Definition Acidovorax ebreus TPSY chromosome, complete genome.
Accession NC_011992
Length 3,796,573

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The map label for this gene is bugT [H]

Identifier: 222109338

GI number: 222109338

Start: 131870

End: 132865

Strand: Direct

Name: bugT [H]

Synonym: Dtpsy_0116

Alternate gene names: 222109338

Gene position: 131870-132865 (Clockwise)

Preceding gene: 222109337

Following gene: 222109339

Centisome position: 3.47

GC content: 69.68

Gene sequence:

>996_bases
ATGTCACTGCCTCGTCCCTCGCGGCTGCGCCGCGCCTTGCTCGCCAGCATGGCCCTGACCGCCAGCGCCCTGCTGGCGCC
CGTTGCCTACGCCGCGGACGCCTGGCCCGCCAAGCCGATCCAGCTCGTGATTCCCTACCCGCCTGGTGGCAGCGCCGACC
TGCTGGGGCGCCCCTTGGCGATGCAGTTGCAGCAGCAGCTGGGCCAGCCCGTGGTGCTGGAGTACAAACCCGGGGCGGGC
GGCACGCTGGCCTCGCAGTATGTGGCGCGGGCCAAGCCCGATGGCTACACCGTGTTCATGGTGCTGGCCGCGCATGCCAT
CAACGACAGCCTCTACCCCAAGCTGCCCTACGACACGCGCAAGGACTTCGCCCCCGTGTCGCTGGTGGCCAACCTGCCCA
TGGTGGTGGCGGCCAGCGGCAAGCTGCCTGCAAAAAACATCCATGAACTGATCCAGGCCGCCAAGGCGGCGCCGGGCAAG
CTCACCTTTGGCTCGGCCGGCAACGGCAACACCGGGCACCTCGCGGCGGAATACTTCAGCAGCATTGCCGGGGTCAAGAT
GACGCACGTGCCCTACAAAGGCAGCGCCGGCGTGGTCAATGCCATGCTGGCGGGTGACATCGACCTCACGTTCGACAGCA
TCTCCACCTCCATGCCGCACATCCGCGGCGGGCGCATGCATGCGCTGGCCGTCACCAGCCCGCAGCGCTCGGCCCTGGCG
CCCGAGGTGCCGACGGTGCAGGAGCAGGGCATGGCCGGCTTTGACGTGACCGGCTGGTATGCGCTGATCGCGCCAGCCGG
CACGCCACCCGAGATTACCCAGCGCCTGAGCCGCGAGATCGCCGCCGCGCTGCGCCAGCCCCAGCTGCAATCCCAACTGG
CCGCCGGCGGCTACGAGCCCGTGGGCTCCACCCCCGAGGCGCTGCAGGCGCACATCGAGCGCGAGATCACGCGCTGGGCC
GCCGTGGTCAAGTCCACGGGGGCAAGAGTGGATTGA

Upstream 100 bases:

>100_bases
CAGCGAGATCGGCAAGGTGCTCAAGCGCACGCTGCGCGAGCAGTACCTGCAAGCGGCGCCCATCGCCGGCTGACTTTCCT
CTCACCACCCGGAGACTGCC

Downstream 100 bases:

>100_bases
CACCCCCTGAGCCGCTGCGCCGCTTCCCCCCTCGCGGCTGCGCCGGGCAGGACGCAGCCAGCGCGGCGGCGCGGCCGGCA
TAGGCCGGCATAGGCCCTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSLPRPSRLRRALLASMALTASALLAPVAYAADAWPAKPIQLVIPYPPGGSADLLGRPLAMQLQQQLGQPVVLEYKPGAG
GTLASQYVARAKPDGYTVFMVLAAHAINDSLYPKLPYDTRKDFAPVSLVANLPMVVAASGKLPAKNIHELIQAAKAAPGK
LTFGSAGNGNTGHLAAEYFSSIAGVKMTHVPYKGSAGVVNAMLAGDIDLTFDSISTSMPHIRGGRMHALAVTSPQRSALA
PEVPTVQEQGMAGFDVTGWYALIAPAGTPPEITQRLSREIAAALRQPQLQSQLAAGGYEPVGSTPEALQAHIEREITRWA
AVVKSTGARVD

Sequences:

>Translated_331_residues
MSLPRPSRLRRALLASMALTASALLAPVAYAADAWPAKPIQLVIPYPPGGSADLLGRPLAMQLQQQLGQPVVLEYKPGAG
GTLASQYVARAKPDGYTVFMVLAAHAINDSLYPKLPYDTRKDFAPVSLVANLPMVVAASGKLPAKNIHELIQAAKAAPGK
LTFGSAGNGNTGHLAAEYFSSIAGVKMTHVPYKGSAGVVNAMLAGDIDLTFDSISTSMPHIRGGRMHALAVTSPQRSALA
PEVPTVQEQGMAGFDVTGWYALIAPAGTPPEITQRLSREIAAALRQPQLQSQLAAGGYEPVGSTPEALQAHIEREITRWA
AVVKSTGARVD
>Mature_330_residues
SLPRPSRLRRALLASMALTASALLAPVAYAADAWPAKPIQLVIPYPPGGSADLLGRPLAMQLQQQLGQPVVLEYKPGAGG
TLASQYVARAKPDGYTVFMVLAAHAINDSLYPKLPYDTRKDFAPVSLVANLPMVVAASGKLPAKNIHELIQAAKAAPGKL
TFGSAGNGNTGHLAAEYFSSIAGVKMTHVPYKGSAGVVNAMLAGDIDLTFDSISTSMPHIRGGRMHALAVTSPQRSALAP
EVPTVQEQGMAGFDVTGWYALIAPAGTPPEITQRLSREIAAALRQPQLQSQLAAGGYEPVGSTPEALQAHIEREITRWAA
VVKSTGARVD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34711; Mature: 34580

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: PS00435 PEROXIDASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPRPSRLRRALLASMALTASALLAPVAYAADAWPAKPIQLVIPYPPGGSADLLGRPLA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCHHH
MQLQQQLGQPVVLEYKPGAGGTLASQYVARAKPDGYTVFMVLAAHAINDSLYPKLPYDTR
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCCC
KDFAPVSLVANLPMVVAASGKLPAKNIHELIQAAKAAPGKLTFGSAGNGNTGHLAAEYFS
CCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHH
SIAGVKMTHVPYKGSAGVVNAMLAGDIDLTFDSISTSMPHIRGGRMHALAVTSPQRSALA
HHCCCEEEECCCCCCCCHHHHHHHCCCEEEHHHHHCCCCCCCCCCEEEEEECCCCHHCCC
PEVPTVQEQGMAGFDVTGWYALIAPAGTPPEITQRLSREIAAALRQPQLQSQLAAGGYEP
CCCCCHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
VGSTPEALQAHIEREITRWAAVVKSTGARVD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SLPRPSRLRRALLASMALTASALLAPVAYAADAWPAKPIQLVIPYPPGGSADLLGRPLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHCCHHH
MQLQQQLGQPVVLEYKPGAGGTLASQYVARAKPDGYTVFMVLAAHAINDSLYPKLPYDTR
HHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCCC
KDFAPVSLVANLPMVVAASGKLPAKNIHELIQAAKAAPGKLTFGSAGNGNTGHLAAEYFS
CCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHH
SIAGVKMTHVPYKGSAGVVNAMLAGDIDLTFDSISTSMPHIRGGRMHALAVTSPQRSALA
HHCCCEEEECCCCCCCCHHHHHHHCCCEEEHHHHHCCCCCCCCCCEEEEEECCCCHHCCC
PEVPTVQEQGMAGFDVTGWYALIAPAGTPPEITQRLSREIAAALRQPQLQSQLAAGGYEP
CCCCCHHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
VGSTPEALQAHIEREITRWAAVVKSTGARVD
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111902; 12910271; 2873570 [H]