| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is 222109822
Identifier: 222109822
GI number: 222109822
Start: 626055
End: 626771
Strand: Direct
Name: 222109822
Synonym: Dtpsy_0606
Alternate gene names: NA
Gene position: 626055-626771 (Clockwise)
Preceding gene: 222109821
Following gene: 222109823
Centisome position: 16.49
GC content: 68.2
Gene sequence:
>717_bases ATGCGTTACCGACTGCTGCGCCGCCGCCTCACGATCTCCGCTCCGCGCGTCACCGTGCGCAGCGCGCTTCCGTGGCCGCT GCGCTGGGCGGCCGTGGCCATCGTCCTGGGCCTGTGCGCGGCCATGACGCTGTGGGCCTTCGACCTGGGCAAACGGATCG CCGGGCTGGACGCGGGCAGCCGGGAGGAATTGCAGCGCCTTCGTGCAGAGGTGTCGCAGTTGCGCGAGCACAACCGTCTC CAGCACGAAAAGCAGGAAGCCGCGGGCAGCCTGCGCATAGCCGAGCAGGCGGCCATGGATCGCCTGCTGGAGCAACTGCG GCAACTCGAAGCCGACAACCGTAGCCTGCGGGAGGACCTGGGCTTCTTCGAGAAGCTGACCCCCACCGGCAAGCCTGGCA ACCTGACCATCCGCGGGCTGCACGCCGAGACTTTGGAGGGAGGTGGGCAGTTGCGCTGGCAGGTGCTGGCCATGCAGCCC ATGCGCAATGCGCCGGAATTCAAGGGCCGGCTGGAACTGCTGCTGGCGGGCACGCTGAACGGGGCGGAGTGGTCCTCCAC GTCTCCAGCGGTCATCCAGCCGCTTCAGTTCCGGCAGTACCGGCGGGTTCAGGGCGTGGCGGCCCTGCCGCCGGGCGCCA TGGTAAAAACCGTGACCGCGCGCTTGATGGATGGAACCTCGTTGCGCGCCGCCCAGACTTTTTCACTGGAGCCATAG
Upstream 100 bases:
>100_bases GCGTGCTGCAGACTGCAGAAACCGCCCTTCGGGGCGGTTTTTTGTTTTTGGGCGTTGCCGCGGGCGGCGACCATCCCACT GAAAGAAACGTGCACTGCCC
Downstream 100 bases:
>100_bases GGCCCGGCTGCGGACCCGCATGGCAATGACTACTACACCCCGAGGGAATACCACATGTTTTCGCGCAAGAAGCCACCCCC GATCAAGAGCCTGATTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Signal Peptide; Exported Protein
Number of amino acids: Translated: 238; Mature: 238
Protein sequence:
>238_residues MRYRLLRRRLTISAPRVTVRSALPWPLRWAAVAIVLGLCAAMTLWAFDLGKRIAGLDAGSREELQRLRAEVSQLREHNRL QHEKQEAAGSLRIAEQAAMDRLLEQLRQLEADNRSLREDLGFFEKLTPTGKPGNLTIRGLHAETLEGGGQLRWQVLAMQP MRNAPEFKGRLELLLAGTLNGAEWSSTSPAVIQPLQFRQYRRVQGVAALPPGAMVKTVTARLMDGTSLRAAQTFSLEP
Sequences:
>Translated_238_residues MRYRLLRRRLTISAPRVTVRSALPWPLRWAAVAIVLGLCAAMTLWAFDLGKRIAGLDAGSREELQRLRAEVSQLREHNRL QHEKQEAAGSLRIAEQAAMDRLLEQLRQLEADNRSLREDLGFFEKLTPTGKPGNLTIRGLHAETLEGGGQLRWQVLAMQP MRNAPEFKGRLELLLAGTLNGAEWSSTSPAVIQPLQFRQYRRVQGVAALPPGAMVKTVTARLMDGTSLRAAQTFSLEP >Mature_238_residues MRYRLLRRRLTISAPRVTVRSALPWPLRWAAVAIVLGLCAAMTLWAFDLGKRIAGLDAGSREELQRLRAEVSQLREHNRL QHEKQEAAGSLRIAEQAAMDRLLEQLRQLEADNRSLREDLGFFEKLTPTGKPGNLTIRGLHAETLEGGGQLRWQVLAMQP MRNAPEFKGRLELLLAGTLNGAEWSSTSPAVIQPLQFRQYRRVQGVAALPPGAMVKTVTARLMDGTSLRAAQTFSLEP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26594; Mature: 26594
Theoretical pI: Translated: 11.44; Mature: 11.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYRLLRRRLTISAPRVTVRSALPWPLRWAAVAIVLGLCAAMTLWAFDLGKRIAGLDAGS CCHHHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC REELQRLRAEVSQLREHNRLQHEKQEAAGSLRIAEQAAMDRLLEQLRQLEADNRSLREDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GFFEKLTPTGKPGNLTIRGLHAETLEGGGQLRWQVLAMQPMRNAPEFKGRLELLLAGTLN HHHHHCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEECCCCCCCCHHCCEEEEEEECCC GAEWSSTSPAVIQPLQFRQYRRVQGVAALPPGAMVKTVTARLMDGTSLRAAQTFSLEP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MRYRLLRRRLTISAPRVTVRSALPWPLRWAAVAIVLGLCAAMTLWAFDLGKRIAGLDAGS CCHHHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC REELQRLRAEVSQLREHNRLQHEKQEAAGSLRIAEQAAMDRLLEQLRQLEADNRSLREDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH GFFEKLTPTGKPGNLTIRGLHAETLEGGGQLRWQVLAMQPMRNAPEFKGRLELLLAGTLN HHHHHCCCCCCCCCEEEEECCHHHHCCCCCEEEEEEEECCCCCCCCHHCCEEEEEEECCC GAEWSSTSPAVIQPLQFRQYRRVQGVAALPPGAMVKTVTARLMDGTSLRAAQTFSLEP CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA