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The map label for this gene is ybgI [C]

Identifier: 222109964

GI number: 222109964

Start: 778130

End: 778894

Strand: Direct

Name: ybgI [C]

Synonym: Dtpsy_0749

Alternate gene names: 222109964

Gene position: 778130-778894 (Clockwise)

Preceding gene: 222109961

Following gene: 222109965

Centisome position: 20.5

GC content: 68.5

Gene sequence:

>765_bases
ATGTCTCATCCTTCGCATACCGACCGGGACGCGCTGCTGGCGGCCTTTGATGCCGAACTGCAGCCCGAACGCTTCAAGGA
TTACGGGCCCAACGGGCTGCAGGTGGAAGGCAGGCGCGAGATCGCGCGCATCGTCAGCGGAGTCACGGCCAGCCGGGCGC
TGATCGATGCCGCCATTGCCGCGCGGGCCGACGCCATCTTCGTGCACCACGGCTTGTTCTGGCGGGGCATGGACGGCCGC
GTGACCGGCTGGATGAAGCAGCGCCTGCAGCGCCTGCTGGCACACGACATCAATCTGTTTGCCTACCACTTGCCACTGGA
CGCGCATGCGCAGTGGGGTAACAACGCACAACTGGGGCGCGTGCTGGGCTGGCAGCCCGACCAGCGTTTTGGCGAGCAGG
ACCTGGGCTTTGCTGCGCCGGCGGACTTCGCAGATGTGGGTGCGCTGGCCGCGCACGTGCAAGCGGCGCTGGGCCGTGCG
GCTACGGTGGTGGCGCCGGAGCAGGTGCGCCCCATCCGCCGCGTGGCCTGGTGCACGGGCGGCGCGCAAGGGTTCTTCGA
GTCCGCCATCGCCGCGGGGGCGGATGCCTTCATCACCGGCGAGATCTCCGAACAGCAGACCCACCTCGCGCGCGAGACGG
GCGTGGCCTTTATCGCAGCCGGCCACCATGCCACCGAACGCTACGGTGCGCCGGCGCTCGCGGCCCATGTCGCGCAGCGG
TTGGGGTTGGAGCACCGCTTCATCGATATCGACAATCCTGCTTGA

Upstream 100 bases:

>100_bases
TCTAGGAGCGCGTTTGCGCGGGATTTTTTAAGCAGTGTGAAGCATGGGTAAACACGTTTGATGTGGGTCAGCGCAGGGGC
ACATCGCGGACAATTGCCAC

Downstream 100 bases:

>100_bases
TTTTTTGCTACTGAAAGTATAGCTGCTTGCGCTTTATGGTAGAGCGCTAGGGCCCTATTTGATCTATAGGCTTGTTCATG
AATGCACTTCCCGCGCTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSHPSHTDRDALLAAFDAELQPERFKDYGPNGLQVEGRREIARIVSGVTASRALIDAAIAARADAIFVHHGLFWRGMDGR
VTGWMKQRLQRLLAHDINLFAYHLPLDAHAQWGNNAQLGRVLGWQPDQRFGEQDLGFAAPADFADVGALAAHVQAALGRA
ATVVAPEQVRPIRRVAWCTGGAQGFFESAIAAGADAFITGEISEQQTHLARETGVAFIAAGHHATERYGAPALAAHVAQR
LGLEHRFIDIDNPA

Sequences:

>Translated_254_residues
MSHPSHTDRDALLAAFDAELQPERFKDYGPNGLQVEGRREIARIVSGVTASRALIDAAIAARADAIFVHHGLFWRGMDGR
VTGWMKQRLQRLLAHDINLFAYHLPLDAHAQWGNNAQLGRVLGWQPDQRFGEQDLGFAAPADFADVGALAAHVQAALGRA
ATVVAPEQVRPIRRVAWCTGGAQGFFESAIAAGADAFITGEISEQQTHLARETGVAFIAAGHHATERYGAPALAAHVAQR
LGLEHRFIDIDNPA
>Mature_253_residues
SHPSHTDRDALLAAFDAELQPERFKDYGPNGLQVEGRREIARIVSGVTASRALIDAAIAARADAIFVHHGLFWRGMDGRV
TGWMKQRLQRLLAHDINLFAYHLPLDAHAQWGNNAQLGRVLGWQPDQRFGEQDLGFAAPADFADVGALAAHVQAALGRAA
TVVAPEQVRPIRRVAWCTGGAQGFFESAIAAGADAFITGEISEQQTHLARETGVAFIAAGHHATERYGAPALAAHVAQRL
GLEHRFIDIDNPA

Specific function: Unknown

COG id: COG0327

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0135 (NIF3) family [H]

Homologues:

Organism=Escherichia coli, GI1786928, Length=245, Percent_Identity=47.7551020408163, Blast_Score=213, Evalue=1e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002678 [H]

Pfam domain/function: PF01784 NIF3 [H]

EC number: NA

Molecular weight: Translated: 27471; Mature: 27340

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPSHTDRDALLAAFDAELQPERFKDYGPNGLQVEGRREIARIVSGVTASRALIDAAIA
CCCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCEECCHHHHHHHHHCHHHHHHHHHHHHH
ARADAIFVHHGLFWRGMDGRVTGWMKQRLQRLLAHDINLFAYHLPLDAHAQWGNNAQLGR
HHHCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCH
VLGWQPDQRFGEQDLGFAAPADFADVGALAAHVQAALGRAATVVAPEQVRPIRRVAWCTG
HCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCC
GAQGFFESAIAAGADAFITGEISEQQTHLARETGVAFIAAGHHATERYGAPALAAHVAQR
CHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCEEEEEECCHHHHHHCCHHHHHHHHHH
LGLEHRFIDIDNPA
HCCCEEEEECCCCC
>Mature Secondary Structure 
SHPSHTDRDALLAAFDAELQPERFKDYGPNGLQVEGRREIARIVSGVTASRALIDAAIA
CCCCCCCHHHHHHHHCCCCCHHHHHCCCCCCCEECCHHHHHHHHHCHHHHHHHHHHHHH
ARADAIFVHHGLFWRGMDGRVTGWMKQRLQRLLAHDINLFAYHLPLDAHAQWGNNAQLGR
HHHCEEEEECCEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCH
VLGWQPDQRFGEQDLGFAAPADFADVGALAAHVQAALGRAATVVAPEQVRPIRRVAWCTG
HCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHCC
GAQGFFESAIAAGADAFITGEISEQQTHLARETGVAFIAAGHHATERYGAPALAAHVAQR
CHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCEEEEEECCHHHHHHCCHHHHHHHHHH
LGLEHRFIDIDNPA
HCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]