| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
Click here to switch to the map view.
The map label for this gene is 222109319
Identifier: 222109319
GI number: 222109319
Start: 103582
End: 104022
Strand: Direct
Name: 222109319
Synonym: Dtpsy_0096
Alternate gene names: NA
Gene position: 103582-104022 (Clockwise)
Preceding gene: 222109315
Following gene: 222109326
Centisome position: 2.73
GC content: 65.53
Gene sequence:
>441_bases ATGACGAAGTTTGTACACATCGATGTTCCTGTCCAGCACCACGGCATTGCACGCATTGAAGAGGCCGCAAGCCATCTGAA GCAAACCGTTGCCCGCTTTGACGGCACCCGCGGCGCAACGTCGCTGCTGCTGGCGGCGCTGGTCGCCGCGCTGCTTGTCG TGGCCAACCAGGTCATGGACACCTGGAACGATGGCCACATGCTGGCCGGCTGGATGGTGATGTGGGTGATCGCTTTCGCG GGAATGGCGTTGCTGGCGGCACCTGCGCGCAGCGCGGTGCTAGGCCTGCGTGCCGCTGCCAAGGCTTGGTCGGATGCGCA CCGGCGTGCGGCAGAGGACGAGCGCACCTGGAATGCTGCACTGCGCGACGCCCGCATCATGGCCGACCTGAGCCGTGCGA TGAACGGGATCGCGGTGGACGACCTGCGCCGTTACCGCTGA
Upstream 100 bases:
>100_bases TATGGGTGATTCAACATATAAATTAGACACAAACCAGGGTAAACCCTAGTATTGCTGCAACGCCCGGCAATTTCGCCAAC AGTGGCGTACGAGTCGCATC
Downstream 100 bases:
>100_bases ACGGCCGCCCGGCGACACCGCGCCAACCGACAACAGGGCACCTTCGGGTGCCCTTTTTGCTATGTGCGCGGCAGCTTCCT ATGGGGCGCATTCATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MTKFVHIDVPVQHHGIARIEEAASHLKQTVARFDGTRGATSLLLAALVAALLVVANQVMDTWNDGHMLAGWMVMWVIAFA GMALLAAPARSAVLGLRAAAKAWSDAHRRAAEDERTWNAALRDARIMADLSRAMNGIAVDDLRRYR
Sequences:
>Translated_146_residues MTKFVHIDVPVQHHGIARIEEAASHLKQTVARFDGTRGATSLLLAALVAALLVVANQVMDTWNDGHMLAGWMVMWVIAFA GMALLAAPARSAVLGLRAAAKAWSDAHRRAAEDERTWNAALRDARIMADLSRAMNGIAVDDLRRYR >Mature_145_residues TKFVHIDVPVQHHGIARIEEAASHLKQTVARFDGTRGATSLLLAALVAALLVVANQVMDTWNDGHMLAGWMVMWVIAFAG MALLAAPARSAVLGLRAAAKAWSDAHRRAAEDERTWNAALRDARIMADLSRAMNGIAVDDLRRYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15968; Mature: 15837
Theoretical pI: Translated: 10.57; Mature: 10.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKFVHIDVPVQHHGIARIEEAASHLKQTVARFDGTRGATSLLLAALVAALLVVANQVMD CCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH TWNDGHMLAGWMVMWVIAFAGMALLAAPARSAVLGLRAAAKAWSDAHRRAAEDERTWNAA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRDARIMADLSRAMNGIAVDDLRRYR HHHHHHHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure TKFVHIDVPVQHHGIARIEEAASHLKQTVARFDGTRGATSLLLAALVAALLVVANQVMD CCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH TWNDGHMLAGWMVMWVIAFAGMALLAAPARSAVLGLRAAAKAWSDAHRRAAEDERTWNAA HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRDARIMADLSRAMNGIAVDDLRRYR HHHHHHHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA