| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110180
Identifier: 222110180
GI number: 222110180
Start: 1002729
End: 1003388
Strand: Direct
Name: 222110180
Synonym: Dtpsy_0966
Alternate gene names: NA
Gene position: 1002729-1003388 (Clockwise)
Preceding gene: 222110179
Following gene: 222110185
Centisome position: 26.41
GC content: 69.85
Gene sequence:
>660_bases ATGGAAGTCACCCAGGCCCTGCGTGCGCGCCGCTCGGTGCGCGCCTTCCTGCCCGACGCGCCCCCCGCGGCGACGGTGCA GACGATTCTTCAAGAAGCCGCACAGGCGGCCTCCGGCGGCAATCTGCAGCCCTGGCGCGTGGTGGCCCTCACGGGCGCGC CGCTGCAGGAGTTGTTGGGGGTCGTCGCCCAGGCGCAACCCGAGGAAGGACCGGACAACCAGTCCTACCCGCCGGGCCTA TGGGAGCCCTACCGCACACGCCGCTTCGCCAACGGCGAAGACCTGTACCGCAGCATCGGCATTCCGCGCGAGGACAAGGC CGGGCGCCTGCAGCAGCTGGCCAAGAATGCCGAGCTGTTTGGCGCGCCCGTGGGCATTTTTGTGTGCGTGGACGAGCGCA TGGGTCAGCCGCAATGGGCTGATCTGGGGATCTACCTGCAGTCGCTGATGCTGCTGGCGGTGCAGCATGGGCTGGCCACC TGCGCCCAGGGCTTCTGGCGCCGCTATGCCGGCACGCTGCAGCAGCAGCTGGGACTGCCCGAGCCGTACCGCGTGGCCTT TGGCGTGGCGCTGGGCTATGAGGATGCGGCGGCGCCCATCAATACCCTGCGCTCCTCGCGCGCTCCCTGGGGCGAGTGGG GCGAGATGCGCGGTTTCTGA
Upstream 100 bases:
>100_bases TCCACCCCGCAAAGCGGCGGCTGCGTACCCGACGAGGCCGTGCGCTGCGAGCAATTCCAGGCGGCCAAGCTCAACGACAT CATTGGCAAGTAAATAATCC
Downstream 100 bases:
>100_bases GCCCGAGGAAGGGCTGCCGGGGCCTTTTGTTGGATGAACGCTCCTAATTCAATAGCTACCAGCGCTTGATATATAAGCGC TAGCGGCCTATTTTCCCTTG
Product: nitroreductase
Products: NA
Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; P-Nitrobenzoate Reductase; NfnB Protein; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Nitrobenzoate Reductase
Number of amino acids: Translated: 219; Mature: 219
Protein sequence:
>219_residues MEVTQALRARRSVRAFLPDAPPAATVQTILQEAAQAASGGNLQPWRVVALTGAPLQELLGVVAQAQPEEGPDNQSYPPGL WEPYRTRRFANGEDLYRSIGIPREDKAGRLQQLAKNAELFGAPVGIFVCVDERMGQPQWADLGIYLQSLMLLAVQHGLAT CAQGFWRRYAGTLQQQLGLPEPYRVAFGVALGYEDAAAPINTLRSSRAPWGEWGEMRGF
Sequences:
>Translated_219_residues MEVTQALRARRSVRAFLPDAPPAATVQTILQEAAQAASGGNLQPWRVVALTGAPLQELLGVVAQAQPEEGPDNQSYPPGL WEPYRTRRFANGEDLYRSIGIPREDKAGRLQQLAKNAELFGAPVGIFVCVDERMGQPQWADLGIYLQSLMLLAVQHGLAT CAQGFWRRYAGTLQQQLGLPEPYRVAFGVALGYEDAAAPINTLRSSRAPWGEWGEMRGF >Mature_219_residues MEVTQALRARRSVRAFLPDAPPAATVQTILQEAAQAASGGNLQPWRVVALTGAPLQELLGVVAQAQPEEGPDNQSYPPGL WEPYRTRRFANGEDLYRSIGIPREDKAGRLQQLAKNAELFGAPVGIFVCVDERMGQPQWADLGIYLQSLMLLAVQHGLAT CAQGFWRRYAGTLQQQLGLPEPYRVAFGVALGYEDAAAPINTLRSSRAPWGEWGEMRGF
Specific function: Unknown
COG id: COG0778
COG function: function code C; Nitroreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24003; Mature: 24003
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVTQALRARRSVRAFLPDAPPAATVQTILQEAAQAASGGNLQPWRVVALTGAPLQELLG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHH VVAQAQPEEGPDNQSYPPGLWEPYRTRRFANGEDLYRSIGIPREDKAGRLQQLAKNAELF HHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GAPVGIFVCVDERMGQPQWADLGIYLQSLMLLAVQHGLATCAQGFWRRYAGTLQQQLGLP CCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPYRVAFGVALGYEDAAAPINTLRSSRAPWGEWGEMRGF CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MEVTQALRARRSVRAFLPDAPPAATVQTILQEAAQAASGGNLQPWRVVALTGAPLQELLG CCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHH VVAQAQPEEGPDNQSYPPGLWEPYRTRRFANGEDLYRSIGIPREDKAGRLQQLAKNAELF HHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHH GAPVGIFVCVDERMGQPQWADLGIYLQSLMLLAVQHGLATCAQGFWRRYAGTLQQQLGLP CCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC EPYRVAFGVALGYEDAAAPINTLRSSRAPWGEWGEMRGF CCHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA