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The map label for this gene is dedA [H]

Identifier: 222110109

GI number: 222110109

Start: 919689

End: 920351

Strand: Direct

Name: dedA [H]

Synonym: Dtpsy_0895

Alternate gene names: 222110109

Gene position: 919689-920351 (Clockwise)

Preceding gene: 222110105

Following gene: 222110114

Centisome position: 24.22

GC content: 61.69

Gene sequence:

>663_bases
TTGGAAGTCTTTGCGTTCCTGATCGATTTCATCCTGCATGTGGACAAGCATCTCGCCGCCTTCGTGGCCAGCTATGGCCC
CTGGGTGTACGCGCTGCTGTTCATCATCGTGTTCGTGGAGACGGGCGTGGTGGTCATGCCCTTTCTGCCGGGTGACTCGC
TGCTGTTCGTGGTGGGGGCGCTCAGCGGTGCAGGGTTGATGAACTTCCCGCTGGCCTGCGCGGTTCTGCTGGCTGCGGCG
ATCCTGGGCGACCAGTGCAACTACAGCATCGGGCGCTATTTCGGACCCAAGGTATTCCAGTGGGAAAGCTCGCGCTGGTT
CAACAAGAAGGCCTTCGACCAGGCCCATGCGTTCTATGAGCGCTATGGCGGCATCACCATCGTGCTGGCGCGCTTCATGC
CCTTCATCCGCACGTTCGCTCCCTTCGTGGGCGGCGTGGCGGCCATGGGGCGGGGCAAGTTCACGGCCTACAACGTCGGT
GGTGCGGTACTGTGGGTCGTGGGCATCTGCACGGCGGGGTACTTCTTTGGGAACATGGCCTGGGTGCAGCGGCATCTGGA
CAAGATCATCTGGGCCATGATCTTCATCCCCGGCCTGATTGCCATCTTTGGCGCATGGCGCGCCGGGCGCAAGGCACAGG
GAACTGCGGTTGCTATTGAATAG

Upstream 100 bases:

>100_bases
CCAACAAGTGTGAGCAATTGCCAATGGTGGTGTGGTGCAACCAGGGGCATTGGGGGCGCGGGTACATTACGGCGCACTTC
GCCAACGGGAGGTTTGTGTT

Downstream 100 bases:

>100_bases
ATAGCTATTCGCGCTTGCTAGAAGCGCGTTAGGGCCATATTCCATATAAAACGCCACCGCCTCGCGAGAGGGGTGGCGTT
CTGCATGGTGAGGCTCTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MEVFAFLIDFILHVDKHLAAFVASYGPWVYALLFIIVFVETGVVVMPFLPGDSLLFVVGALSGAGLMNFPLACAVLLAAA
ILGDQCNYSIGRYFGPKVFQWESSRWFNKKAFDQAHAFYERYGGITIVLARFMPFIRTFAPFVGGVAAMGRGKFTAYNVG
GAVLWVVGICTAGYFFGNMAWVQRHLDKIIWAMIFIPGLIAIFGAWRAGRKAQGTAVAIE

Sequences:

>Translated_220_residues
MEVFAFLIDFILHVDKHLAAFVASYGPWVYALLFIIVFVETGVVVMPFLPGDSLLFVVGALSGAGLMNFPLACAVLLAAA
ILGDQCNYSIGRYFGPKVFQWESSRWFNKKAFDQAHAFYERYGGITIVLARFMPFIRTFAPFVGGVAAMGRGKFTAYNVG
GAVLWVVGICTAGYFFGNMAWVQRHLDKIIWAMIFIPGLIAIFGAWRAGRKAQGTAVAIE
>Mature_220_residues
MEVFAFLIDFILHVDKHLAAFVASYGPWVYALLFIIVFVETGVVVMPFLPGDSLLFVVGALSGAGLMNFPLACAVLLAAA
ILGDQCNYSIGRYFGPKVFQWESSRWFNKKAFDQAHAFYERYGGITIVLARFMPFIRTFAPFVGGVAAMGRGKFTAYNVG
GAVLWVVGICTAGYFFGNMAWVQRHLDKIIWAMIFIPGLIAIFGAWRAGRKAQGTAVAIE

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=207, Percent_Identity=53.1400966183575, Blast_Score=215, Evalue=1e-57,
Organism=Escherichia coli, GI1789384, Length=191, Percent_Identity=31.413612565445, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1789481, Length=164, Percent_Identity=32.3170731707317, Blast_Score=96, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24188; Mature: 24188

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVFAFLIDFILHVDKHLAAFVASYGPWVYALLFIIVFVETGVVVMPFLPGDSLLFVVGA
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
LSGAGLMNFPLACAVLLAAAILGDQCNYSIGRYFGPKVFQWESSRWFNKKAFDQAHAFYE
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHH
RYGGITIVLARFMPFIRTFAPFVGGVAAMGRGKFTAYNVGGAVLWVVGICTAGYFFGNMA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
WVQRHLDKIIWAMIFIPGLIAIFGAWRAGRKAQGTAVAIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
>Mature Secondary Structure
MEVFAFLIDFILHVDKHLAAFVASYGPWVYALLFIIVFVETGVVVMPFLPGDSLLFVVGA
CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHH
LSGAGLMNFPLACAVLLAAAILGDQCNYSIGRYFGPKVFQWESSRWFNKKAFDQAHAFYE
HCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCEEEECCCCCCCHHHHHHHHHHHH
RYGGITIVLARFMPFIRTFAPFVGGVAAMGRGKFTAYNVGGAVLWVVGICTAGYFFGNMA
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH
WVQRHLDKIIWAMIFIPGLIAIFGAWRAGRKAQGTAVAIE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]