Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102906

Identifier: 222102906

GI number: 222102906

Start: 591914

End: 592357

Strand: Direct

Name: 222102906

Synonym: Avi_7656

Alternate gene names: NA

Gene position: 591914-592357 (Clockwise)

Preceding gene: 222102905

Following gene: 222102907

Centisome position: 93.69

GC content: 56.08

Gene sequence:

>444_bases
ATGACAACACGCACTCGTTCCAAATCCCGATCCGCCGCGGATTTCACCAGTCCAGAGGTGATCGCAACGCTCACAGCATG
GTTGGAGCAGGCCGGTGTCAGCACCATCGCCATTGAGCGCGACGATCAGCAGATCAAAATCGTGATGGCGGGAGGGGCAG
CCCAAATTTCACTCCAGACGCGAGATAAGCAAAAACCTGCTTCATCCGTTGCGGTTAAGGCTCCCTGCGTGGGGCATTTT
CTGGCCCATCACCCAGCTCGCGCCGATGAAGCGGCAAAAGATGGGCCTGTGGTCAAAGCAGGCGATACGGTCGGCTTTGT
CAAAATTGGCCCCGTACTTCTGAATGTTATCGCACCGCAAGACGGCATTCTTGGCGAAGCCTTGGTCAAAAGCGGCACCC
TCGTTGGCTATGGCGACCCTTTGTTTTTGGTCGAACAACCCTGA

Upstream 100 bases:

>100_bases
ATATCGCGCTGCATAAGGCGATTTTTGAAGATGCGGGCTTTTGCGCGGGTGGGGCCGATATCCACCATCTTGAAAAATGG
TTGAGCAAGCGGAGCGCAGC

Downstream 100 bases:

>100_bases
TGGCGACAATGGATATGAAAACCCTGACACATCCCGCAGTGATTGCTTCCTCCACAGCGGATATGCCGAAAATCTCTGCC
ATTGGCACCAAAGCCTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MTTRTRSKSRSAADFTSPEVIATLTAWLEQAGVSTIAIERDDQQIKIVMAGGAAQISLQTRDKQKPASSVAVKAPCVGHF
LAHHPARADEAAKDGPVVKAGDTVGFVKIGPVLLNVIAPQDGILGEALVKSGTLVGYGDPLFLVEQP

Sequences:

>Translated_147_residues
MTTRTRSKSRSAADFTSPEVIATLTAWLEQAGVSTIAIERDDQQIKIVMAGGAAQISLQTRDKQKPASSVAVKAPCVGHF
LAHHPARADEAAKDGPVVKAGDTVGFVKIGPVLLNVIAPQDGILGEALVKSGTLVGYGDPLFLVEQP
>Mature_146_residues
TTRTRSKSRSAADFTSPEVIATLTAWLEQAGVSTIAIERDDQQIKIVMAGGAAQISLQTRDKQKPASSVAVKAPCVGHFL
AHHPARADEAAKDGPVVKAGDTVGFVKIGPVLLNVIAPQDGILGEALVKSGTLVGYGDPLFLVEQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15356; Mature: 15225

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: PS50968 BIOTINYL_LIPOYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTRTRSKSRSAADFTSPEVIATLTAWLEQAGVSTIAIERDDQQIKIVMAGGAAQISLQT
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCEEEEEEC
RDKQKPASSVAVKAPCVGHFLAHHPARADEAAKDGPVVKAGDTVGFVKIGPVLLNVIAPQ
CCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCEEEEEECCC
DGILGEALVKSGTLVGYGDPLFLVEQP
CCCHHHHHHHCCCEEEECCEEEEEECC
>Mature Secondary Structure 
TTRTRSKSRSAADFTSPEVIATLTAWLEQAGVSTIAIERDDQQIKIVMAGGAAQISLQT
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEECCCEEEEEEC
RDKQKPASSVAVKAPCVGHFLAHHPARADEAAKDGPVVKAGDTVGFVKIGPVLLNVIAPQ
CCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCEEEECCCEEEEEECCEEEEEECCC
DGILGEALVKSGTLVGYGDPLFLVEQP
CCCHHHHHHHCCCEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA