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The map label for this gene is 222102926

Identifier: 222102926

GI number: 222102926

Start: 611605

End: 612105

Strand: Reverse

Name: 222102926

Synonym: Avi_7681

Alternate gene names: NA

Gene position: 612105-611605 (Counterclockwise)

Preceding gene: 222102927

Following gene: 222102922

Centisome position: 96.89

GC content: 59.08

Gene sequence:

>501_bases
GTGAAAACTGGCGCACGCTGCCCGCAAGACCGCATATCCAGTCCGACGACCACACGCGATGGCGTCGAAATTCTCGATAT
CTCGAATTACACGCCCTTCTTCTTGTCCAGCATCAACAATGCCCTATCGCGTGGGGCCTCAAGCGTTTACCGTGAGCGCT
TCGGCATCGGTATCAGCGAGTGGCGCGCGGTATCCATGCTGGCGATCGAGCCCAACATCACGGCGGGGCGCATCTGTGAT
GTCATCAATCTTGACAAGGCCGCCGCAAGCCGCGCTCTGGCGACGCTCGATGAGCAGGGCTATCTCGACTCGGAGGTCTC
GGAGACGGACCCGCGCAAGAAGCGCTGGCGCCTGAACCAGAGGGGCTATGACCTTCACGAAGAGATCATGCGGATCGCGC
TCGCGCGTGAGGAAACATTGATTGAGGGTGCAGATCCCCAGGACCTCGAGGCAACCATCCGGGTGATGCGGATCATGTTG
AAAAACGTGCAGAACCTGTAA

Upstream 100 bases:

>100_bases
CCGATGAGCTTGTGCAATGCAACTATGATATCACGGCACTGTCGAAATCGAGGAAAGCACGCGCCGCATGACATCTGCCA
AGAGGCCAACAAGCGTGCGG

Downstream 100 bases:

>100_bases
GCACCCAGCCCCTGCGGTCATAGTGAGCCCAAACGCCCGTGTTCTTCGCCAAGGATGCAAATTGAAGTAGGTGTTCATTG
CCTGCAGTTTTCGGAGCGGA

Product: CbaR

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR/EmrR Family Transcriptional Regulator; Transcriptional Regulator; MarR Family Regulatory Protein; Transcriptional Regulator Marr Family Protein; Transcriptional Regulator MarR/EmrR Family; Transcriptional Regulator MarR Family Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MKTGARCPQDRISSPTTTRDGVEILDISNYTPFFLSSINNALSRGASSVYRERFGIGISEWRAVSMLAIEPNITAGRICD
VINLDKAAASRALATLDEQGYLDSEVSETDPRKKRWRLNQRGYDLHEEIMRIALAREETLIEGADPQDLEATIRVMRIML
KNVQNL

Sequences:

>Translated_166_residues
MKTGARCPQDRISSPTTTRDGVEILDISNYTPFFLSSINNALSRGASSVYRERFGIGISEWRAVSMLAIEPNITAGRICD
VINLDKAAASRALATLDEQGYLDSEVSETDPRKKRWRLNQRGYDLHEEIMRIALAREETLIEGADPQDLEATIRVMRIML
KNVQNL
>Mature_166_residues
MKTGARCPQDRISSPTTTRDGVEILDISNYTPFFLSSINNALSRGASSVYRERFGIGISEWRAVSMLAIEPNITAGRICD
VINLDKAAASRALATLDEQGYLDSEVSETDPRKKRWRLNQRGYDLHEEIMRIALAREETLIEGADPQDLEATIRVMRIML
KNVQNL

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18672; Mature: 18672

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGARCPQDRISSPTTTRDGVEILDISNYTPFFLSSINNALSRGASSVYRERFGIGISE
CCCCCCCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
WRAVSMLAIEPNITAGRICDVINLDKAAASRALATLDEQGYLDSEVSETDPRKKRWRLNQ
HHEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
RGYDLHEEIMRIALAREETLIEGADPQDLEATIRVMRIMLKNVQNL
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTGARCPQDRISSPTTTRDGVEILDISNYTPFFLSSINNALSRGASSVYRERFGIGISE
CCCCCCCCHHHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
WRAVSMLAIEPNITAGRICDVINLDKAAASRALATLDEQGYLDSEVSETDPRKKRWRLNQ
HHEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
RGYDLHEEIMRIALAREETLIEGADPQDLEATIRVMRIMLKNVQNL
CCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA