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The map label for this gene is atpH

Identifier: 222109520

GI number: 222109520

Start: 308129

End: 308671

Strand: Direct

Name: atpH

Synonym: Dtpsy_0300

Alternate gene names: 222109520

Gene position: 308129-308671 (Clockwise)

Preceding gene: 222109519

Following gene: 222109521

Centisome position: 8.12

GC content: 64.46

Gene sequence:

>543_bases
ATGGCTGAACTCGCCACCATTGCCCGCCCTTACGCCGAGGCGCTGTACAAGGCCTGCACCGACCAAGCGGGTGTGGACCT
GAATGGCGCCACAGCCTGGGTGGACGAGCTGGCGGCGATTGCCGCCAATCCCCAATTGCGCCAACTGGCGGACAACCCCA
AGGTGACGGGCGAGCAGGTGTTCGACGTCATCGTGGGCGTGGCCCGCTCGGCGTTGCCTGACCTGGCCAAGAACTTCCTG
CGTACCGTGATCGACAACGGGCGCGTGCAGGCGCTGCCTGAAATCGCGGCCCAGTTCCGTACGCTGGTCAATCGCAGCCA
CGGCACTTCGGATGCCGTGGTGTACAGCGCCTTCCCGCTGGATGCGGGCGCTCTGACCGATGTGGGTGCCACGCTTGAAA
AGCGCTTCGGTCGCAAGCTCAATCTCTCCGTGCAGTTGGATGAGACCCTGATCGGCGGCGTGCGCGTGGTGGTGGGCGAC
GAGGTGCTCGACACTTCCGTCAAAGCCCGTCTGGAACAAATGAAAGCTGCCCTCACCGCCTGA

Upstream 100 bases:

>100_bases
CCGTCAAGGGGGCTGAGCAGATTCTCCGCAAGGAAGTCAATGCCGGCGTTCATGCCGATCTGCTGAACCGTCTGAAGACC
GAGCTGTAAGGGAGCATTCA

Downstream 100 bases:

>100_bases
TGGGCATGAGGTCTCGGCTATACCCCAAGAAAGAAGGAAAGAGTCATGCAACTCAATCCCGCAGAAATTTCTGAACTGAT
CAAGAGCCGCATCGAAGGTC

Product: f0f1 ATP synthase subunit delta

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 180; Mature: 179

Protein sequence:

>180_residues
MAELATIARPYAEALYKACTDQAGVDLNGATAWVDELAAIAANPQLRQLADNPKVTGEQVFDVIVGVARSALPDLAKNFL
RTVIDNGRVQALPEIAAQFRTLVNRSHGTSDAVVYSAFPLDAGALTDVGATLEKRFGRKLNLSVQLDETLIGGVRVVVGD
EVLDTSVKARLEQMKAALTA

Sequences:

>Translated_180_residues
MAELATIARPYAEALYKACTDQAGVDLNGATAWVDELAAIAANPQLRQLADNPKVTGEQVFDVIVGVARSALPDLAKNFL
RTVIDNGRVQALPEIAAQFRTLVNRSHGTSDAVVYSAFPLDAGALTDVGATLEKRFGRKLNLSVQLDETLIGGVRVVVGD
EVLDTSVKARLEQMKAALTA
>Mature_179_residues
AELATIARPYAEALYKACTDQAGVDLNGATAWVDELAAIAANPQLRQLADNPKVTGEQVFDVIVGVARSALPDLAKNFLR
TVIDNGRVQALPEIAAQFRTLVNRSHGTSDAVVYSAFPLDAGALTDVGATLEKRFGRKLNLSVQLDETLIGGVRVVVGDE
VLDTSVKARLEQMKAALTA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Escherichia coli, GI1790173, Length=176, Percent_Identity=32.3863636363636, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_ACIET (B9MBA0)

Other databases:

- EMBL:   CP001392
- RefSeq:   YP_002551784.1
- ProteinModelPortal:   B9MBA0
- SMR:   B9MBA0
- GeneID:   7383884
- GenomeReviews:   CP001392_GR
- KEGG:   dia:Dtpsy_0300
- ProtClustDB:   PRK05758
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19132; Mature: 19001

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAELATIARPYAEALYKACTDQAGVDLNGATAWVDELAAIAANPQLRQLADNPKVTGEQV
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH
FDVIVGVARSALPDLAKNFLRTVIDNGRVQALPEIAAQFRTLVNRSHGTSDAVVYSAFPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
DAGALTDVGATLEKRFGRKLNLSVQLDETLIGGVRVVVGDEVLDTSVKARLEQMKAALTA
CCCHHHHHHHHHHHHCCCEECEEEEECCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AELATIARPYAEALYKACTDQAGVDLNGATAWVDELAAIAANPQLRQLADNPKVTGEQV
CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHH
FDVIVGVARSALPDLAKNFLRTVIDNGRVQALPEIAAQFRTLVNRSHGTSDAVVYSAFPL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
DAGALTDVGATLEKRFGRKLNLSVQLDETLIGGVRVVVGDEVLDTSVKARLEQMKAALTA
CCCHHHHHHHHHHHHCCCEECEEEEECCHHHCCEEEEECCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA