| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is trpD
Identifier: 222109579
GI number: 222109579
Start: 368952
End: 369986
Strand: Direct
Name: trpD
Synonym: Dtpsy_0359
Alternate gene names: 222109579
Gene position: 368952-369986 (Clockwise)
Preceding gene: 222109578
Following gene: 222109580
Centisome position: 9.72
GC content: 67.83
Gene sequence:
>1035_bases ATGACCCCCATCACCCCCCAGGAAGCGCTGCAGCGCACCATCGAGCACCGCGAGATCTTCCACGACGAGATGCTGCACCT CATGCGCATGATCATGAGCGGCGAACTCTCGCCCGTCATGACCGCGGCCATCACCACCGGCCTGCGCGTGAAGAAGGAAA CCATCGGCGAGATCACCGCCGCCGCGCAGGTGATGCGCGAGTTCTCCCACAAGGTGCAGGTGCACGACACCAAGCACCTC GTGGACATCGTGGGCACGGGCGGCGACGGCGCCAACACCTTCAACATCTCCACCTGCGCCACCTTCGTGATCGCCGCCGC GGGCGCCAAGGTCAGCAAGCATGGCGGGCGCAGCGTCAGCAGCAAAAGCGGCAGCGCCGACGCCATGGAGGCGCTGGGCG TGCACATCAACCTGCAGCCTGCGCAGATCGCGCAGTGCATTGGCGACGTGGGCATCGGCTTCATGTTCGCGCCCAACCAC CACCCCGCCATGAAGAACGTGGCGCCGGTGCGCAAGGAGCTGGGCGTGCGGACCATTTTCAACATCCTGGGGCCGCTGAC CAACCCGGCAGGTGCGCCCAACATCCTCATGGGCGTGTTCCACGAAGACCTGGTGGGCATCCAGGTGCGTGCGCTGCAAC GCCTGGGCGCCGAGCACGCGCTGGTGGTCTACGGCCGTGACGGGCTGGACGAAATCAGCCTGGGCGCGGGCACGCTGGTG GGCGAATTGAAAGACGGCGCGGTGCGCGAGTACGAGATCCACCCCGAGGACTTCGGCCTGCGCATGGCAGGCACGCGGGC GCTGCGCGTGGAGAACCCGACCGAATCCAAGGCCATGCTGATGGGCGTGCTGCAGGGCGACGAAGGCCCGGCGCGCGACA TCGTCTGCCTGAATGCCGGTGCCGCCTTGTATGCTGCCAACGTGGCCGACTCGCTGGAAGACGGCCTGCGCCGCGCCCAG CAGGCCCTGGCCAGCGGCGCGGCCCTGGCCAAGCTGCAGCAGCTGGTCGCCTACACCCAGAAGCTCGCGGCCTGA
Upstream 100 bases:
>100_bases TAAGAGCTGCCAGCGCTTGCCTATAAACGATTTCAGTGTGAAAAATGCTTGAAATGCATATACAGCAAGCGCACGCAGCT ATCAAAATAGAGGTACTTCC
Downstream 100 bases:
>100_bases GCGCACGGCGATGAGCTTGCTGGACGCTCCCATCTGGAACGACCCCGCGACGTGGATCGTGCTGGGCGTGTCGCTGCTGT TCATCGTCGTGGGCATCGTG
Product: anthranilate phosphoribosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 344; Mature: 343
Protein sequence:
>344_residues MTPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHL VDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNH HPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLV GELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQ QALASGAALAKLQQLVAYTQKLAA
Sequences:
>Translated_344_residues MTPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHL VDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNH HPAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLV GELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQ QALASGAALAKLQQLVAYTQKLAA >Mature_343_residues TPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITAAAQVMREFSHKVQVHDTKHLV DIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVSSKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHH PAMKNVAPVRKELGVRTIFNILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLVG ELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAGAALYAANVADSLEDGLRRAQQ ALASGAALAKLQQLVAYTQKLAA
Specific function: Tryptophan biosynthesis; first step. Tryptophan biosynthesis; second step. [C]
COG id: COG0547
COG function: function code E; Anthranilate phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate phosphoribosyltransferase family
Homologues:
Organism=Escherichia coli, GI1787517, Length=282, Percent_Identity=40.0709219858156, Blast_Score=188, Evalue=4e-49, Organism=Saccharomyces cerevisiae, GI6320561, Length=326, Percent_Identity=31.2883435582822, Blast_Score=137, Evalue=3e-33,
Paralogues:
None
Copy number: 945 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 900 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): TRPD_ACIET (B9MBS3)
Other databases:
- EMBL: CP001392 - RefSeq: YP_002551843.1 - ProteinModelPortal: B9MBS3 - SMR: B9MBS3 - GeneID: 7385367 - GenomeReviews: CP001392_GR - KEGG: dia:Dtpsy_0359 - ProtClustDB: PRK00188 - HAMAP: MF_00211 - InterPro: IPR005940 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 - Gene3D: G3DSA:1.20.970.10 - Gene3D: G3DSA:3.40.1030.10 - TIGRFAMs: TIGR01245
Pfam domain/function: PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3; SSF47648 Glyco_trans_3; SSF52418 Glyco_trans_3
EC number: =2.4.2.18
Molecular weight: Translated: 36474; Mature: 36342
Theoretical pI: Translated: 6.71; Mature: 6.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH AAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVS HHHHHHHHHHCEEECCHHEEEEEEECCCCCCCEEEHHHHHHHHHHHCCCHHHHCCCCCCC SKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIF CCCCCHHHHHHHCCEEECCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHH NILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCHHH GELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAG HHCCCCCEEEEEECCCCCCEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECC AALYAANVADSLEDGLRRAQQALASGAALAKLQQLVAYTQKLAA CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPITPQEALQRTIEHREIFHDEMLHLMRMIMSGELSPVMTAAITTGLRVKKETIGEITA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHH AAQVMREFSHKVQVHDTKHLVDIVGTGGDGANTFNISTCATFVIAAAGAKVSKHGGRSVS HHHHHHHHHHCEEECCHHEEEEEEECCCCCCCEEEHHHHHHHHHHHCCCHHHHCCCCCCC SKSGSADAMEALGVHINLQPAQIAQCIGDVGIGFMFAPNHHPAMKNVAPVRKELGVRTIF CCCCCHHHHHHHCCEEECCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHHHHHH NILGPLTNPAGAPNILMGVFHEDLVGIQVRALQRLGAEHALVVYGRDGLDEISLGAGTLV HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHCCCCHHH GELKDGAVREYEIHPEDFGLRMAGTRALRVENPTESKAMLMGVLQGDEGPARDIVCLNAG HHCCCCCEEEEEECCCCCCEEEECCEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEEECC AALYAANVADSLEDGLRRAQQALASGAALAKLQQLVAYTQKLAA CHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA