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The map label for this gene is yurN [H]

Identifier: 222109598

GI number: 222109598

Start: 390338

End: 391234

Strand: Direct

Name: yurN [H]

Synonym: Dtpsy_0378

Alternate gene names: 222109598

Gene position: 390338-391234 (Clockwise)

Preceding gene: 222109597

Following gene: 222109599

Centisome position: 10.28

GC content: 64.99

Gene sequence:

>897_bases
ATGAGTAGTACGACCAAACCCGTGAACCAGAAGGCCTGGTTCCTGGTGCTGCCGGTGATTCTGTGCGTGGCCTTCTCGGC
CATCCTGCCCTTGATGACGGTGGTGAACTACTCGGTGCAGGACATCATCAGCCCCGAGCGCCGCGTGTTCGTGGGCACGG
AATGGTTCGCCGCCGTGCTGCGCGACGAGGAACTGCACGGTGCGCTCGTGCGCCAGCTCACGTTCTCGCTGGCGGTGCTG
CTGGTGGAAATTCCGCTGGGCATCCTGCTGGCGCTCAGCATGCCCGCGCAGGGCTGGAAGTCGTCGGCGGTGCTGGTCAT
CGTGGCGCTGTCGCTCTTGATCCCGTGGAACGTGGTGGGCACCATCTGGCAGATCTTTGGCCGCTCGGACATCGGCCTGC
TGGGCGCGGCGTTCGAGGCCATCGGCTTCGACTACAGCTACACCGGCAACGCCACCCACGCCTGGCTCACCGTGCTGGCC
ATGGACGTGTGGCACTGGACTCCGCTGGTGGCGCTCCTGTGCTTCGCGGGGCTGCGCAGCATTCCCGACGCGTACTACCA
GGCGGCGCGCATCGACGGTGCGAGCAAGTTCGCCGTGTTCCGCTACATCCAACTGCCCAAGATGCGCGGCGTGCTGATGA
TCGCCGTGCTGCTGCGCTTCATGGACAGCTTCATGATCTACACCGAGCCCTTCGTGCTCACCGGCGGCGGGCCGGGCAAC
GCGACCACCTTCCTCAGCCAGTACCTCACGCAAAAGGCCGTGGGCCAGTTCGACCTGGGGCCGGCGGCGGCGTTCTCGCT
GATCTACTTCCTCATCATCCTGCTGCTGTGCTTCATCCTCTACAACTGGATGCAGCGCGTGGGCACCACGCCGAAGGAGG
GTGCCGGCCATGAATGA

Upstream 100 bases:

>100_bases
GGGGACGGTGCCCTTTGCTGCGGAGCGGCCCTTGCTGGGCGCCCCGCCGTCTGCGCCGCACCAGTGGTGCGCGTCGCAGG
CTATCCCTTGGAGCACTGCC

Downstream 100 bases:

>100_bases
GCCCCGCTTCCAGAAACGCACGCTGTTCCTGATTGCCTACCTGGTGTTCGCCGTGCTGCCCATCTACTGGATGGTCAACA
TGAGCTTCAAGACCAACGAG

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MSSTTKPVNQKAWFLVLPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAAVLRDEELHGALVRQLTFSLAVL
LVEIPLGILLALSMPAQGWKSSAVLVIVALSLLIPWNVVGTIWQIFGRSDIGLLGAAFEAIGFDYSYTGNATHAWLTVLA
MDVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTTPKEGAGHE

Sequences:

>Translated_298_residues
MSSTTKPVNQKAWFLVLPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAAVLRDEELHGALVRQLTFSLAVL
LVEIPLGILLALSMPAQGWKSSAVLVIVALSLLIPWNVVGTIWQIFGRSDIGLLGAAFEAIGFDYSYTGNATHAWLTVLA
MDVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTTPKEGAGHE
>Mature_297_residues
SSTTKPVNQKAWFLVLPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAAVLRDEELHGALVRQLTFSLAVLL
VEIPLGILLALSMPAQGWKSSAVLVIVALSLLIPWNVVGTIWQIFGRSDIGLLGAAFEAIGFDYSYTGNATHAWLTVLAM
DVWHWTPLVALLCFAGLRSIPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGNA
TTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTTPKEGAGHE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=23.972602739726, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1790465, Length=264, Percent_Identity=26.1363636363636, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32891; Mature: 32760

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSTTKPVNQKAWFLVLPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAAVL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
RDEELHGALVRQLTFSLAVLLVEIPLGILLALSMPAQGWKSSAVLVIVALSLLIPWNVVG
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TIWQIFGRSDIGLLGAAFEAIGFDYSYTGNATHAWLTVLAMDVWHWTPLVALLCFAGLRS
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
CCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTTPKEGAGHE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SSTTKPVNQKAWFLVLPVILCVAFSAILPLMTVVNYSVQDIISPERRVFVGTEWFAAVL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHH
RDEELHGALVRQLTFSLAVLLVEIPLGILLALSMPAQGWKSSAVLVIVALSLLIPWNVVG
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
TIWQIFGRSDIGLLGAAFEAIGFDYSYTGNATHAWLTVLAMDVWHWTPLVALLCFAGLRS
HHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPDAYYQAARIDGASKFAVFRYIQLPKMRGVLMIAVLLRFMDSFMIYTEPFVLTGGGPGN
CCHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCH
ATTFLSQYLTQKAVGQFDLGPAAAFSLIYFLIILLLCFILYNWMQRVGTTPKEGAGHE
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]