| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is accC [H]
Identifier: 222102935
GI number: 222102935
Start: 622613
End: 624601
Strand: Direct
Name: accC [H]
Synonym: Avi_7691
Alternate gene names: 222102935
Gene position: 622613-624601 (Clockwise)
Preceding gene: 222102934
Following gene: 222102936
Centisome position: 98.55
GC content: 60.53
Gene sequence:
>1989_bases ATGTTTCAGAAAATCCTGATCGCCAATCGCGGCGAAATCGCCTGCCGCATTATCCGAACCGCGCGGCGCATGGGCATTGC CACCGTTGCCGTCTATTCGCAGGCTGACGCTGACGCACGCCATGTTCGGCTTGCGGATGAGGCCATTCTCATCGGCCCAG CACCGGCGCGGGAATCCTATCTTGTTGCCGAGAATATTCTTGCCGCTGCCCGTCGCACAGGTGCTGAGGCCATTCACCCC GGCTACGGCTTTCTATCTGAGAACGACGAGTTTGCCGAAGCTTGCGCTGCCAATGGCATCGCCTTTATCGGGCCGCCCGC CGCTGCCATCCGTGCCATGGGATCAAAATCGGCAGCAAAAGAGCTGATGGGCAAGGTCGGGGTGCCGCTTGTGCCCGGCT ATCACGGTGCGGACAATGATCCGGCACGGTTGCGGCGAGAGGGTGATCACATCGGCTATCCCGTATTGATCAAGGCCTCC GCAGGCGGTGGCGGCAAGGGCATGCGGCGGGTTGATCGCGCAGACGATTTTGCCGATGCGCTGGCATCCTGCCAGCGTGA AGCGCGCAATGCCTTCGGCGATGATCATGTGCTGATCGAGAAATACATTCTCAAGCCGCGCCACATCGAAATTCAGGTTT TTGCCGATTCGAGTGGCCACTGCATCCATCTTTATGAGCGCGATTGCTCGGTGCAGCGCCGCCACCAGAAAGTTCTGGAA GAGGCACCCGCGCCGGGAATGACCGCAGAGCGGCGCGCAGCCATGGGTGCTGCTGCCGTGACGGCAGCAAAGGCGGTTAA CTATGTCGGTGCCGGAACCGTGGAGTTCATCGTCAATAGCGATGGATCTTTTTACTTCATGGAGATGAACACCCGCCTGC AAGTGGAGCATCCGGTTACGGAAATGGTGACCGGGCTGGACCTTGTTGAGTGGCAGCTGCGCATTGCCGCAGGCCACCCC TTGCCCTTGCGGCAGGAGGATGTGCCGCTGATGGGGCATGCCATCGAGGCCCGCATCTATGCCGAGGATGCAGATGCAGG CTTTCTGCCGTCCATCGGCACCCTCCGACATCTGGGACTGCCGCAGCAAAATGCACATGTGCGCATCGATAGCGCCGTAG AGACAGGGGATGCGATCTCACCCCATTACGACCCCATGATCGCCAAGCTGATCGTGCATGGAGCAGACCGCAAAGAAGCG CTAGATCGCATGAGCGAAGCCCTTAGCGCAATCCAGATTGTTGGCCTGACGGCGAATATCGGCTTTCTGCACCGCCTCAT AAAGACCCCGTCTTTCGCTGAGGCCGATCTCGACACCGGGCTGATTGAGCGCGAACAGGACAGATTGTTTGCCCTATCCC CCGTGCCTGCCGGGGTCTGGTATCTGGCGGCTTTGCAAGAGCTTTTGCGGGACATTTCTGCCAACCCTGCATCGCCTTGG GCGCTGGCTGATGGCTGGCGGCTGACCGGCCGGGCGGAACGGCGGATCGCACTGTGCTGCAAAGGCGAAACGGTCACAGT CACCGCCGTTTTCTCCGGTGAGGGTTGGACTCTGGCCCTGTCCGGCACGGATGAGCCATCGACCTTTGCGCAAGGCCATG CCAGCCAAAACGGGCCAGCAACGGCGCTCGATGTGCGCATTGGCGAGCGGCGTTACGACGCGACGATCATGATCGATGGG AACCATCGTCATGTGTTCTATACCGGACAAACCTTTGTGGTGGAACGCTTGCCCGACCTGCAACGTGCCACCGACACCAA CAGTGGCAGCGGCGGCCTGCGCGCGCCGATGCCCGGCGCGATCATCGCGCTGCTTGCCGAGCCGGGGGTCTCCTTGAAAA CAGGGGAACCGTTGCTGGTCATGGAGGCAATGAAAATGGAACACACAATAGTTGCGCCATCCGATGGCACGCTTGCCAGC TTCCATTTTGCGGTTGGCGATCAGGTGGTGGCCGGCGCGGAGCTGGTTGATTTCCAGCCCGCCGCATAA
Upstream 100 bases:
>100_bases GCCGAGGCACGGATGAAGCCCGCGAGGGTCTTTCGGCCTTTCTGGAAAAACGCAAACCCGGCTGGATCGCGGATCGGAAA GAAGGGTGAAGGATCAAACC
Downstream 100 bases:
>100_bases GGACAAGATCATGCACCAAACCAGCGGCGACAACATCGTCATTGTCGAGGTCGGCCCAAGAGACGGCTTGCAAAACGAAG CCGCTATTGTTTCCACCGAT
Product: acetyl-CoA carboxylase biotin carboxylase
Products: NA
Alternate protein names: Biotin carboxylase; Biotin carboxyl carrier protein; BCCP [H]
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MFQKILIANRGEIACRIIRTARRMGIATVAVYSQADADARHVRLADEAILIGPAPARESYLVAENILAAARRTGAEAIHP GYGFLSENDEFAEACAANGIAFIGPPAAAIRAMGSKSAAKELMGKVGVPLVPGYHGADNDPARLRREGDHIGYPVLIKAS AGGGGKGMRRVDRADDFADALASCQREARNAFGDDHVLIEKYILKPRHIEIQVFADSSGHCIHLYERDCSVQRRHQKVLE EAPAPGMTAERRAAMGAAAVTAAKAVNYVGAGTVEFIVNSDGSFYFMEMNTRLQVEHPVTEMVTGLDLVEWQLRIAAGHP LPLRQEDVPLMGHAIEARIYAEDADAGFLPSIGTLRHLGLPQQNAHVRIDSAVETGDAISPHYDPMIAKLIVHGADRKEA LDRMSEALSAIQIVGLTANIGFLHRLIKTPSFAEADLDTGLIEREQDRLFALSPVPAGVWYLAALQELLRDISANPASPW ALADGWRLTGRAERRIALCCKGETVTVTAVFSGEGWTLALSGTDEPSTFAQGHASQNGPATALDVRIGERRYDATIMIDG NHRHVFYTGQTFVVERLPDLQRATDTNSGSGGLRAPMPGAIIALLAEPGVSLKTGEPLLVMEAMKMEHTIVAPSDGTLAS FHFAVGDQVVAGAELVDFQPAA
Sequences:
>Translated_662_residues MFQKILIANRGEIACRIIRTARRMGIATVAVYSQADADARHVRLADEAILIGPAPARESYLVAENILAAARRTGAEAIHP GYGFLSENDEFAEACAANGIAFIGPPAAAIRAMGSKSAAKELMGKVGVPLVPGYHGADNDPARLRREGDHIGYPVLIKAS AGGGGKGMRRVDRADDFADALASCQREARNAFGDDHVLIEKYILKPRHIEIQVFADSSGHCIHLYERDCSVQRRHQKVLE EAPAPGMTAERRAAMGAAAVTAAKAVNYVGAGTVEFIVNSDGSFYFMEMNTRLQVEHPVTEMVTGLDLVEWQLRIAAGHP LPLRQEDVPLMGHAIEARIYAEDADAGFLPSIGTLRHLGLPQQNAHVRIDSAVETGDAISPHYDPMIAKLIVHGADRKEA LDRMSEALSAIQIVGLTANIGFLHRLIKTPSFAEADLDTGLIEREQDRLFALSPVPAGVWYLAALQELLRDISANPASPW ALADGWRLTGRAERRIALCCKGETVTVTAVFSGEGWTLALSGTDEPSTFAQGHASQNGPATALDVRIGERRYDATIMIDG NHRHVFYTGQTFVVERLPDLQRATDTNSGSGGLRAPMPGAIIALLAEPGVSLKTGEPLLVMEAMKMEHTIVAPSDGTLAS FHFAVGDQVVAGAELVDFQPAA >Mature_662_residues MFQKILIANRGEIACRIIRTARRMGIATVAVYSQADADARHVRLADEAILIGPAPARESYLVAENILAAARRTGAEAIHP GYGFLSENDEFAEACAANGIAFIGPPAAAIRAMGSKSAAKELMGKVGVPLVPGYHGADNDPARLRREGDHIGYPVLIKAS AGGGGKGMRRVDRADDFADALASCQREARNAFGDDHVLIEKYILKPRHIEIQVFADSSGHCIHLYERDCSVQRRHQKVLE EAPAPGMTAERRAAMGAAAVTAAKAVNYVGAGTVEFIVNSDGSFYFMEMNTRLQVEHPVTEMVTGLDLVEWQLRIAAGHP LPLRQEDVPLMGHAIEARIYAEDADAGFLPSIGTLRHLGLPQQNAHVRIDSAVETGDAISPHYDPMIAKLIVHGADRKEA LDRMSEALSAIQIVGLTANIGFLHRLIKTPSFAEADLDTGLIEREQDRLFALSPVPAGVWYLAALQELLRDISANPASPW ALADGWRLTGRAERRIALCCKGETVTVTAVFSGEGWTLALSGTDEPSTFAQGHASQNGPATALDVRIGERRYDATIMIDG NHRHVFYTGQTFVVERLPDLQRATDTNSGSGGLRAPMPGAIIALLAEPGVSLKTGEPLLVMEAMKMEHTIVAPSDGTLAS FHFAVGDQVVAGAELVDFQPAA
Specific function: This protein carries two functions:biotin carboxyl carrier protein and biotin carboxyltransferase [H]
COG id: COG4770
COG function: function code I; Acetyl/propionyl-CoA carboxylase, alpha subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 biotinyl-binding domain [H]
Homologues:
Organism=Homo sapiens, GI116805327, Length=669, Percent_Identity=47.3841554559043, Blast_Score=594, Evalue=1e-170, Organism=Homo sapiens, GI65506442, Length=682, Percent_Identity=42.375366568915, Blast_Score=497, Evalue=1e-140, Organism=Homo sapiens, GI189095269, Length=682, Percent_Identity=42.375366568915, Blast_Score=497, Evalue=1e-140, Organism=Homo sapiens, GI295821183, Length=675, Percent_Identity=41.4814814814815, Blast_Score=465, Evalue=1e-131, Organism=Homo sapiens, GI106049528, Length=458, Percent_Identity=42.1397379912664, Blast_Score=348, Evalue=7e-96, Organism=Homo sapiens, GI106049295, Length=458, Percent_Identity=42.1397379912664, Blast_Score=348, Evalue=7e-96, Organism=Homo sapiens, GI106049292, Length=458, Percent_Identity=42.1397379912664, Blast_Score=348, Evalue=7e-96, Organism=Homo sapiens, GI38679960, Length=718, Percent_Identity=31.6155988857939, Blast_Score=290, Evalue=4e-78, Organism=Homo sapiens, GI38679977, Length=718, Percent_Identity=31.6155988857939, Blast_Score=290, Evalue=4e-78, Organism=Homo sapiens, GI38679967, Length=718, Percent_Identity=31.6155988857939, Blast_Score=290, Evalue=4e-78, Organism=Homo sapiens, GI38679971, Length=716, Percent_Identity=31.7039106145251, Blast_Score=290, Evalue=4e-78, Organism=Homo sapiens, GI38679974, Length=716, Percent_Identity=31.7039106145251, Blast_Score=289, Evalue=5e-78, Organism=Homo sapiens, GI134142062, Length=505, Percent_Identity=33.4653465346535, Blast_Score=259, Evalue=7e-69, Organism=Escherichia coli, GI1789654, Length=446, Percent_Identity=50.6726457399103, Blast_Score=405, Evalue=1e-114, Organism=Caenorhabditis elegans, GI71987519, Length=660, Percent_Identity=45.6060606060606, Blast_Score=547, Evalue=1e-156, Organism=Caenorhabditis elegans, GI17567343, Length=692, Percent_Identity=41.7630057803468, Blast_Score=469, Evalue=1e-132, Organism=Caenorhabditis elegans, GI17562816, Length=458, Percent_Identity=42.5764192139738, Blast_Score=345, Evalue=5e-95, Organism=Caenorhabditis elegans, GI71997163, Length=507, Percent_Identity=29.7830374753452, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI71997168, Length=507, Percent_Identity=29.7830374753452, Blast_Score=210, Evalue=1e-54, Organism=Caenorhabditis elegans, GI133931226, Length=491, Percent_Identity=28.5132382892057, Blast_Score=202, Evalue=4e-52, Organism=Saccharomyces cerevisiae, GI6319685, Length=447, Percent_Identity=43.8478747203579, Blast_Score=390, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6319695, Length=560, Percent_Identity=39.1071428571429, Blast_Score=325, Evalue=2e-89, Organism=Saccharomyces cerevisiae, GI6321376, Length=457, Percent_Identity=43.3260393873085, Blast_Score=320, Evalue=5e-88, Organism=Saccharomyces cerevisiae, GI6324343, Length=729, Percent_Identity=29.6296296296296, Blast_Score=263, Evalue=6e-71, Organism=Saccharomyces cerevisiae, GI6323863, Length=456, Percent_Identity=33.3333333333333, Blast_Score=237, Evalue=5e-63, Organism=Drosophila melanogaster, GI24651757, Length=665, Percent_Identity=47.8195488721804, Blast_Score=595, Evalue=1e-170, Organism=Drosophila melanogaster, GI24651759, Length=628, Percent_Identity=46.8152866242038, Blast_Score=545, Evalue=1e-155, Organism=Drosophila melanogaster, GI24652212, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652210, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652214, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI19921944, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652216, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI281363050, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652224, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652222, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652220, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI24652218, Length=462, Percent_Identity=42.2077922077922, Blast_Score=341, Evalue=1e-93, Organism=Drosophila melanogaster, GI161076409, Length=706, Percent_Identity=29.4617563739377, Blast_Score=246, Evalue=5e-65, Organism=Drosophila melanogaster, GI24586458, Length=706, Percent_Identity=29.4617563739377, Blast_Score=245, Evalue=6e-65, Organism=Drosophila melanogaster, GI161076407, Length=706, Percent_Identity=29.4617563739377, Blast_Score=245, Evalue=7e-65, Organism=Drosophila melanogaster, GI24586460, Length=706, Percent_Identity=29.4617563739377, Blast_Score=245, Evalue=7e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR001882 - InterPro: IPR011764 - InterPro: IPR005482 - InterPro: IPR000089 - InterPro: IPR005479 - InterPro: IPR005481 - InterPro: IPR013817 - InterPro: IPR016185 - InterPro: IPR011054 - InterPro: IPR011053 [H]
Pfam domain/function: PF02785 Biotin_carb_C; PF00364 Biotin_lipoyl; PF00289 CPSase_L_chain; PF02786 CPSase_L_D2 [H]
EC number: =6.3.4.14 [H]
Molecular weight: Translated: 71062; Mature: 71062
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: PS50975 ATP_GRASP ; PS00866 CPSASE_1 ; PS00867 CPSASE_2 ; PS50979 BC ; PS50968 BIOTINYL_LIPOYL ; PS00188 BIOTIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFQKILIANRGEIACRIIRTARRMGIATVAVYSQADADARHVRLADEAILIGPAPARESY CCCEEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEECCEEEECCCCCCCCC LVAENILAAARRTGAEAIHPGYGFLSENDEFAEACAANGIAFIGPPAAAIRAMGSKSAAK HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHCCHHHHH ELMGKVGVPLVPGYHGADNDPARLRREGDHIGYPVLIKASAGGGGKGMRRVDRADDFADA HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LASCQREARNAFGDDHVLIEKYILKPRHIEIQVFADSSGHCIHLYERDCSVQRRHQKVLE HHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHH EAPAPGMTAERRAAMGAAAVTAAKAVNYVGAGTVEFIVNSDGSFYFMEMNTRLQVEHPVT HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCEEEECCCHH EMVTGLDLVEWQLRIAAGHPLPLRQEDVPLMGHAIEARIYAEDADAGFLPSIGTLRHLGL HHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCC PQQNAHVRIDSAVETGDAISPHYDPMIAKLIVHGADRKEALDRMSEALSAIQIVGLTANI CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECCH GFLHRLIKTPSFAEADLDTGLIEREQDRLFALSPVPAGVWYLAALQELLRDISANPASPW HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC ALADGWRLTGRAERRIALCCKGETVTVTAVFSGEGWTLALSGTDEPSTFAQGHASQNGPA EECCCEEECCCCCCEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCCCC TALDVRIGERRYDATIMIDGNHRHVFYTGQTFVVERLPDLQRATDTNSGSGGLRAPMPGA EEEEEEECCEEECEEEEEECCCEEEEEECCEEEEHHCCCHHHHCCCCCCCCCCCCCCCCE IIALLAEPGVSLKTGEPLLVMEAMKMEHTIVAPSDGTLASFHFAVGDQVVAGAELVDFQP EEEEEECCCCCEECCCCEEEEEHHCCCEEEECCCCCCEEEEEEECCCCEECCCEEECCCC AA CC >Mature Secondary Structure MFQKILIANRGEIACRIIRTARRMGIATVAVYSQADADARHVRLADEAILIGPAPARESY CCCEEEEECCCHHHHHHHHHHHHCCEEEEEEEECCCCCCCEEEEECCEEEECCCCCCCCC LVAENILAAARRTGAEAIHPGYGFLSENDEFAEACAANGIAFIGPPAAAIRAMGSKSAAK HHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCHHHHHHHCCHHHHH ELMGKVGVPLVPGYHGADNDPARLRREGDHIGYPVLIKASAGGGGKGMRRVDRADDFADA HHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHH LASCQREARNAFGDDHVLIEKYILKPRHIEIQVFADSSGHCIHLYERDCSVQRRHQKVLE HHHHHHHHHHCCCCCCEEHHHHHCCCCEEEEEEEECCCCCEEEEEECCCHHHHHHHHHHH EAPAPGMTAERRAAMGAAAVTAAKAVNYVGAGTVEFIVNSDGSFYFMEMNTRLQVEHPVT HCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEECCEEEECCCHH EMVTGLDLVEWQLRIAAGHPLPLRQEDVPLMGHAIEARIYAEDADAGFLPSIGTLRHLGL HHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCHHHHHCCC PQQNAHVRIDSAVETGDAISPHYDPMIAKLIVHGADRKEALDRMSEALSAIQIVGLTANI CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECCH GFLHRLIKTPSFAEADLDTGLIEREQDRLFALSPVPAGVWYLAALQELLRDISANPASPW HHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCC ALADGWRLTGRAERRIALCCKGETVTVTAVFSGEGWTLALSGTDEPSTFAQGHASQNGPA EECCCEEECCCCCCEEEEEECCCEEEEEEEECCCCEEEEECCCCCCCHHHCCCCCCCCCC TALDVRIGERRYDATIMIDGNHRHVFYTGQTFVVERLPDLQRATDTNSGSGGLRAPMPGA EEEEEEECCEEECEEEEEECCCEEEEEECCEEEEHHCCCHHHHCCCCCCCCCCCCCCCCE IIALLAEPGVSLKTGEPLLVMEAMKMEHTIVAPSDGTLASFHFAVGDQVVAGAELVDFQP EEEEEECCCCCEECCCCEEEEEHHCCCEEEECCCCCCEEEEEEECCCCEECCCEEECCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]