| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is yheT [H]
Identifier: 222109533
GI number: 222109533
Start: 322522
End: 323526
Strand: Direct
Name: yheT [H]
Synonym: Dtpsy_0313
Alternate gene names: 222109533
Gene position: 322522-323526 (Clockwise)
Preceding gene: 222109532
Following gene: 222109534
Centisome position: 8.5
GC content: 74.13
Gene sequence:
>1005_bases ATGAAATATGAAGCGCCTTGGTGGCTGCCCGGCGGCCATGCACAGACCATCTGGCCCGCGCTGTGGGCGCGGCGCACGCT GGGGCCGCCGCCGGCCTATGTGCGCGAGCGCTGGCTGGCGCCCGACGGCGACTTCGTGGACGTGGACTTCCTGCGGCCGT GTGCCGCGGCGGGCGCGGCCCCCGCGCCGCTGCTGGTGCTGTTCCATGGACTGGAAGGCTCGTCGCGCAGCCACTATGCG CAGGCCTTCGCCGGCGTGGCCCGCGAGCGCGGCTGGGGTTTTGCCGTGCCGCATTTTCGCGGCTGCAGCGGCGAGATCAA CCGCGCGCCGCGCGCCTACCATTCGGGCGACCATGAAGAGATCGACTGGATCCTCCGGCGCCTGGCCGGGTTGCAGCGGA CCGGCGGTGGGGCGCGGGCGCCGCTGCTGGCCGTGGGGGTGTCGCTGGGCGGCAATGCGCTGATGCGCTGGGCCGGCGAG CAGGGCGGCAGCGCGCTCGCCAGCGCGGACGCCATCGCCAGCGTGTGCGCTCCGCTGGACCTGGCGGCCGGCGGCCACGC CATCGGGCGGGGCTTCAACCGGCAGGTGTACACGCGCATGTTCCTGCGCACCATGGTGCCCAAGGCGCTGGCCAAGCTGG CGCAGTACCCCGGCCTGTTCGACCGCGCGGCCCTGCTGGCCGCGCGCGATCTGCACGCTTTTGACGACATCTTCACCGCG CCGCTGCACGGCTTTCGCGATGCGGACGACTACTGGCGCCGCGCGTCGGCCAAGCCGCTGCTGCCTGCGGTGCGCGTGCC GGCGCTGCTGGTCAATGCGCGCAACGATCCCTTCGTGCCCGGCGCCAGCCTGCCGCGCGACGGTGAGGTGGCGCCCGTGG TCACGCTCTGGCAGCCGGCGCATGGCGGCCACGTCGGCTTTGCGCAGGGCGGCTGGCCCGGCCATGTGCGCGCCCTGCCC GAAGCCGTGGCTGCCTGGCTGGCCGACCACGCGGCGCTGGGGTGA
Upstream 100 bases:
>100_bases TGCGCCCGCCGGGCACCTGCTGCATTGATGCCAAGCCTTTGATGGGCTGGTTTATGGGTCAAATGGGCCTCTAGCACAAT ACCAGCAAGCGCTGCCAGCT
Downstream 100 bases:
>100_bases ATACCTGCGGGGGCGCGGACGAGGGCGCACAATCGCTGTCATGGATGACATCGTCAAGCAGGCCATCGCCAAATGGCCCA ACGTGCCGGCCTGCTACGGC
Product: alpha/beta hydrolase fold protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MKYEAPWWLPGGHAQTIWPALWARRTLGPPPAYVRERWLAPDGDFVDVDFLRPCAAAGAAPAPLLVLFHGLEGSSRSHYA QAFAGVARERGWGFAVPHFRGCSGEINRAPRAYHSGDHEEIDWILRRLAGLQRTGGGARAPLLAVGVSLGGNALMRWAGE QGGSALASADAIASVCAPLDLAAGGHAIGRGFNRQVYTRMFLRTMVPKALAKLAQYPGLFDRAALLAARDLHAFDDIFTA PLHGFRDADDYWRRASAKPLLPAVRVPALLVNARNDPFVPGASLPRDGEVAPVVTLWQPAHGGHVGFAQGGWPGHVRALP EAVAAWLADHAALG
Sequences:
>Translated_334_residues MKYEAPWWLPGGHAQTIWPALWARRTLGPPPAYVRERWLAPDGDFVDVDFLRPCAAAGAAPAPLLVLFHGLEGSSRSHYA QAFAGVARERGWGFAVPHFRGCSGEINRAPRAYHSGDHEEIDWILRRLAGLQRTGGGARAPLLAVGVSLGGNALMRWAGE QGGSALASADAIASVCAPLDLAAGGHAIGRGFNRQVYTRMFLRTMVPKALAKLAQYPGLFDRAALLAARDLHAFDDIFTA PLHGFRDADDYWRRASAKPLLPAVRVPALLVNARNDPFVPGASLPRDGEVAPVVTLWQPAHGGHVGFAQGGWPGHVRALP EAVAAWLADHAALG >Mature_334_residues MKYEAPWWLPGGHAQTIWPALWARRTLGPPPAYVRERWLAPDGDFVDVDFLRPCAAAGAAPAPLLVLFHGLEGSSRSHYA QAFAGVARERGWGFAVPHFRGCSGEINRAPRAYHSGDHEEIDWILRRLAGLQRTGGGARAPLLAVGVSLGGNALMRWAGE QGGSALASADAIASVCAPLDLAAGGHAIGRGFNRQVYTRMFLRTMVPKALAKLAQYPGLFDRAALLAARDLHAFDDIFTA PLHGFRDADDYWRRASAKPLLPAVRVPALLVNARNDPFVPGASLPRDGEVAPVVTLWQPAHGGHVGFAQGGWPGHVRALP EAVAAWLADHAALG
Specific function: Unknown
COG id: COG0429
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. AB hydrolase 4 family [H]
Homologues:
Organism=Homo sapiens, GI23397663, Length=316, Percent_Identity=26.8987341772152, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI194578891, Length=317, Percent_Identity=27.7602523659306, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI1789752, Length=320, Percent_Identity=40.625, Blast_Score=201, Evalue=4e-53, Organism=Caenorhabditis elegans, GI17566110, Length=338, Percent_Identity=25.1479289940828, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71985405, Length=329, Percent_Identity=24.0121580547112, Blast_Score=102, Evalue=3e-22, Organism=Saccharomyces cerevisiae, GI6323866, Length=257, Percent_Identity=28.4046692607004, Blast_Score=99, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6319655, Length=275, Percent_Identity=28, Blast_Score=80, Evalue=4e-16, Organism=Drosophila melanogaster, GI281398151, Length=323, Percent_Identity=26.0061919504644, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24652003, Length=323, Percent_Identity=26.0061919504644, Blast_Score=107, Evalue=1e-23, Organism=Drosophila melanogaster, GI24581365, Length=324, Percent_Identity=22.8395061728395, Blast_Score=82, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012020 - InterPro: IPR000073 - InterPro: IPR000952 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: NA
Molecular weight: Translated: 35741; Mature: 35741
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYEAPWWLPGGHAQTIWPALWARRTLGPPPAYVRERWLAPDGDFVDVDFLRPCAAAGAA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHCCCC PAPLLVLFHGLEGSSRSHYAQAFAGVARERGWGFAVPHFRGCSGEINRAPRAYHSGDHEE CCCEEHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHH IDWILRRLAGLQRTGGGARAPLLAVGVSLGGNALMRWAGEQGGSALASADAIASVCAPLD HHHHHHHHHHHHCCCCCCCCCHHHEEHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LAAGGHAIGRGFNRQVYTRMFLRTMVPKALAKLAQYPGLFDRAALLAARDLHAFDDIFTA HCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PLHGFRDADDYWRRASAKPLLPAVRVPALLVNARNDPFVPGASLPRDGEVAPVVTLWQPA HHCCCCCHHHHHHHCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCC HGGHVGFAQGGWPGHVRALPEAVAAWLADHAALG CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKYEAPWWLPGGHAQTIWPALWARRTLGPPPAYVRERWLAPDGDFVDVDFLRPCAAAGAA CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCEEEHHHHHHHHHCCCC PAPLLVLFHGLEGSSRSHYAQAFAGVARERGWGFAVPHFRGCSGEINRAPRAYHSGDHEE CCCEEHEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCCHHH IDWILRRLAGLQRTGGGARAPLLAVGVSLGGNALMRWAGEQGGSALASADAIASVCAPLD HHHHHHHHHHHHCCCCCCCCCHHHEEHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH LAAGGHAIGRGFNRQVYTRMFLRTMVPKALAKLAQYPGLFDRAALLAARDLHAFDDIFTA HCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH PLHGFRDADDYWRRASAKPLLPAVRVPALLVNARNDPFVPGASLPRDGEVAPVVTLWQPA HHCCCCCHHHHHHHCCCCCCCHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEEEEECCC HGGHVGFAQGGWPGHVRALPEAVAAWLADHAALG CCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]