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The map label for this gene is yraP [C]

Identifier: 222109628

GI number: 222109628

Start: 413334

End: 414008

Strand: Direct

Name: yraP [C]

Synonym: Dtpsy_0408

Alternate gene names: 222109628

Gene position: 413334-414008 (Clockwise)

Preceding gene: 222109627

Following gene: 222109633

Centisome position: 10.89

GC content: 70.37

Gene sequence:

>675_bases
ATGACATTTCCCCTGCTGCGAATTTCTAGCGCCGCGCTCGCGGCCGCGGCCCTGGCCGGCAGCCTCGCCGGCTGCGCGCC
GCTGGTCATCGGCGGCGGTGCCGTGGTCGGCACCCTGATGGCGACCGACCGGCGCACCACCGGCACCCAGGTGGAGGACG
AAGGCATCGAGATGCGCACCGCCAGCCGCATCCGTGAGACCCTGGGCGACCGCGTGCACGTGAACGTGACCAGCTACAAC
CGCCAGGTGCTGCTGACGGGCGAAGTGCCCACGGCCGCCGACGGCCAGAAGGTGGAGCAGATCGCGCAAGGCGTGGACAA
CGTGCGCTCGGTGGTCAACGACCTGGGCGTGATGCCCGCGTCCTCGCTGACGCAGCGCTCGCGCGACGCCTTCATCTCGA
CCAAGGTGCGCGCGAGCCTCGTGGACGCCAAGGACCTGTCTGCCAATGCGTTCAAGGTCGTCACCGAGCGCGACGTGGTG
TACCTGATGGGCCGTGTCACGCAGCGCGAAGCCAAGCGCTCCGCGGAGATCGCGCGCGGCGTGGATGGCGTACGCAAGGT
CGTGCGCGTGTTCGAGGTGATCTCCGAAGAGGAACTGATCCGCGGTGGCGCGGCGCAGCAGCCCGCGCCCGTCTCGCAGG
ACCCCGCCGCGGCGGCGCAGCCAGTCAAGCCCTGA

Upstream 100 bases:

>100_bases
ACGACCGAGCCGCCCGTGTGCGCGAGGTGCATGCGCTGGTGCTGCACTGCCTGTGCGACGGCGTGGACGCCCAGTTACTT
GGAGAACAGGAGATTCCTCT

Downstream 100 bases:

>100_bases
GCACGGGCTGCTCGCGCCGAACAGGTCGGCACCATCCGCGCCTTGTGACAGGTGATTGAACCACTGCCCGCCCTGCGCGG
GCAGTGCGTCTGGGGCCTCA

Product: transport-associated protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 223

Protein sequence:

>224_residues
MTFPLLRISSAALAAAALAGSLAGCAPLVIGGGAVVGTLMATDRRTTGTQVEDEGIEMRTASRIRETLGDRVHVNVTSYN
RQVLLTGEVPTAADGQKVEQIAQGVDNVRSVVNDLGVMPASSLTQRSRDAFISTKVRASLVDAKDLSANAFKVVTERDVV
YLMGRVTQREAKRSAEIARGVDGVRKVVRVFEVISEEELIRGGAAQQPAPVSQDPAAAAQPVKP

Sequences:

>Translated_224_residues
MTFPLLRISSAALAAAALAGSLAGCAPLVIGGGAVVGTLMATDRRTTGTQVEDEGIEMRTASRIRETLGDRVHVNVTSYN
RQVLLTGEVPTAADGQKVEQIAQGVDNVRSVVNDLGVMPASSLTQRSRDAFISTKVRASLVDAKDLSANAFKVVTERDVV
YLMGRVTQREAKRSAEIARGVDGVRKVVRVFEVISEEELIRGGAAQQPAPVSQDPAAAAQPVKP
>Mature_223_residues
TFPLLRISSAALAAAALAGSLAGCAPLVIGGGAVVGTLMATDRRTTGTQVEDEGIEMRTASRIRETLGDRVHVNVTSYNR
QVLLTGEVPTAADGQKVEQIAQGVDNVRSVVNDLGVMPASSLTQRSRDAFISTKVRASLVDAKDLSANAFKVVTERDVVY
LMGRVTQREAKRSAEIARGVDGVRKVVRVFEVISEEELIRGGAAQQPAPVSQDPAAAAQPVKP

Specific function: Unknown

COG id: COG2823

COG function: function code R; Predicted periplasmic or secreted lipoprotein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 BON domains [H]

Homologues:

Organism=Escherichia coli, GI1789540, Length=175, Percent_Identity=40.5714285714286, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007055
- InterPro:   IPR014004 [H]

Pfam domain/function: PF04972 BON [H]

EC number: NA

Molecular weight: Translated: 23620; Mature: 23489

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50914 BON

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFPLLRISSAALAAAALAGSLAGCAPLVIGGGAVVGTLMATDRRTTGTQVEDEGIEMRT
CCCCHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
ASRIRETLGDRVHVNVTSYNRQVLLTGEVPTAADGQKVEQIAQGVDNVRSVVNDLGVMPA
HHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SSLTQRSRDAFISTKVRASLVDAKDLSANAFKVVTERDVVYLMGRVTQREAKRSAEIARG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHH
VDGVRKVVRVFEVISEEELIRGGAAQQPAPVSQDPAAAAQPVKP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TFPLLRISSAALAAAALAGSLAGCAPLVIGGGAVVGTLMATDRRTTGTQVEDEGIEMRT
CCCHHHHHHHHHHHHHHHHHHCCCHHHEECCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
ASRIRETLGDRVHVNVTSYNRQVLLTGEVPTAADGQKVEQIAQGVDNVRSVVNDLGVMPA
HHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
SSLTQRSRDAFISTKVRASLVDAKDLSANAFKVVTERDVVYLMGRVTQREAKRSAEIARG
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHHHHHH
VDGVRKVVRVFEVISEEELIRGGAAQQPAPVSQDPAAAAQPVKP
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]