| Definition | Acidovorax ebreus TPSY chromosome, complete genome. |
|---|---|
| Accession | NC_011992 |
| Length | 3,796,573 |
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The map label for this gene is ywrD [H]
Identifier: 222109236
GI number: 222109236
Start: 8991
End: 10586
Strand: Direct
Name: ywrD [H]
Synonym: Dtpsy_0011
Alternate gene names: 222109236
Gene position: 8991-10586 (Clockwise)
Preceding gene: 222109235
Following gene: 222109237
Centisome position: 0.24
GC content: 74.19
Gene sequence:
>1596_bases ATGACTTGGCAACTCCCCTACCCCTCCGGCCGCCAGCCCGTGCTGGCGCGCAACGTGGTCTCCACCTCCCAGCCGCTGGC CGCGCAGGCCGGCGCGGCGGCGTTTGCGCGCGGCGGCAATGCGATCGACGCGGCCCTGGCCGCGGCCATCACGCTCACGG TGGTGGAGCCGGTGATGAACGGGATTGGCGGCGACGCCTTCGCGCTGGTGTGGGACGGCGCCGCGCTGCACGGCCTGAAC GCCTCGGGCCGCGCGCCGCGCGCCTGGTCGGCCGAGCGCTTTGCCCACTTGCCGCAAATGCCGCGCATCGGCTGGGACAC GGTGACCACGCCCGGCGGCGTGGCGGGCTGGGTGGCGCTGTCCGAGCGCTTTGGCGCCCTGCCCTTCGAAGACCTGTTCG CCGACGCCATCCGCCACGCGCGCGACGGCTTTCCCGTCAGCCCGGTGATCGCGCGCCAGTGGGCGCAGGCGGCCATCGAC CTCAAGGGCCAGCCGGGCTTCGAGGCCTTCACGCCCGGCGGGCGCGCGCCGCAGGCGGGCGAGATCTGGCGCTTTGCCGA CCAGGCGGACACGCTGGCGGACATCGCCCGCACGCGCGGCGCGTCGTTCTACCGCGGCCGGCTGGCGCAGGCCATGGCCG ACTACGCGCGCCAGCACGGCGCAGGCCTGGCGCTGGAGGACCTGGCCGCGCACGCCGTGGAATGGGTGCAGTCCATCAGC GTGCCCTTTGGCGACCGCACGGTGCATGAGATCCCGCCCAACGGCCAGGGCATCGCCGCGCTGATGGCGCTGGGCCTGCT GGAACATCTGCCCTACCGCAGCACCGCAGCGGGCTCGGCCGCGCGCATGCACCTGGAGATCGAGGCCATGCGCGTGGCCT TTGCCGACCTGTACGCCCACGTGGCCGACCCGGACCACATGCGCCTCACCTCCGCGCAGCTGCTGGACCCGGCCTACCTG CGCCAGCGCGCCGCGCTCATCGACCCGCAGCGCGCCGGCCAGTACCCCGCCGGCCAGCCCGGCAGCGGCGGCACGGTGTA TCTGTGCACGGCCGACAGCGAGGGGCGCATGGTGTCGTTCATCCAGTCCAACTTCAAGGGCTTCGGCTCGGGCGTGGTGG TGCCGGGCACGGGCATCGCGCTGCACAACCGCGGCATGGGCTTCGTCACCACGCCGGGCCACCCCAACCAGGTGGCGGGC GGCAAGCGGCCCATGCACAGCATCATTCCCGCCTTCGTCACGCGCGGCGGCCAGCCCCACATGGCCTTTGGCGTGATGGG CGGCAACATGCAGGCCCAGGGCCATGTGCAGATGGTGCTGCGCGAGGCCGTGGAGGGCCTGAACCCCCAGGCCTGCTCCG ACGCGCCGCGCTGGCGCATCAACGACGCGGGCGCGCTGACGCTGGAGCACACCGTGCCCGCCGCCGTGGTCGAGGGCCTG CGCGCGCTGGGGCACGACCCGCAGGTGGCCGCGCCCGGCAGCCTGGAATTCGGCAGCGCACAGATCATCCGCCGGCTGGA GGCCACGCCCGGCACCGGCTTCGCCTACGCCGCGGGCTCCGACCACCGGCGCGACGGCCAGGCCGTCGGCTGCTGA
Upstream 100 bases:
>100_bases TTCGATGCGATCCGCATGGTGCGTAACTCCACGCAGTAGGGCGGCGCCTTCACGGCGGCACAATCGACCCGGCATTCCTT CCCCTTCCAGATCGGCTTCC
Downstream 100 bases:
>100_bases TTCTTATCCCTAGGCATTCAAACCAAAACCGCCTCTAGCGCTTGTCCATCAAGCGCTAGCAGCTATCAAAACAAGAGTAA AGAACGCTGCACCGTCACCT
Product: gamma-glutamyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 531; Mature: 530
Protein sequence:
>531_residues MTWQLPYPSGRQPVLARNVVSTSQPLAAQAGAAAFARGGNAIDAALAAAITLTVVEPVMNGIGGDAFALVWDGAALHGLN ASGRAPRAWSAERFAHLPQMPRIGWDTVTTPGGVAGWVALSERFGALPFEDLFADAIRHARDGFPVSPVIARQWAQAAID LKGQPGFEAFTPGGRAPQAGEIWRFADQADTLADIARTRGASFYRGRLAQAMADYARQHGAGLALEDLAAHAVEWVQSIS VPFGDRTVHEIPPNGQGIAALMALGLLEHLPYRSTAAGSAARMHLEIEAMRVAFADLYAHVADPDHMRLTSAQLLDPAYL RQRAALIDPQRAGQYPAGQPGSGGTVYLCTADSEGRMVSFIQSNFKGFGSGVVVPGTGIALHNRGMGFVTTPGHPNQVAG GKRPMHSIIPAFVTRGGQPHMAFGVMGGNMQAQGHVQMVLREAVEGLNPQACSDAPRWRINDAGALTLEHTVPAAVVEGL RALGHDPQVAAPGSLEFGSAQIIRRLEATPGTGFAYAAGSDHRRDGQAVGC
Sequences:
>Translated_531_residues MTWQLPYPSGRQPVLARNVVSTSQPLAAQAGAAAFARGGNAIDAALAAAITLTVVEPVMNGIGGDAFALVWDGAALHGLN ASGRAPRAWSAERFAHLPQMPRIGWDTVTTPGGVAGWVALSERFGALPFEDLFADAIRHARDGFPVSPVIARQWAQAAID LKGQPGFEAFTPGGRAPQAGEIWRFADQADTLADIARTRGASFYRGRLAQAMADYARQHGAGLALEDLAAHAVEWVQSIS VPFGDRTVHEIPPNGQGIAALMALGLLEHLPYRSTAAGSAARMHLEIEAMRVAFADLYAHVADPDHMRLTSAQLLDPAYL RQRAALIDPQRAGQYPAGQPGSGGTVYLCTADSEGRMVSFIQSNFKGFGSGVVVPGTGIALHNRGMGFVTTPGHPNQVAG GKRPMHSIIPAFVTRGGQPHMAFGVMGGNMQAQGHVQMVLREAVEGLNPQACSDAPRWRINDAGALTLEHTVPAAVVEGL RALGHDPQVAAPGSLEFGSAQIIRRLEATPGTGFAYAAGSDHRRDGQAVGC >Mature_530_residues TWQLPYPSGRQPVLARNVVSTSQPLAAQAGAAAFARGGNAIDAALAAAITLTVVEPVMNGIGGDAFALVWDGAALHGLNA SGRAPRAWSAERFAHLPQMPRIGWDTVTTPGGVAGWVALSERFGALPFEDLFADAIRHARDGFPVSPVIARQWAQAAIDL KGQPGFEAFTPGGRAPQAGEIWRFADQADTLADIARTRGASFYRGRLAQAMADYARQHGAGLALEDLAAHAVEWVQSISV PFGDRTVHEIPPNGQGIAALMALGLLEHLPYRSTAAGSAARMHLEIEAMRVAFADLYAHVADPDHMRLTSAQLLDPAYLR QRAALIDPQRAGQYPAGQPGSGGTVYLCTADSEGRMVSFIQSNFKGFGSGVVVPGTGIALHNRGMGFVTTPGHPNQVAGG KRPMHSIIPAFVTRGGQPHMAFGVMGGNMQAQGHVQMVLREAVEGLNPQACSDAPRWRINDAGALTLEHTVPAAVVEGLR ALGHDPQVAAPGSLEFGSAQIIRRLEATPGTGFAYAAGSDHRRDGQAVGC
Specific function: GGT PLAYS A KEY ROLE IN THE GAMMA-GLUTAMYL CYCLE, A PATHWAY FOR THE SYNTHESIS AND DEGRADATION OF GLUTATHIONE. [C]
COG id: COG0405
COG function: function code E; Gamma-glutamyltransferase
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the gamma-glutamyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI73915092, Length=544, Percent_Identity=25.1838235294118, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI73915090, Length=544, Percent_Identity=25.1838235294118, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI73915096, Length=544, Percent_Identity=25.1838235294118, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI73915094, Length=544, Percent_Identity=25.1838235294118, Blast_Score=119, Evalue=7e-27, Organism=Homo sapiens, GI153266885, Length=546, Percent_Identity=24.3589743589744, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI153266901, Length=547, Percent_Identity=24.1316270566728, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI113429326, Length=548, Percent_Identity=24.0875912408759, Blast_Score=105, Evalue=1e-22, Organism=Homo sapiens, GI113429324, Length=543, Percent_Identity=24.1252302025783, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI153266907, Length=540, Percent_Identity=23.7037037037037, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI109148539, Length=508, Percent_Identity=25.5905511811024, Blast_Score=90, Evalue=6e-18, Organism=Escherichia coli, GI1789856, Length=475, Percent_Identity=27.7894736842105, Blast_Score=161, Evalue=1e-40, Organism=Caenorhabditis elegans, GI17506189, Length=514, Percent_Identity=24.9027237354086, Blast_Score=115, Evalue=8e-26, Organism=Caenorhabditis elegans, GI72000294, Length=475, Percent_Identity=24.2105263157895, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI212646519, Length=470, Percent_Identity=24.468085106383, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI193208245, Length=496, Percent_Identity=25, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI193208247, Length=496, Percent_Identity=25, Blast_Score=104, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17542894, Length=482, Percent_Identity=22.1991701244813, Blast_Score=92, Evalue=5e-19, Organism=Drosophila melanogaster, GI24642670, Length=467, Percent_Identity=25.9100642398287, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI24642666, Length=467, Percent_Identity=25.9100642398287, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI161077880, Length=467, Percent_Identity=25.9100642398287, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI45551474, Length=467, Percent_Identity=25.9100642398287, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI161077878, Length=467, Percent_Identity=25.9100642398287, Blast_Score=117, Evalue=2e-26, Organism=Drosophila melanogaster, GI18859893, Length=510, Percent_Identity=24.1176470588235, Blast_Score=99, Evalue=5e-21, Organism=Drosophila melanogaster, GI18859741, Length=528, Percent_Identity=23.8636363636364, Blast_Score=90, Evalue=4e-18, Organism=Drosophila melanogaster, GI161077496, Length=489, Percent_Identity=24.7443762781186, Blast_Score=84, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000101 [H]
Pfam domain/function: PF01019 G_glu_transpept [H]
EC number: =2.3.2.2 [H]
Molecular weight: Translated: 55809; Mature: 55678
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWQLPYPSGRQPVLARNVVSTSQPLAAQAGAAAFARGGNAIDAALAAAITLTVVEPVMN CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GIGGDAFALVWDGAALHGLNASGRAPRAWSAERFAHLPQMPRIGWDTVTTPGGVAGWVAL CCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH SERFGALPFEDLFADAIRHARDGFPVSPVIARQWAQAAIDLKGQPGFEAFTPGGRAPQAG HHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC EIWRFADQADTLADIARTRGASFYRGRLAQAMADYARQHGAGLALEDLAAHAVEWVQSIS CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC VPFGDRTVHEIPPNGQGIAALMALGLLEHLPYRSTAAGSAARMHLEIEAMRVAFADLYAH CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHH VADPDHMRLTSAQLLDPAYLRQRAALIDPQRAGQYPAGQPGSGGTVYLCTADSEGRMVSF HCCCCCEEEHHHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHH IQSNFKGFGSGVVVPGTGIALHNRGMGFVTTPGHPNQVAGGKRPMHSIIPAFVTRGGQPH HHHHHCCCCCCEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCC MAFGVMGGNMQAQGHVQMVLREAVEGLNPQACSDAPRWRINDAGALTLEHTVPAAVVEGL EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHH RALGHDPQVAAPGSLEFGSAQIIRRLEATPGTGFAYAAGSDHRRDGQAVGC HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure TWQLPYPSGRQPVLARNVVSTSQPLAAQAGAAAFARGGNAIDAALAAAITLTVVEPVMN CCCCCCCCCCCCHHHHHHHHCCCCHHHHHCHHHHHCCCCHHHHHHHHHHHHHHHHHHHH GIGGDAFALVWDGAALHGLNASGRAPRAWSAERFAHLPQMPRIGWDTVTTPGGVAGWVAL CCCCCEEEEEECCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH SERFGALPFEDLFADAIRHARDGFPVSPVIARQWAQAAIDLKGQPGFEAFTPGGRAPQAG HHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCC EIWRFADQADTLADIARTRGASFYRGRLAQAMADYARQHGAGLALEDLAAHAVEWVQSIS CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC VPFGDRTVHEIPPNGQGIAALMALGLLEHLPYRSTAAGSAARMHLEIEAMRVAFADLYAH CCCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHH VADPDHMRLTSAQLLDPAYLRQRAALIDPQRAGQYPAGQPGSGGTVYLCTADSEGRMVSF HCCCCCEEEHHHHHCCHHHHHHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCHHH IQSNFKGFGSGVVVPGTGIALHNRGMGFVTTPGHPNQVAGGKRPMHSIIPAFVTRGGQPH HHHHHCCCCCCEEECCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCC MAFGVMGGNMQAQGHVQMVLREAVEGLNPQACSDAPRWRINDAGALTLEHTVPAAVVEGL EEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEECCCCHHHHHHHH RALGHDPQVAAPGSLEFGSAQIIRRLEATPGTGFAYAAGSDHRRDGQAVGC HHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]