Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is 222109999

Identifier: 222109999

GI number: 222109999

Start: 812036

End: 813022

Strand: Direct

Name: 222109999

Synonym: Dtpsy_0784

Alternate gene names: NA

Gene position: 812036-813022 (Clockwise)

Preceding gene: 222109997

Following gene: 222110000

Centisome position: 21.39

GC content: 69.0

Gene sequence:

>987_bases
ATGGCACTGCGCCGCACCCTGCTGTCCACCCTGGCCGCCTGCGCCGCCGCTGCGGCCTTCGCACCCCTGGCGCACGCCCA
GGCGGGCGACTACCCCAACCGCCCCATCAAGCTGATCGTGCCGTTCGCGCCCGGCGGCTCCACCGACATGGTGGCCCGCC
TGCTGGCCGACAAGATGGGGCCCATCCTGGGCAAGGCCGTGGTGGTGGACAACAAGGGCGGAGCCGGCGGCTCCATCGGC
GCAGACGCCATCGCCAAGGCGGCACCGGACGGCTACACCATCGGCATGGCCACGGTGAGCACCCACGGCGCCAACCCCGC
CATCTACGCCAAGCTGCCGTATGACGCGGTGAAGGACTTCGCCCCCATCACCAACGTGATGAGCGTGCCCAGCGTCTTCG
TGGTGCACCCCAGCGTGCCCGCCAAGACCATGCAGGAGTTCGTGGCGCTGGCCAAGGCCAACCCCGGCAAGTACACCTTT
GCCTCGCCAGGCACGGGCTCGCTGGGGCATGCCAACATCGAGAACTTCATGAACCTGGCGGGCATCGACCTGCTGCACAT
CCCCTACAAGGGCGCGGGCCAGGCCGCGACCGATGCGCTGGCGGGCCAGGTCAACGCGATGACGGACAACCTGCCCTCCA
CGCTGGCCAACATCCAGTCGGGCAAGCTGCGCCCGCTGGCCGTGCTGGCCTTGAAGCGCAGCCCCGTGCTGCCCGACGTG
CCCACCTACACCGAGCTGGGCTACGCCGGCATGGGTGACGGCGGGTGGTTCGGCCTGGTGGCGCCCGCGGGCACGCCTAA
GGAGATCATCGCCAAGCTGAACGCCGCCGCGCACAAGGCCATGGCCATGCCCGACTACCTGGAGAAGCAAAAGAGCATCT
CCGGCGAATCCATGGCCAACACGCCCGCGCAGTTTGCCAAGCAGATCGACGCCGCCATCGCGCGCTACACGGCCGTGGCC
AAGCGCGCCAACATCAAGCTGGACTGA

Upstream 100 bases:

>100_bases
GTGTTGGTAATGGATTGCCGCCATTTTGTCGCTTTTCGTAAACGCGGGGGCGCTCAAGAATGGGGCTGCCCCCATTCATT
CAAATACCGAGGAGATCCCC

Downstream 100 bases:

>100_bases
TGGTGCGCCTTTGACTGCGTTGCATGACGACCTGAGCCCCCGGCCGGACACTCCGGTCGAGGTCTGGCAACCCACGGGGC
AGCCGCTGCCGCTGGTGTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MALRRTLLSTLAACAAAAAFAPLAHAQAGDYPNRPIKLIVPFAPGGSTDMVARLLADKMGPILGKAVVVDNKGGAGGSIG
ADAIAKAAPDGYTIGMATVSTHGANPAIYAKLPYDAVKDFAPITNVMSVPSVFVVHPSVPAKTMQEFVALAKANPGKYTF
ASPGTGSLGHANIENFMNLAGIDLLHIPYKGAGQAATDALAGQVNAMTDNLPSTLANIQSGKLRPLAVLALKRSPVLPDV
PTYTELGYAGMGDGGWFGLVAPAGTPKEIIAKLNAAAHKAMAMPDYLEKQKSISGESMANTPAQFAKQIDAAIARYTAVA
KRANIKLD

Sequences:

>Translated_328_residues
MALRRTLLSTLAACAAAAAFAPLAHAQAGDYPNRPIKLIVPFAPGGSTDMVARLLADKMGPILGKAVVVDNKGGAGGSIG
ADAIAKAAPDGYTIGMATVSTHGANPAIYAKLPYDAVKDFAPITNVMSVPSVFVVHPSVPAKTMQEFVALAKANPGKYTF
ASPGTGSLGHANIENFMNLAGIDLLHIPYKGAGQAATDALAGQVNAMTDNLPSTLANIQSGKLRPLAVLALKRSPVLPDV
PTYTELGYAGMGDGGWFGLVAPAGTPKEIIAKLNAAAHKAMAMPDYLEKQKSISGESMANTPAQFAKQIDAAIARYTAVA
KRANIKLD
>Mature_327_residues
ALRRTLLSTLAACAAAAAFAPLAHAQAGDYPNRPIKLIVPFAPGGSTDMVARLLADKMGPILGKAVVVDNKGGAGGSIGA
DAIAKAAPDGYTIGMATVSTHGANPAIYAKLPYDAVKDFAPITNVMSVPSVFVVHPSVPAKTMQEFVALAKANPGKYTFA
SPGTGSLGHANIENFMNLAGIDLLHIPYKGAGQAATDALAGQVNAMTDNLPSTLANIQSGKLRPLAVLALKRSPVLPDVP
TYTELGYAGMGDGGWFGLVAPAGTPKEIIAKLNAAAHKAMAMPDYLEKQKSISGESMANTPAQFAKQIDAAIARYTAVAK
RANIKLD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 33701; Mature: 33570

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRRTLLSTLAACAAAAAFAPLAHAQAGDYPNRPIKLIVPFAPGGSTDMVARLLADKMG
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
PILGKAVVVDNKGGAGGSIGADAIAKAAPDGYTIGMATVSTHGANPAIYAKLPYDAVKDF
HHHCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCHHHHHHH
APITNVMSVPSVFVVHPSVPAKTMQEFVALAKANPGKYTFASPGTGSLGHANIENFMNLA
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHH
GIDLLHIPYKGAGQAATDALAGQVNAMTDNLPSTLANIQSGKLRPLAVLALKRSPVLPDV
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
PTYTELGYAGMGDGGWFGLVAPAGTPKEIIAKLNAAAHKAMAMPDYLEKQKSISGESMAN
CCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
TPAQFAKQIDAAIARYTAVAKRANIKLD
CHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
ALRRTLLSTLAACAAAAAFAPLAHAQAGDYPNRPIKLIVPFAPGGSTDMVARLLADKMG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHC
PILGKAVVVDNKGGAGGSIGADAIAKAAPDGYTIGMATVSTHGANPAIYAKLPYDAVKDF
HHHCCEEEEECCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCCCCCEEEEECCHHHHHHH
APITNVMSVPSVFVVHPSVPAKTMQEFVALAKANPGKYTFASPGTGSLGHANIENFMNLA
HHHHHHHHCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCHHHHHHHH
GIDLLHIPYKGAGQAATDALAGQVNAMTDNLPSTLANIQSGKLRPLAVLALKRSPVLPDV
CCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCC
PTYTELGYAGMGDGGWFGLVAPAGTPKEIIAKLNAAAHKAMAMPDYLEKQKSISGESMAN
CCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCC
TPAQFAKQIDAAIARYTAVAKRANIKLD
CHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]