| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is est [H]
Identifier: 222110154
GI number: 222110154
Start: 964128
End: 964967
Strand: Direct
Name: est [H]
Synonym: Dtpsy_0940
Alternate gene names: 222110154
Gene position: 964128-964967 (Clockwise)
Preceding gene: 222110150
Following gene: 222110155
Centisome position: 25.39
GC content: 70.48
Gene sequence:
>840_bases ATGATCCAGAGCACCCGTCCTTCATCGCCCTCCCTCTGCACCGACACCACCATTGAGGTGGCCACGGAGCAGCAGGTGGC CGTGCGCATGTACGGACGCAAGAAAGCTGGCGAGACGTCGCCGCTGGTGGTGCATTTCCATGGTGGCGCATTCGTGTCGG GTGACCTCGACAACGGTTGCACGGTGGGTGGGCTGCTGGAGGCCGCGGGCGCGCGGGTGGTGTCGGTGGCGTACCCGCTG GCACCGGCGCATCCGTTTCCCCAGCCGCTGGAGACCGGCTACGCCGTGCTCAAGTGGGCGTTCAAGCACCGCTCGCGCCT GGCGGGGCCGGGTGCGCTCGTGTATCTGGCGGGCGAGGAGGCGGGTGGCAACCTGGCGGCGGGCATCAGCATGATGGCGC GCGACCAGTCGCACCCACCGCTGGCCGGCCAGATCCTGCTGTCGCCCATGCTGGACCCCTGCGTGGGTACTCCGTCGCTG CGCGCCGCCACGGGCGAAGCCACGGCGTGCAAGTGGGCCGATGGCTGGCTGAAGTTTTTCCGCTGCGCGCGCGATGCCGA GCATCCCTACGCCGTGCCCGGTACCGCGCAGCGGCTGGCGGGGCTCCCGCCCACGCTGGTGCTGGTGGGCGACACCGACC CCCTGCGCGACGAGGCGCTGGCCTACGCCGCGCGCCTGGAAGCGGCGGGGCTTGCGGTCAAGCGGCATGTCTTCACCCAG GCGGCGCAGTGGCCCGACGCCCTGCTGCAACCCGGAACGAATCCCTGCCCCTGCGCGGTGCAGGTGCAGGAGCAGTTCCG GCTTTTCTTTGAGGCCACGCGATGTCCGGCATCGAGCTGA
Upstream 100 bases:
>100_bases GTTCGGCATTGGGAAACAGTGCGGTGAAAGATGCACCATTTATCGGCACTGCCCGCCTCGCTACATTTCCCATCAACCGG ACTTGCCGGCCAACCCAACC
Downstream 100 bases:
>100_bases GCCTTGGGATCCAGCCCCTGTACGGGCTTTAGGGAGGGGCGAGGCGCCTGATCCTCACCCGCGGTGAGTTTTCGCGCGCC GAGCCCGCTCCAGCGCCAAC
Product: alpha/beta hydrolase fold-3 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MIQSTRPSSPSLCTDTTIEVATEQQVAVRMYGRKKAGETSPLVVHFHGGAFVSGDLDNGCTVGGLLEAAGARVVSVAYPL APAHPFPQPLETGYAVLKWAFKHRSRLAGPGALVYLAGEEAGGNLAAGISMMARDQSHPPLAGQILLSPMLDPCVGTPSL RAATGEATACKWADGWLKFFRCARDAEHPYAVPGTAQRLAGLPPTLVLVGDTDPLRDEALAYAARLEAAGLAVKRHVFTQ AAQWPDALLQPGTNPCPCAVQVQEQFRLFFEATRCPASS
Sequences:
>Translated_279_residues MIQSTRPSSPSLCTDTTIEVATEQQVAVRMYGRKKAGETSPLVVHFHGGAFVSGDLDNGCTVGGLLEAAGARVVSVAYPL APAHPFPQPLETGYAVLKWAFKHRSRLAGPGALVYLAGEEAGGNLAAGISMMARDQSHPPLAGQILLSPMLDPCVGTPSL RAATGEATACKWADGWLKFFRCARDAEHPYAVPGTAQRLAGLPPTLVLVGDTDPLRDEALAYAARLEAAGLAVKRHVFTQ AAQWPDALLQPGTNPCPCAVQVQEQFRLFFEATRCPASS >Mature_279_residues MIQSTRPSSPSLCTDTTIEVATEQQVAVRMYGRKKAGETSPLVVHFHGGAFVSGDLDNGCTVGGLLEAAGARVVSVAYPL APAHPFPQPLETGYAVLKWAFKHRSRLAGPGALVYLAGEEAGGNLAAGISMMARDQSHPPLAGQILLSPMLDPCVGTPSL RAATGEATACKWADGWLKFFRCARDAEHPYAVPGTAQRLAGLPPTLVLVGDTDPLRDEALAYAARLEAAGLAVKRHVFTQ AAQWPDALLQPGTNPCPCAVQVQEQFRLFFEATRCPASS
Specific function: Unknown
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI21328446, Length=116, Percent_Identity=33.6206896551724, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 29472; Mature: 29472
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSTRPSSPSLCTDTTIEVATEQQVAVRMYGRKKAGETSPLVVHFHGGAFVSGDLDNGC CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCC TVGGLLEAAGARVVSVAYPLAPAHPFPQPLETGYAVLKWAFKHRSRLAGPGALVYLAGEE CHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC AGGNLAAGISMMARDQSHPPLAGQILLSPMLDPCVGTPSLRAATGEATACKWADGWLKFF CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCEEECHHHHHHHH RCARDAEHPYAVPGTAQRLAGLPPTLVLVGDTDPLRDEALAYAARLEAAGLAVKRHVFTQ HHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAQWPDALLQPGTNPCPCAVQVQEQFRLFFEATRCPASS HHCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIQSTRPSSPSLCTDTTIEVATEQQVAVRMYGRKKAGETSPLVVHFHGGAFVSGDLDNGC CCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCC TVGGLLEAAGARVVSVAYPLAPAHPFPQPLETGYAVLKWAFKHRSRLAGPGALVYLAGEE CHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC AGGNLAAGISMMARDQSHPPLAGQILLSPMLDPCVGTPSLRAATGEATACKWADGWLKFF CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEECCCCCCEEECHHHHHHHH RCARDAEHPYAVPGTAQRLAGLPPTLVLVGDTDPLRDEALAYAARLEAAGLAVKRHVFTQ HHHHCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AAQWPDALLQPGTNPCPCAVQVQEQFRLFFEATRCPASS HHCCCHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]