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The map label for this gene is ssuC [C]

Identifier: 222109730

GI number: 222109730

Start: 530729

End: 531631

Strand: Direct

Name: ssuC [C]

Synonym: Dtpsy_0514

Alternate gene names: 222109730

Gene position: 530729-531631 (Clockwise)

Preceding gene: 222109729

Following gene: 222109731

Centisome position: 13.98

GC content: 69.66

Gene sequence:

>903_bases
ATGAGCCTTCCAACCTCTTCCGTCTCCGCGGCGCCCTTCGCGCTGCACCCGCCCGTGCGCCCCGAAGTGCTGCACACCCT
GCCCCCGCTCGGACGCGTGGCGCCCGCGCAGCCGCTGCCGCTGGGCCGCCGCCTCTGGCAGCAGGGCGCGCTGCGCAAGG
CGCTTATCCTCGCCGTGCTGGCGCTGCTGTGGGAAGGCGTTGCGCGCTGGCAGGACAACGACCTGCTGCTGCCCACCTTC
CTGCAGACCGCGCAGGCCTTCGCACAGGGCGTGGCTTCGGGCGAGCTGCTGCACAAGACGGCACTGTCGCTGGCCGTGCT
GCTCAAGGGCTACCTCGCGGGCATCGCCTGTGCCTTCGTGCTCACCACGCTGGCCGTGTCCACGCAGTTGGGACGCGACC
TGCTGTCCACGCTGACGGCCATGTTCAACCCGCTGCCGGCGATCGCGCTGCTGCCGCTGGCGCTGCTGTGGTTCGGCCTG
GGGCAGGGCAGCCTGGTCTTCGTGCTGGTGCATTCCGTGCTGTGGCCGCTGGCGCTCAACACCTACGCGGGCTTTCAAGG
CGTGCCCGAAACGCTGCGCATGGCGGGGCGCAACTACGGCCTGAAGGGCCTGCGCTACGTGTTGCAACTGCTGGTGCCCG
CGGCGCTGCCGTCCATCCTGTCGGGGTTGAAGATCGGCTGGGCCTTCGCCTGGCGCACGCTGATCGCGGCGGAACTGGTG
TTCGGCGCGTCTTCGGGGCAGGGCGGCCTGGGCTGGTACATCTTCCAGAACCGCAATGAGCTCTACACAGACAAGGTCTT
CGCGGGCCTCGCCATGGTGATCGCCATCGGCCTGGCGGTGGAGAACCTGGGCTTTCACACGCTGGAGCGCCTGACGGTGC
GACGCTGGGGCGTGCAGCGCTAG

Upstream 100 bases:

>100_bases
GCGGGTGCATGCGCTGCTGTTCGATGAGCCTGTGCACGGCGCCGCACCTTCCGATGCCCCGCACGCGCCTGTTCCGCCCA
CCTTCGCCTGACCTCTGCCC

Downstream 100 bases:

>100_bases
GGCCGGTGAACACTAGGGAAGGGGATCGCGTTGCCTCGCAAAGGGGGTGGATGCAAGGCGCTTGCGCGCCGCAAGGCTCG
TGCCTTGCAAGCGCGGGCAA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 299

Protein sequence:

>300_residues
MSLPTSSVSAAPFALHPPVRPEVLHTLPPLGRVAPAQPLPLGRRLWQQGALRKALILAVLALLWEGVARWQDNDLLLPTF
LQTAQAFAQGVASGELLHKTALSLAVLLKGYLAGIACAFVLTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGL
GQGSLVFVLVHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQLLVPAALPSILSGLKIGWAFAWRTLIAAELV
FGASSGQGGLGWYIFQNRNELYTDKVFAGLAMVIAIGLAVENLGFHTLERLTVRRWGVQR

Sequences:

>Translated_300_residues
MSLPTSSVSAAPFALHPPVRPEVLHTLPPLGRVAPAQPLPLGRRLWQQGALRKALILAVLALLWEGVARWQDNDLLLPTF
LQTAQAFAQGVASGELLHKTALSLAVLLKGYLAGIACAFVLTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGL
GQGSLVFVLVHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQLLVPAALPSILSGLKIGWAFAWRTLIAAELV
FGASSGQGGLGWYIFQNRNELYTDKVFAGLAMVIAIGLAVENLGFHTLERLTVRRWGVQR
>Mature_299_residues
SLPTSSVSAAPFALHPPVRPEVLHTLPPLGRVAPAQPLPLGRRLWQQGALRKALILAVLALLWEGVARWQDNDLLLPTFL
QTAQAFAQGVASGELLHKTALSLAVLLKGYLAGIACAFVLTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLG
QGSLVFVLVHSVLWPLALNTYAGFQGVPETLRMAGRNYGLKGLRYVLQLLVPAALPSILSGLKIGWAFAWRTLIAAELVF
GASSGQGGLGWYIFQNRNELYTDKVFAGLAMVIAIGLAVENLGFHTLERLTVRRWGVQR

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=219, Percent_Identity=31.0502283105023, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1786564, Length=248, Percent_Identity=31.4516129032258, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32339; Mature: 32208

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPTSSVSAAPFALHPPVRPEVLHTLPPLGRVAPAQPLPLGRRLWQQGALRKALILAVL
CCCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
ALLWEGVARWQDNDLLLPTFLQTAQAFAQGVASGELLHKTALSLAVLLKGYLAGIACAFV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LTTLAVSTQLGRDLLSTLTAMFNPLPAIALLPLALLWFGLGQGSLVFVLVHSVLWPLALN
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
TYAGFQGVPETLRMAGRNYGLKGLRYVLQLLVPAALPSILSGLKIGWAFAWRTLIAAELV
HHHCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FGASSGQGGLGWYIFQNRNELYTDKVFAGLAMVIAIGLAVENLGFHTLERLTVRRWGVQR
HCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLPTSSVSAAPFALHPPVRPEVLHTLPPLGRVAPAQPLPLGRRLWQQGALRKALILAVL
CCCCCCCCCCCEEECCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH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PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]