Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

Click here to switch to the map view.

The map label for this gene is 222109788

Identifier: 222109788

GI number: 222109788

Start: 592116

End: 592550

Strand: Direct

Name: 222109788

Synonym: Dtpsy_0572

Alternate gene names: NA

Gene position: 592116-592550 (Clockwise)

Preceding gene: 222109787

Following gene: 222109789

Centisome position: 15.6

GC content: 65.29

Gene sequence:

>435_bases
ATGAGACAAGCGCTAGCAGCTATTATTTTTGCAGCAATCGCGGCCCCTGCATGGGCCCAGATGTCCCCCGTGGGCCTGTG
GCGCAGCGTGGACGACAAGACGGGCGAGGCCAAGGCCGAGATCCGTATTGCCGAAACCAGCGGCGTGCTGAACGGCCGCA
TCGAGAAGTCCCTCAAAAAGGACGCCGACCCTGCTGCCACCTGCACCGAGTGCAAGGACGACCGCAAGGGCAAGGCGATC
GCGGGTCTGGAGATCATCCGCGGCGTCAAGAAGGCCGATGACCGCGAGGTCTGGGAGGGCGGCAAGATCCTCGACCCCGA
AAACGGCAAGGAATACCGCGCCAGCCTGACCCCCATCGAGGGCGGCAAGCGGCTGGAGGTGCGCGGCTTCCTGGGCCCGT
TCTGGCGCACCCAGACCTGGCAGCGCGTGCAGTAA

Upstream 100 bases:

>100_bases
CGCGCCGGCAGCAAGGTGCTCATGGACACCGACGCCGCCCTGGCCTGAGCCAGCAATTGCACGCATTGCCAATTTTGAAC
GTTATTGCACTGGAGGCCTT

Downstream 100 bases:

>100_bases
GCAAAGCAGTGAGCGCCACGGCGCCGCAGCCGGCCCGCCCGCGTGGCACGGGGCCTGGCGCGCGGCCCCGTGCGCATCCC
ACCATCCAAGGAACAAGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MRQALAAIIFAAIAAPAWAQMSPVGLWRSVDDKTGEAKAEIRIAETSGVLNGRIEKSLKKDADPAATCTECKDDRKGKAI
AGLEIIRGVKKADDREVWEGGKILDPENGKEYRASLTPIEGGKRLEVRGFLGPFWRTQTWQRVQ

Sequences:

>Translated_144_residues
MRQALAAIIFAAIAAPAWAQMSPVGLWRSVDDKTGEAKAEIRIAETSGVLNGRIEKSLKKDADPAATCTECKDDRKGKAI
AGLEIIRGVKKADDREVWEGGKILDPENGKEYRASLTPIEGGKRLEVRGFLGPFWRTQTWQRVQ
>Mature_144_residues
MRQALAAIIFAAIAAPAWAQMSPVGLWRSVDDKTGEAKAEIRIAETSGVLNGRIEKSLKKDADPAATCTECKDDRKGKAI
AGLEIIRGVKKADDREVWEGGKILDPENGKEYRASLTPIEGGKRLEVRGFLGPFWRTQTWQRVQ

Specific function: Unknown

COG id: COG4731

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15849; Mature: 15849

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQALAAIIFAAIAAPAWAQMSPVGLWRSVDDKTGEAKAEIRIAETSGVLNGRIEKSLKK
CHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHC
DADPAATCTECKDDRKGKAIAGLEIIRGVKKADDREVWEGGKILDPENGKEYRASLTPIE
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCEECCCCCCCEEEECCCCC
GGKRLEVRGFLGPFWRTQTWQRVQ
CCCEEEEECCCCCHHCCCCCCCCC
>Mature Secondary Structure
MRQALAAIIFAAIAAPAWAQMSPVGLWRSVDDKTGEAKAEIRIAETSGVLNGRIEKSLKK
CHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHC
DADPAATCTECKDDRKGKAIAGLEIIRGVKKADDREVWEGGKILDPENGKEYRASLTPIE
CCCCCCHHHHCCCCCCCCCHHHHHHHHHHHCCCCCHHHCCCCEECCCCCCCEEEECCCCC
GGKRLEVRGFLGPFWRTQTWQRVQ
CCCEEEEECCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA