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The map label for this gene is arnC [H]

Identifier: 222109623

GI number: 222109623

Start: 409183

End: 410214

Strand: Direct

Name: arnC [H]

Synonym: Dtpsy_0403

Alternate gene names: 222109623

Gene position: 409183-410214 (Clockwise)

Preceding gene: 222109619

Following gene: 222109624

Centisome position: 10.78

GC content: 67.34

Gene sequence:

>1032_bases
ATGAACACCGCCCCTACTCCAGCGCCCGACGTCTCCATCGTGGTGCCGATCTACAACGAGGTCGAGAACTTGCCCGACCT
CGTGGAGCGCATCGCGCAGGCGATGTCCGCGCAGCCGCTCAGCTTCGAACTGCTGGCGGTGGACGACGGCTCGCGCGACG
GCAGCGCCGACACGCTGCGTGAACTGGCGGCCACGCGCCCCTGGTTGCGCCCGGTGTTCCTGGCACGCAACTACGGCCAG
TCGAGCGCCCTGCAGGCGGGTTTCGATCGCGTGCGCGGCCGCTATGTGGTGACGCTGGATGCCGATCTGCAGAACGAACC
CGCCGACATTCCGCTGCTGCTGGAGCGCCTGGAGAACGACTCCAGCGTGGACATGGTCAGCGGCTGGCGCAAGGACCGGC
AGGACGCGGAGCTGTCGCGCAAGCTGCCCTCGCGCATCGCCAACCGGCTGATCTCCAGCGCCACGGGCGTGCACCTGCAC
GACTACGGCTGCGCGCTCAAGGCCTATCGACGGCCCATCATCGACCGGATCCGCCTCTACGGCGAGCTGCACCGGTTCAT
CCCGTCGCTGGCCAAGGAGGCGGGCGCGCGCATCACGGAAGTGCCGGTGCGCCACCATGCGCGCACCCGCGGCGTGTCCA
AGTACGGCATCGACCGCACCTTCCGCGTCATCCTGGACCTGATCCTCATCGTCTTCTTCATGCGCTACCGCCAGCGCCCG
CTGCATGCCTTTGGCGGGCTGGGGCTGTGGCTGGCTGCGCCGGGCGTGCTGATCCTGGCCTGGCTGCTGCTGCAGAAAGT
GCTGGGCGAGGACATCGGCGGCCGGCCGCTGCTGCTTGCCGGCGTCATGCTGGTGCTGATGGGCGTGCAGATGGTGGTGG
CGGGCCTGATCGGCGAGCTGCTGATGCGCATCTACCACGAGGCCGGCGGGGCACCGCAGTTCCATGCGCAGGAATATGTG
CCGGATTCAAGAGTAAATATGCCTGCGGCGCGCGACCAGAAAGCGCAAGCAGCTACTAATAACATAGCGTGA

Upstream 100 bases:

>100_bases
AAGTAGCGCACTGTGTGCGTCCGGCGGGCGCGAACGCGCGGGGCGCGCGAGGCACGCGAGGCACAATCGCAGCCATTATC
CCGCTACAACTGTTTCCTTG

Downstream 100 bases:

>100_bases
AGCGTCCGTTCAAGGCCATGCTGCGCGGCCTGGTGGGCCTGGCCCTGCTGGGCGCGGTGGTGGCGCTGGCCGATCCGGCC
CGCGTGTGGAGCCAACTGCG

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MNTAPTPAPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFELLAVDDGSRDGSADTLRELAATRPWLRPVFLARNYGQ
SSALQAGFDRVRGRYVVTLDADLQNEPADIPLLLERLENDSSVDMVSGWRKDRQDAELSRKLPSRIANRLISSATGVHLH
DYGCALKAYRRPIIDRIRLYGELHRFIPSLAKEAGARITEVPVRHHARTRGVSKYGIDRTFRVILDLILIVFFMRYRQRP
LHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRPLLLAGVMLVLMGVQMVVAGLIGELLMRIYHEAGGAPQFHAQEYV
PDSRVNMPAARDQKAQAATNNIA

Sequences:

>Translated_343_residues
MNTAPTPAPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFELLAVDDGSRDGSADTLRELAATRPWLRPVFLARNYGQ
SSALQAGFDRVRGRYVVTLDADLQNEPADIPLLLERLENDSSVDMVSGWRKDRQDAELSRKLPSRIANRLISSATGVHLH
DYGCALKAYRRPIIDRIRLYGELHRFIPSLAKEAGARITEVPVRHHARTRGVSKYGIDRTFRVILDLILIVFFMRYRQRP
LHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRPLLLAGVMLVLMGVQMVVAGLIGELLMRIYHEAGGAPQFHAQEYV
PDSRVNMPAARDQKAQAATNNIA
>Mature_343_residues
MNTAPTPAPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFELLAVDDGSRDGSADTLRELAATRPWLRPVFLARNYGQ
SSALQAGFDRVRGRYVVTLDADLQNEPADIPLLLERLENDSSVDMVSGWRKDRQDAELSRKLPSRIANRLISSATGVHLH
DYGCALKAYRRPIIDRIRLYGELHRFIPSLAKEAGARITEVPVRHHARTRGVSKYGIDRTFRVILDLILIVFFMRYRQRP
LHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRPLLLAGVMLVLMGVQMVVAGLIGELLMRIYHEAGGAPQFHAQEYV
PDSRVNMPAARDQKAQAATNNIA

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI4503363, Length=218, Percent_Identity=29.3577981651376, Blast_Score=89, Evalue=4e-18,
Organism=Escherichia coli, GI1788588, Length=324, Percent_Identity=37.962962962963, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1788692, Length=313, Percent_Identity=27.1565495207668, Blast_Score=123, Evalue=2e-29,
Organism=Escherichia coli, GI1787259, Length=103, Percent_Identity=35.9223300970874, Blast_Score=66, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71999402, Length=224, Percent_Identity=29.4642857142857, Blast_Score=84, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325441, Length=113, Percent_Identity=36.283185840708, Blast_Score=72, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24585265, Length=225, Percent_Identity=29.3333333333333, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 38035; Mature: 38035

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTAPTPAPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFELLAVDDGSRDGSADTLR
CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
ELAATRPWLRPVFLARNYGQSSALQAGFDRVRGRYVVTLDADLQNEPADIPLLLERLEND
HHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCC
SSVDMVSGWRKDRQDAELSRKLPSRIANRLISSATGVHLHDYGCALKAYRRPIIDRIRLY
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
GELHRFIPSLAKEAGARITEVPVRHHARTRGVSKYGIDRTFRVILDLILIVFFMRYRQRP
HHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRPLLLAGVMLVLMGVQMVVAGLIGEL
HHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMRIYHEAGGAPQFHAQEYVPDSRVNMPAARDQKAQAATNNIA
HHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MNTAPTPAPDVSIVVPIYNEVENLPDLVERIAQAMSAQPLSFELLAVDDGSRDGSADTLR
CCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCHHHHH
ELAATRPWLRPVFLARNYGQSSALQAGFDRVRGRYVVTLDADLQNEPADIPLLLERLEND
HHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCC
SSVDMVSGWRKDRQDAELSRKLPSRIANRLISSATGVHLHDYGCALKAYRRPIIDRIRLY
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHH
GELHRFIPSLAKEAGARITEVPVRHHARTRGVSKYGIDRTFRVILDLILIVFFMRYRQRP
HHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
LHAFGGLGLWLAAPGVLILAWLLLQKVLGEDIGGRPLLLAGVMLVLMGVQMVVAGLIGEL
HHHHCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LMRIYHEAGGAPQFHAQEYVPDSRVNMPAARDQKAQAATNNIA
HHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA