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The map label for this gene is ybgK [H]

Identifier: 222102908

GI number: 222102908

Start: 593064

End: 594062

Strand: Direct

Name: ybgK [H]

Synonym: Avi_7658

Alternate gene names: 222102908

Gene position: 593064-594062 (Clockwise)

Preceding gene: 222102907

Following gene: 222102909

Centisome position: 93.87

GC content: 59.96

Gene sequence:

>999_bases
ATGATCGAGGTTCTCACCACTGGCCCCCTCAACACCGTGCAGGATCTTGGCCGTTTTGGATTTCGCAACATCGGCGTCAC
CACCTGTGGCGCGATGGACCCTGTTGCGCTGAAAATCGGCAATCTGATGCTGGGCAATGATGAGGGGGCCGCAGGCCTTG
AGATTCAGACCTTTCCCTTTCGGCTGCGGTTTGAAAAGGACGGTTTTGTCGCTATCACCGGAGCCGACTGCGCGGCAACG
CTGGACGGCAAAGCCATGCCGCCATGGTGGGCGCTTCCGGTTTTCGCAGGGCAAGAGCTTGAGCTGAAAACACCCACCAA
AGCGGCTCGGGCCTATCTGTGCTTTTCCGGTGGCATTGATGTGCCGCTGGTGATGGGGTCTCGCAGCACGTCGTTGCGGG
GAGCCTTTGGCGGTTATCACGGGCGGTTTTTGGCGGTTGGTGATCGTCTCGCTTTAGGTGAGGCGCAGGCTCTGCCGATC
CCATCCTCCGGTTTCGGCGTGATGCCGCCAGAGGTGGCATTGCAGGATCATTTTCCAGCGGTTGAGAATGGCATTTTGCC
CATCCGCGCCCTGCCCGCAGGCGAGCATGACTGGTTTGGCGAAGAATCGATGCGGTTCTGGGCGCAGGATTGGAAAATCT
CCTCCCAGAGCGACCGCACCGGCTATCGCCTGTCTGGCGCTCCGGTGAAGCTCAAGGAGCATGTTGAAATGCGCTCCCAT
GGCGTGGTCACAGGCGTGGTGCAGGTGCCGCCTGCGGGTGAGCCGATCATTCAAATGAGCGATGCCAATACCGCAGGCGG
TTATCCCAAAATGGCGGGTGTGATTGACATTGACCTCTGGCGCTTGGGCCAAGCCCGCATTGGCAGCCGCATCCGCTTTG
TTCAATCCACTCTGGCTGAGGCGAAAGCCGCAGAACAAGCCGTGGCGGGCTATTTGGCCGACATTCGCAACACCGTGCCG
CTGTTGACCGACGCCCTCGCCACCATGACCAAGCGCTAA

Upstream 100 bases:

>100_bases
TCGGCTTTGCCGACGTGCCGATGTTTGATCCCATGGCGGCCTCGCCTGCCCTGCTGGCTCCCGGCGATACGGTGCGCTTT
ATTGCCGAGAGGATCGAGCT

Downstream 100 bases:

>100_bases
ATCTGAGGATAGATGATGAAGATTGATCTCAATTCCGATATGGGCGAAGGCTTTGGTCCCTACCGCCTGTGTGACGATGA
AGCACTGATGGATGTTGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MIEVLTTGPLNTVQDLGRFGFRNIGVTTCGAMDPVALKIGNLMLGNDEGAAGLEIQTFPFRLRFEKDGFVAITGADCAAT
LDGKAMPPWWALPVFAGQELELKTPTKAARAYLCFSGGIDVPLVMGSRSTSLRGAFGGYHGRFLAVGDRLALGEAQALPI
PSSGFGVMPPEVALQDHFPAVENGILPIRALPAGEHDWFGEESMRFWAQDWKISSQSDRTGYRLSGAPVKLKEHVEMRSH
GVVTGVVQVPPAGEPIIQMSDANTAGGYPKMAGVIDIDLWRLGQARIGSRIRFVQSTLAEAKAAEQAVAGYLADIRNTVP
LLTDALATMTKR

Sequences:

>Translated_332_residues
MIEVLTTGPLNTVQDLGRFGFRNIGVTTCGAMDPVALKIGNLMLGNDEGAAGLEIQTFPFRLRFEKDGFVAITGADCAAT
LDGKAMPPWWALPVFAGQELELKTPTKAARAYLCFSGGIDVPLVMGSRSTSLRGAFGGYHGRFLAVGDRLALGEAQALPI
PSSGFGVMPPEVALQDHFPAVENGILPIRALPAGEHDWFGEESMRFWAQDWKISSQSDRTGYRLSGAPVKLKEHVEMRSH
GVVTGVVQVPPAGEPIIQMSDANTAGGYPKMAGVIDIDLWRLGQARIGSRIRFVQSTLAEAKAAEQAVAGYLADIRNTVP
LLTDALATMTKR
>Mature_332_residues
MIEVLTTGPLNTVQDLGRFGFRNIGVTTCGAMDPVALKIGNLMLGNDEGAAGLEIQTFPFRLRFEKDGFVAITGADCAAT
LDGKAMPPWWALPVFAGQELELKTPTKAARAYLCFSGGIDVPLVMGSRSTSLRGAFGGYHGRFLAVGDRLALGEAQALPI
PSSGFGVMPPEVALQDHFPAVENGILPIRALPAGEHDWFGEESMRFWAQDWKISSQSDRTGYRLSGAPVKLKEHVEMRSH
GVVTGVVQVPPAGEPIIQMSDANTAGGYPKMAGVIDIDLWRLGQARIGSRIRFVQSTLAEAKAAEQAVAGYLADIRNTVP
LLTDALATMTKR

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=316, Percent_Identity=43.3544303797468, Blast_Score=246, Evalue=2e-66,
Organism=Saccharomyces cerevisiae, GI6319685, Length=318, Percent_Identity=29.874213836478, Blast_Score=134, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 35537; Mature: 35537

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEVLTTGPLNTVQDLGRFGFRNIGVTTCGAMDPVALKIGNLMLGNDEGAAGLEIQTFPF
CEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEECCEEEECCCCCCCEEEEECCE
RLRFEKDGFVAITGADCAATLDGKAMPPWWALPVFAGQELELKTPTKAARAYLCFSGGID
EEEECCCCEEEEECCCEEEECCCCCCCCEEECCEECCCEEEECCCHHHHEEEEEEECCCC
VPLVMGSRSTSLRGAFGGYHGRFLAVGDRLALGEAQALPIPSSGFGVMPPEVALQDHFPA
EEEEECCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCH
VENGILPIRALPAGEHDWFGEESMRFWAQDWKISSQSDRTGYRLSGAPVKLKEHVEMRSH
HHCCCEEEEECCCCCCCCCCCHHHHHHHHCCEECCCCCCCCEEECCCCEEHHHHHHHHHC
GVVTGVVQVPPAGEPIIQMSDANTAGGYPKMAGVIDIDLWRLGQARIGSRIRFVQSTLAE
CEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHH
AKAAEQAVAGYLADIRNTVPLLTDALATMTKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEVLTTGPLNTVQDLGRFGFRNIGVTTCGAMDPVALKIGNLMLGNDEGAAGLEIQTFPF
CEEEEECCCCHHHHHHHHHCCCCCCEEECCCCCCEEEEECCEEEECCCCCCCEEEEECCE
RLRFEKDGFVAITGADCAATLDGKAMPPWWALPVFAGQELELKTPTKAARAYLCFSGGID
EEEECCCCEEEEECCCEEEECCCCCCCCEEECCEECCCEEEECCCHHHHEEEEEEECCCC
VPLVMGSRSTSLRGAFGGYHGRFLAVGDRLALGEAQALPIPSSGFGVMPPEVALQDHFPA
EEEEECCCCCCCCCCCCCCCCEEEEECCEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCH
VENGILPIRALPAGEHDWFGEESMRFWAQDWKISSQSDRTGYRLSGAPVKLKEHVEMRSH
HHCCCEEEEECCCCCCCCCCCHHHHHHHHCCEECCCCCCCCEEECCCCEEHHHHHHHHHC
GVVTGVVQVPPAGEPIIQMSDANTAGGYPKMAGVIDIDLWRLGQARIGSRIRFVQSTLAE
CEEEEEEECCCCCCCEEEECCCCCCCCCCCCCEEEEEEHHHCCHHHHHHHHHHHHHHHHH
AKAAEQAVAGYLADIRNTVPLLTDALATMTKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]