| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is 222102901
Identifier: 222102901
GI number: 222102901
Start: 586099
End: 587901
Strand: Direct
Name: 222102901
Synonym: Avi_7650
Alternate gene names: NA
Gene position: 586099-587901 (Clockwise)
Preceding gene: 222102900
Following gene: 222102903
Centisome position: 92.77
GC content: 57.46
Gene sequence:
>1803_bases ATGCTTGATATCAGCCCAGCTACCAAGATAGACACGGTTTTGTCGAAGCTCGGCAAAGCGCTTGAAAGCGGCGACATTGA TGCCGCCGTCAACCTGTTTCAGACCGATTGCTATTGGCGCGATCTGGTGACATTCACCTGGAACCTTAAGACACTCGAGG GTCACGAGCAGATCCGAGAGATGCTGAAGAGCCAGCTTGGCGCCATCACACCCTCGAATTTCGTACAGGATCCAAAAGAG CCCGCCACTGATGCTGGTGGGATCACTGACGGCTGGTTCGAGTTCGAAACGGGCGTCGCACGCGGTTACGGACATATCCG CCTGAAGGATGGGCGGATATGGACCCTCTTGACCACCATGACCGAATTGAAGGGCCATGAAGAGCCGAAAGGCATCCGCC GCCCGATGGGGGCCGAGCACGGCCATGACCGTAACCGCATGACCTGGAAAGAAAAGCGCGAGAGCGAGAGCGCCGAGCTG GGCTATTCGGCGCAACCCTATGTCGTTATCATCGGTGGCGGCCAGGGAGGCATTGCCCTTGGCGCACGGCTTCGCCAGCT GGGTGTGCCAACAATCATCATCGAGAAGAACGAGCGCCCGGGCGACAGCTGGCGCAAGCGCTACAAGTCACTCTGCCTGC ACGACCCCGTCTGGTACGATCATTTGCCGTATATTCCCTTCCCGGAAAACTGGCCCGTCTTCACCCCGAAGGACAAGGTA GGCGACTGGCTGGAAATGTATACCAAAGTCATGGAGTTGAACTACTGGAGCTCCACGACCTGCAAGTCGGCGCAATTCGA TGAAGCGACCGGCGAATGGACAGTCATTGTTGAACGCGCCGGCAAGGAAATCGTGCTCAAGCCAAAGCAGCTGGTGCTGG CGACGGGCATGTCGGGCAAGGCCAATGTGCCGAATTTCCCCGGTCAGGATGTGTTCAAGGGTGAACAGCAACATTCCTCG CAACATCCGGGGCCTGATGCCTATGCCGGCAAGCGAGTGGTGGTGATCGGCTCCAACAATTCCGCCCACGATATCTGCGC AGCGCTCTGGGAAGCCGGCGCCGATGTCACCATGCTGCAACGGTCATCCACCCATATCGTCAAATCGGGTTCACTGATGG AGATCGGTCTGGGCGATCTCTACTCGGAAAGGGCGGTGCAGGGCGGCATGACCACGCGTAAGGCCGACCTGATTTTTGCA TCCCTGCCCTACCGGATCATGCATGAGTTTCAGATCCCGATTTACAACAGGATTCGTGAACAGGACGCAGATTTTTATAA GGCACTGGAAGAGGCCGGCTTCATGCTGGACTTCGGCGACGACGAGTCTGGCCTGTTCATGAAATATCTGCGACGTGGAT CGGGCTATTACATCGATGTCGGCGCCTGTGATCTGGTGATTGACGGCTCGATCAAGCTCAAATCCGGCGTGGACGTCTCG CATTTGACCGAAAACGCCGTCGTGCTGAAGGATGGTACCCAGTTGCCAGCGGATCTCGTGGTCTATGCCACCGGCTATGG CTCGATGAACGGCTGGGCGGCCGATCTCATTTCGCGCGACGTCGCTGACAAAATCGGCAAATGTTGGGGGCTCGGCTCCG ATACGACTAAGGACCCCGGTCCCTGGGAGGGCGAACAACGCAACATGTGGAAGCCGACGCAACAGGACGCACTGTGGTTC CACGGCGGCAACCTGCACCAGTCACGACACTATTCGCAATATCTGTCATTGCAGCTGAAAGCTCGTCAAGTCGGCATCGA TACGCCCGTCTACGGCATGACCAGACCGCATCATCTGTCGTAA
Upstream 100 bases:
>100_bases CTGTTGCGGGAGAGGAGACCGCGCAGGTGATGGCCGCTTCGAAAGGCGCCTGGAGGGGCGCTTCATCACCGATGACACAA GCACTACGGAGGAGAAGACC
Downstream 100 bases:
>100_bases AGCCCATAGGGGGCGCCAGCCTGGCTGGTGCCCCCTATGATTGGTCCTGTAAGGTCGTGATTTGCGGAAATGAAATAGAG ATCGGGTAGGGTGGCGATCG
Product: flavin-containing monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 600
Protein sequence:
>600_residues MLDISPATKIDTVLSKLGKALESGDIDAAVNLFQTDCYWRDLVTFTWNLKTLEGHEQIREMLKSQLGAITPSNFVQDPKE PATDAGGITDGWFEFETGVARGYGHIRLKDGRIWTLLTTMTELKGHEEPKGIRRPMGAEHGHDRNRMTWKEKRESESAEL GYSAQPYVVIIGGGQGGIALGARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYIPFPENWPVFTPKDKV GDWLEMYTKVMELNYWSSTTCKSAQFDEATGEWTVIVERAGKEIVLKPKQLVLATGMSGKANVPNFPGQDVFKGEQQHSS QHPGPDAYAGKRVVVIGSNNSAHDICAALWEAGADVTMLQRSSTHIVKSGSLMEIGLGDLYSERAVQGGMTTRKADLIFA SLPYRIMHEFQIPIYNRIREQDADFYKALEEAGFMLDFGDDESGLFMKYLRRGSGYYIDVGACDLVIDGSIKLKSGVDVS HLTENAVVLKDGTQLPADLVVYATGYGSMNGWAADLISRDVADKIGKCWGLGSDTTKDPGPWEGEQRNMWKPTQQDALWF HGGNLHQSRHYSQYLSLQLKARQVGIDTPVYGMTRPHHLS
Sequences:
>Translated_600_residues MLDISPATKIDTVLSKLGKALESGDIDAAVNLFQTDCYWRDLVTFTWNLKTLEGHEQIREMLKSQLGAITPSNFVQDPKE PATDAGGITDGWFEFETGVARGYGHIRLKDGRIWTLLTTMTELKGHEEPKGIRRPMGAEHGHDRNRMTWKEKRESESAEL GYSAQPYVVIIGGGQGGIALGARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYIPFPENWPVFTPKDKV GDWLEMYTKVMELNYWSSTTCKSAQFDEATGEWTVIVERAGKEIVLKPKQLVLATGMSGKANVPNFPGQDVFKGEQQHSS QHPGPDAYAGKRVVVIGSNNSAHDICAALWEAGADVTMLQRSSTHIVKSGSLMEIGLGDLYSERAVQGGMTTRKADLIFA SLPYRIMHEFQIPIYNRIREQDADFYKALEEAGFMLDFGDDESGLFMKYLRRGSGYYIDVGACDLVIDGSIKLKSGVDVS HLTENAVVLKDGTQLPADLVVYATGYGSMNGWAADLISRDVADKIGKCWGLGSDTTKDPGPWEGEQRNMWKPTQQDALWF HGGNLHQSRHYSQYLSLQLKARQVGIDTPVYGMTRPHHLS >Mature_600_residues MLDISPATKIDTVLSKLGKALESGDIDAAVNLFQTDCYWRDLVTFTWNLKTLEGHEQIREMLKSQLGAITPSNFVQDPKE PATDAGGITDGWFEFETGVARGYGHIRLKDGRIWTLLTTMTELKGHEEPKGIRRPMGAEHGHDRNRMTWKEKRESESAEL GYSAQPYVVIIGGGQGGIALGARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYIPFPENWPVFTPKDKV GDWLEMYTKVMELNYWSSTTCKSAQFDEATGEWTVIVERAGKEIVLKPKQLVLATGMSGKANVPNFPGQDVFKGEQQHSS QHPGPDAYAGKRVVVIGSNNSAHDICAALWEAGADVTMLQRSSTHIVKSGSLMEIGLGDLYSERAVQGGMTTRKADLIFA SLPYRIMHEFQIPIYNRIREQDADFYKALEEAGFMLDFGDDESGLFMKYLRRGSGYYIDVGACDLVIDGSIKLKSGVDVS HLTENAVVLKDGTQLPADLVVYATGYGSMNGWAADLISRDVADKIGKCWGLGSDTTKDPGPWEGEQRNMWKPTQQDALWF HGGNLHQSRHYSQYLSLQLKARQVGIDTPVYGMTRPHHLS
Specific function: Unknown
COG id: COG2072
COG function: function code P; Predicted flavoprotein involved in K+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503759, Length=358, Percent_Identity=24.8603351955307, Blast_Score=89, Evalue=1e-17, Organism=Homo sapiens, GI4503757, Length=361, Percent_Identity=26.3157894736842, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI4503755, Length=366, Percent_Identity=23.7704918032787, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI221316672, Length=358, Percent_Identity=25.6983240223464, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI221316674, Length=358, Percent_Identity=25.6983240223464, Blast_Score=81, Evalue=2e-15, Organism=Homo sapiens, GI221316678, Length=211, Percent_Identity=27.9620853080569, Blast_Score=75, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR000103 [H]
Pfam domain/function: PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 66981; Mature: 66981
Theoretical pI: Translated: 6.33; Mature: 6.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDISPATKIDTVLSKLGKALESGDIDAAVNLFQTDCYWRDLVTFTWNLKTLEGHEQIRE CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHH MLKSQLGAITPSNFVQDPKEPATDAGGITDGWFEFETGVARGYGHIRLKDGRIWTLLTTM HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCHHCCCCEEEEECCCEEEHHHHH TELKGHEEPKGIRRPMGAEHGHDRNRMTWKEKRESESAELGYSAQPYVVIIGGGQGGIAL HHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEECCCCCHHH GARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYIPFPENWPVFTPKDKV HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH GDWLEMYTKVMELNYWSSTTCKSAQFDEATGEWTVIVERAGKEIVLKPKQLVLATGMSGK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEEEECCCCC ANVPNFPGQDVFKGEQQHSSQHPGPDAYAGKRVVVIGSNNSAHDICAALWEAGADVTMLQ CCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEE RSSTHIVKSGSLMEIGLGDLYSERAVQGGMTTRKADLIFASLPYRIMHEFQIPIYNRIRE CCCCEEEECCCEEEECCCHHHHHHHHHCCCCCCHHHEEEECCCHHHHHHHCCCHHHHHHH QDADFYKALEEAGFMLDFGDDESGLFMKYLRRGSGYYIDVGACDLVIDGSIKLKSGVDVS CCHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCEEEECCEEEEECCCEEECCCCCHH HLTENAVVLKDGTQLPADLVVYATGYGSMNGWAADLISRDVADKIGKCWGLGSDTTKDPG HHCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PWEGEQRNMWKPTQQDALWFHGGNLHQSRHYSQYLSLQLKARQVGIDTPVYGMTRPHHLS CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEEEHEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLDISPATKIDTVLSKLGKALESGDIDAAVNLFQTDCYWRDLVTFTWNLKTLEGHEQIRE CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCEEEEEEEEEEEEECCHHHHHHH MLKSQLGAITPSNFVQDPKEPATDAGGITDGWFEFETGVARGYGHIRLKDGRIWTLLTTM HHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCEEEECCCHHCCCCEEEEECCCEEEHHHHH TELKGHEEPKGIRRPMGAEHGHDRNRMTWKEKRESESAELGYSAQPYVVIIGGGQGGIAL HHHCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHCCCHHHCCCCCCCEEEEEECCCCCHHH GARLRQLGVPTIIIEKNERPGDSWRKRYKSLCLHDPVWYDHLPYIPFPENWPVFTPKDKV HHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHH GDWLEMYTKVMELNYWSSTTCKSAQFDEATGEWTVIVERAGKEIVLKPKQLVLATGMSGK HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCEEEEEECCCCC ANVPNFPGQDVFKGEQQHSSQHPGPDAYAGKRVVVIGSNNSAHDICAALWEAGADVTMLQ CCCCCCCCCHHHCCCHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCCEEEEE RSSTHIVKSGSLMEIGLGDLYSERAVQGGMTTRKADLIFASLPYRIMHEFQIPIYNRIRE CCCCEEEECCCEEEECCCHHHHHHHHHCCCCCCHHHEEEECCCHHHHHHHCCCHHHHHHH QDADFYKALEEAGFMLDFGDDESGLFMKYLRRGSGYYIDVGACDLVIDGSIKLKSGVDVS CCHHHHHHHHHCCCEEEECCCCCHHHHHHHHCCCCCEEEECCEEEEECCCEEECCCCCHH HLTENAVVLKDGTQLPADLVVYATGYGSMNGWAADLISRDVADKIGKCWGLGSDTTKDPG HHCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PWEGEQRNMWKPTQQDALWFHGGNLHQSRHYSQYLSLQLKARQVGIDTPVYGMTRPHHLS CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHEEEEEHEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA