| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109871
Identifier: 222109871
GI number: 222109871
Start: 678563
End: 679012
Strand: Direct
Name: 222109871
Synonym: Dtpsy_0655
Alternate gene names: NA
Gene position: 678563-679012 (Clockwise)
Preceding gene: 222109860
Following gene: 222109875
Centisome position: 17.87
GC content: 76.67
Gene sequence:
>450_bases ATGGTGACAAACACATACGGCCGCTGGGCCCCGCGCCTGGCCACGCTGCTGCTCTGGGCGCTGGCGGGTGCGACCGCTGT CTATTGGGGGTTGAAGCTGTCCGCAAGCCCGGCCGGCACGGCGCCGGCGGCCGCGGCGCCCGAGCCGGTGGTGACCGACA CGCAGGCGCTCGCGCGCCTGCTCGGGGCCAGCCCGGTGCTGGCGGCCGCCGAGGCGGCACCCTCCGCAGCCAGCCGCTTC GTGCTCATGGGCGTGCTGGCCGGCACGGCCAGCGGCGGCGGCGCCGCGCTGATCGCGGTGGACGGCAAGCCGGCCAAGCC CTACCGCGTGGGCGCGAATGTGGAGCCGGGGCTGGTGCTGCAGTCCCTGGGCAAGGGCGCCGCGCGGCTGGGGGCGTCGA TGGACGGCGCCACGACGCTGGCGCTGGAGATGCCGCGCAAGCGGCCCTGA
Upstream 100 bases:
>100_bases GACAGGCGGCGGCGGGCGCGTTGCGCGAGGGAGGAAGGGCTGGGCTGCATCTCGAAGCGGCGACTCGGAATGGACATATC CGGTCAATCATAATCGTGCA
Downstream 100 bases:
>100_bases CCCGGCGGGGATCCCGCGCCGGCGGGGGACTGCATATCCGACGGGAGCGCCCATAACCTAACCGCGCGCCGGTGCTGCCT GCGGTCGGCCTTTCAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MVTNTYGRWAPRLATLLLWALAGATAVYWGLKLSASPAGTAPAAAAPEPVVTDTQALARLLGASPVLAAAEAAPSAASRF VLMGVLAGTASGGGAALIAVDGKPAKPYRVGANVEPGLVLQSLGKGAARLGASMDGATTLALEMPRKRP
Sequences:
>Translated_149_residues MVTNTYGRWAPRLATLLLWALAGATAVYWGLKLSASPAGTAPAAAAPEPVVTDTQALARLLGASPVLAAAEAAPSAASRF VLMGVLAGTASGGGAALIAVDGKPAKPYRVGANVEPGLVLQSLGKGAARLGASMDGATTLALEMPRKRP >Mature_149_residues MVTNTYGRWAPRLATLLLWALAGATAVYWGLKLSASPAGTAPAAAAPEPVVTDTQALARLLGASPVLAAAEAAPSAASRF VLMGVLAGTASGGGAALIAVDGKPAKPYRVGANVEPGLVLQSLGKGAARLGASMDGATTLALEMPRKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14772; Mature: 14772
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTNTYGRWAPRLATLLLWALAGATAVYWGLKLSASPAGTAPAAAAPEPVVTDTQALARL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LGASPVLAAAEAAPSAASRFVLMGVLAGTASGGGAALIAVDGKPAKPYRVGANVEPGLVL HCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH QSLGKGAARLGASMDGATTLALEMPRKRP HHHCCHHHHHCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MVTNTYGRWAPRLATLLLWALAGATAVYWGLKLSASPAGTAPAAAAPEPVVTDTQALARL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCHHHHHHH LGASPVLAAAEAAPSAASRFVLMGVLAGTASGGGAALIAVDGKPAKPYRVGANVEPGLVL HCCCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEECCCCCCCHHH QSLGKGAARLGASMDGATTLALEMPRKRP HHHCCHHHHHCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA