC

Downstream 100 bases:

>100_bases
CACCGTGAACGCGCGCTAAGCCGTCGTTTTCGCGCCAAGCAGGAGACGCCCCGGTACAGGCCGTCGACGGCCTGGTTGGC
CTTCGCCGCTGCTGCAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MRWEGNRESDNVEDRRSGGGGGFIGGRSIGIGTIVVALIGWGVFGINPLTTIGVLSGGGAPQVQQGPAQRPPQGDREAAF
VSTVLASTEDVWAQVFQQGGAQYRQPKLVLYRGATPTACGTGQSAMGPFYCPGDQKVYLDMDFFDTMSRQLGAPGEFARA
YVIAHEVGHHVQTLLGTTGKVDGMRGRVSQREQNALSVRLELQADCYAGIWAHHSQQAKNWLEQGDIESAVNAAEQIGDD
ALQRQQTGTVRPDAFTHGSSAQRVRWFTQGFKTGSVQGCNTFNAQSL

Sequences:

>Translated_287_residues
MRWEGNRESDNVEDRRSGGGGGFIGGRSIGIGTIVVALIGWGVFGINPLTTIGVLSGGGAPQVQQGPAQRPPQGDREAAF
VSTVLASTEDVWAQVFQQGGAQYRQPKLVLYRGATPTACGTGQSAMGPFYCPGDQKVYLDMDFFDTMSRQLGAPGEFARA
YVIAHEVGHHVQTLLGTTGKVDGMRGRVSQREQNALSVRLELQADCYAGIWAHHSQQAKNWLEQGDIESAVNAAEQIGDD
ALQRQQTGTVRPDAFTHGSSAQRVRWFTQGFKTGSVQGCNTFNAQSL
>Mature_287_residues
MRWEGNRESDNVEDRRSGGGGGFIGGRSIGIGTIVVALIGWGVFGINPLTTIGVLSGGGAPQVQQGPAQRPPQGDREAAF
VSTVLASTEDVWAQVFQQGGAQYRQPKLVLYRGATPTACGTGQSAMGPFYCPGDQKVYLDMDFFDTMSRQLGAPGEFARA
YVIAHEVGHHVQTLLGTTGKVDGMRGRVSQREQNALSVRLELQADCYAGIWAHHSQQAKNWLEQGDIESAVNAAEQIGDD
ALQRQQTGTVRPDAFTHGSSAQRVRWFTQGFKTGSVQGCNTFNAQSL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=297, Percent_Identity=50.1683501683502, Blast_Score=284, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 30818; Mature: 30818

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRWEGNRESDNVEDRRSGGGGGFIGGRSIGIGTIVVALIGWGVFGINPLTTIGVLSGGGA
CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCC
PQVQQGPAQRPPQGDREAAFVSTVLASTEDVWAQVFQQGGAQYRQPKLVLYRGATPTACG
CCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
TGQSAMGPFYCPGDQKVYLDMDFFDTMSRQLGAPGEFARAYVIAHEVGHHVQTLLGTTGK
CCCCCCCCEECCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
VDGMRGRVSQREQNALSVRLELQADCYAGIWAHHSQQAKNWLEQGDIESAVNAAEQIGDD
CCCCCCHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHH
ALQRQQTGTVRPDAFTHGSSAQRVRWFTQGFKTGSVQGCNTFNAQSL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRWEGNRESDNVEDRRSGGGGGFIGGRSIGIGTIVVALIGWGVFGINPLTTIGVLSGGGA
CCCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCC
PQVQQGPAQRPPQGDREAAFVSTVLASTEDVWAQVFQQGGAQYRQPKLVLYRGATPTACG
CCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC
TGQSAMGPFYCPGDQKVYLDMDFFDTMSRQLGAPGEFARAYVIAHEVGHHVQTLLGTTGK
CCCCCCCCEECCCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
VDGMRGRVSQREQNALSVRLELQADCYAGIWAHHSQQAKNWLEQGDIESAVNAAEQIGDD
CCCCCCHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHH
ALQRQQTGTVRPDAFTHGSSAQRVRWFTQGFKTGSVQGCNTFNAQSL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]