| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222110056
Identifier: 222110056
GI number: 222110056
Start: 870922
End: 871842
Strand: Direct
Name: 222110056
Synonym: Dtpsy_0842
Alternate gene names: NA
Gene position: 870922-871842 (Clockwise)
Preceding gene: 222110055
Following gene: 222110057
Centisome position: 22.94
GC content: 62.32
Gene sequence:
>921_bases ATGTATGTCGATCAGACAACGCGGGGGTGTGGCGGAACGTTTCAGCGGGAGTTCAGCGCGCAGCACGACGGAAAGTGGTA TCACTACGGCACTCTCACGCTGACGGGTGGTACCTGCAACCTCGTAGAAGGCGCCACTGGAGAGAACCCGGACGGCACCA CGCCCACGGACGCTGCCCCGCCTGCTGATGATCGCAAGTGTCCCAATGGCTTCCCTGGCACGGTGAACGGCATTGAAACC TGCGTTCCGTATTCCGGTCAGAACGGTGTGGGCGTTTCCGGTGGCACGACGACGACAACGAACCCCGATGGCAGCACCAC CACGACAACGACGCAGGGGCAGACTTCGTGCACTGGTGCTTCGTGCACCACCACAACCACCACGACGACGACAACCGGTG GCGGCACGCCGTCTACGACGACCACCAGCACTACGACCACGCGCAATGAGTTCTGCCGCAAGAACCCGACGGACCCCGTG TGCACGGGGTCGGCTACCGGTGGCGGGGGTACTGGTGATGGTGACGAGAAAGCGTCCAGCTTTGGCGGCTCCTGCGGCGC CTGGACATGCGAAGGCGATGCGATCCATTGCGCGATAGCCAAAGAGCAGCATCAGCGTGCCTGCAAGCTCATTGACGATC ACACCAGCCAAGAGGCGCAGCTGTACGCCAGCAGCAAGGGTAAGGACGGCAACGTCACGGCAGATCTGCCGGGTAACTCG TCGCTGAGCTTCGGCGCCGAACACTACGACTCCACTGCGCTGCTCGGCGGCGGCTCGTGCGTGTCGGACCTCAGTGTGGA AGTGTTCGGGAACGTGGTCTCCCTGCCGGTCAGCAACGTCTGTCCCTATGTCCAATGGCTGCGCATCATCCTGCTGGCCA TCGGCGCTTTGTTGTGGATGGTCATCGTGTTCAAGGGGTAA
Upstream 100 bases:
>100_bases GGTTGCTGAGTACTGCGCTTCTCTACCCGGAGCGCAGCATTCCAATCAGGAGGTGGTGACGGGTAGCAGTGCGCCGCCCT CTGTGGGCTGCACGCCGACG
Downstream 100 bases:
>100_bases GCATGCCGGCGTTTCTCGCAATGCTGCTGGGTGGTCTGATCAACGTGGCGGGCACCATCGCCGGCCGCGTGTTGATCGGC TTGGGCATCAGCGTCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MYVDQTTRGCGGTFQREFSAQHDGKWYHYGTLTLTGGTCNLVEGATGENPDGTTPTDAAPPADDRKCPNGFPGTVNGIET CVPYSGQNGVGVSGGTTTTTNPDGSTTTTTTQGQTSCTGASCTTTTTTTTTTGGGTPSTTTTSTTTTRNEFCRKNPTDPV CTGSATGGGGTGDGDEKASSFGGSCGAWTCEGDAIHCAIAKEQHQRACKLIDDHTSQEAQLYASSKGKDGNVTADLPGNS SLSFGAEHYDSTALLGGGSCVSDLSVEVFGNVVSLPVSNVCPYVQWLRIILLAIGALLWMVIVFKG
Sequences:
>Translated_306_residues MYVDQTTRGCGGTFQREFSAQHDGKWYHYGTLTLTGGTCNLVEGATGENPDGTTPTDAAPPADDRKCPNGFPGTVNGIET CVPYSGQNGVGVSGGTTTTTNPDGSTTTTTTQGQTSCTGASCTTTTTTTTTTGGGTPSTTTTSTTTTRNEFCRKNPTDPV CTGSATGGGGTGDGDEKASSFGGSCGAWTCEGDAIHCAIAKEQHQRACKLIDDHTSQEAQLYASSKGKDGNVTADLPGNS SLSFGAEHYDSTALLGGGSCVSDLSVEVFGNVVSLPVSNVCPYVQWLRIILLAIGALLWMVIVFKG >Mature_306_residues MYVDQTTRGCGGTFQREFSAQHDGKWYHYGTLTLTGGTCNLVEGATGENPDGTTPTDAAPPADDRKCPNGFPGTVNGIET CVPYSGQNGVGVSGGTTTTTNPDGSTTTTTTQGQTSCTGASCTTTTTTTTTTGGGTPSTTTTSTTTTRNEFCRKNPTDPV CTGSATGGGGTGDGDEKASSFGGSCGAWTCEGDAIHCAIAKEQHQRACKLIDDHTSQEAQLYASSKGKDGNVTADLPGNS SLSFGAEHYDSTALLGGGSCVSDLSVEVFGNVVSLPVSNVCPYVQWLRIILLAIGALLWMVIVFKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31311; Mature: 31311
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVDQTTRGCGGTFQREFSAQHDGKWYHYGTLTLTGGTCNLVEGATGENPDGTTPTDAAP CCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCC PADDRKCPNGFPGTVNGIETCVPYSGQNGVGVSGGTTTTTNPDGSTTTTTTQGQTSCTGA CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC SCTTTTTTTTTTGGGTPSTTTTSTTTTRNEFCRKNPTDPVCTGSATGGGGTGDGDEKASS CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHH FGGSCGAWTCEGDAIHCAIAKEQHQRACKLIDDHTSQEAQLYASSKGKDGNVTADLPGNS CCCCCCCEEECCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCC SLSFGAEHYDSTALLGGGSCVSDLSVEVFGNVVSLPVSNVCPYVQWLRIILLAIGALLWM CCCCCHHHCCCEEEECCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH VIVFKG HHHCCC >Mature Secondary Structure MYVDQTTRGCGGTFQREFSAQHDGKWYHYGTLTLTGGTCNLVEGATGENPDGTTPTDAAP CCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEECCEEEEECCCCCCCCCCCCCCCCCC PADDRKCPNGFPGTVNGIETCVPYSGQNGVGVSGGTTTTTNPDGSTTTTTTQGQTSCTGA CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCC SCTTTTTTTTTTGGGTPSTTTTSTTTTRNEFCRKNPTDPVCTGSATGGGGTGDGDEKASS CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEECCCCCCCCCCCCHHHHHH FGGSCGAWTCEGDAIHCAIAKEQHQRACKLIDDHTSQEAQLYASSKGKDGNVTADLPGNS CCCCCCCEEECCCEEEEEECHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCC SLSFGAEHYDSTALLGGGSCVSDLSVEVFGNVVSLPVSNVCPYVQWLRIILLAIGALLWM CCCCCHHHCCCEEEECCCCHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHHHHHH VIVFKG HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA