Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222110053

Identifier: 222110053

GI number: 222110053

Start: 869324

End: 869650

Strand: Direct

Name: 222110053

Synonym: Dtpsy_0839

Alternate gene names: NA

Gene position: 869324-869650 (Clockwise)

Preceding gene: 222110052

Following gene: 222110054

Centisome position: 22.9

GC content: 66.97

Gene sequence:

>327_bases
ATGAACGCACCCGCCACCGCATCCCCATCCCAGGGAACCCGCGCACCTGCTCCCATGCAAGTGGTGATCAAGGGCCGCAT
CGACGCCGCGCGCCGCCACGACAAGACCACGTACACGCGCATCGTCACGCCTGCGCCCGATCCGTACAGCCGTCCCCAGA
CCGTTGAAGTGCGTAGCCGCCAGCGCCTGGGCCAGGCTGGCGACGAAATCACCGTGCAGGCCCAGCTCGGCGGCTACACG
CGCAAGCCGTTTCGCAGCACCGACAAGGAAACGGGCGAAGTGACCATGGTCACCCCGGTGGACTTGACCCTGGACGCCGT
CGAATGA

Upstream 100 bases:

>100_bases
TTGCGCGCGGATCGCCGCTTCTGCCACCTCCCGGCGCGGAATCGGCCTGAGTACCACGTCAGCCGGGACCTGTTGCGGCT
TGCCGCTTGAAAGTTGAACC

Downstream 100 bases:

>100_bases
CCGCGCAACAGATGCTCATCCTCGCCATTGTTGGCGGCTTGGCTGGGGGCGTGCTGTGGAGTGCGTTCACGGCTTGCGCA
AATGTATTGGCAGCCAGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MNAPATASPSQGTRAPAPMQVVIKGRIDAARRHDKTTYTRIVTPAPDPYSRPQTVEVRSRQRLGQAGDEITVQAQLGGYT
RKPFRSTDKETGEVTMVTPVDLTLDAVE

Sequences:

>Translated_108_residues
MNAPATASPSQGTRAPAPMQVVIKGRIDAARRHDKTTYTRIVTPAPDPYSRPQTVEVRSRQRLGQAGDEITVQAQLGGYT
RKPFRSTDKETGEVTMVTPVDLTLDAVE
>Mature_108_residues
MNAPATASPSQGTRAPAPMQVVIKGRIDAARRHDKTTYTRIVTPAPDPYSRPQTVEVRSRQRLGQAGDEITVQAQLGGYT
RKPFRSTDKETGEVTMVTPVDLTLDAVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11778; Mature: 11778

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAPATASPSQGTRAPAPMQVVIKGRIDAARRHDKTTYTRIVTPAPDPYSRPQTVEVRSR
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCEEEEEECCCCCCCCCCCEEEHHHH
QRLGQAGDEITVQAQLGGYTRKPFRSTDKETGEVTMVTPVDLTLDAVE
HHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEECC
>Mature Secondary Structure
MNAPATASPSQGTRAPAPMQVVIKGRIDAARRHDKTTYTRIVTPAPDPYSRPQTVEVRSR
CCCCCCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCEEEEEECCCCCCCCCCCEEEHHHH
QRLGQAGDEITVQAQLGGYTRKPFRSTDKETGEVTMVTPVDLTLDAVE
HHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA