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The map label for this gene is 222102898

Identifier: 222102898

GI number: 222102898

Start: 580634

End: 582223

Strand: Direct

Name: 222102898

Synonym: Avi_7646

Alternate gene names: NA

Gene position: 580634-582223 (Clockwise)

Preceding gene: 222102897

Following gene: 222102899

Centisome position: 91.91

GC content: 54.91

Gene sequence:

>1590_bases
ATGTTGTCATTAAACATCTTTGGCCGCTTTCTGATTGTCGACTCTCATGGGTGCGACCGCAGCCCGAGAGGATCGAAGGC
GCGCGGGATAGTAGCGTTACTTGCCATGTCACAAGGCTACTCCCGCAACCGGACTTGGTTGCAGGATAAGCTGTGGAGCG
ATCGAGATTCCAAGAGGGGGTCGGACAGCCTTCGCCAAACGCTCGTCGACATACGACGGGCGTTTGGCCCCTATCAAACG
ATATTGAAAGCGGATCGGGAAAAGGTAGCACTTGATCCAACCCGCTTTTCGATAAAATACCGGCTCATGCCCGCCTCGAA
TGACTGGAATAATGAGCAGGACGCATTTGCCGACCTCGACATTCGTGACCCTGAGTTTGAAGACTGGATCCGGAACTTAC
GAGCCTCTCTTGCGGACAAGGCGCGGATCAGTCCGCCCCATGCCCTACGCAGTCATACCGCCCCCAAACCCGCAATTTTT
TTCCAATTCCTATCCGACAACCAACCTTCGAGTGAATTGACGTCAAGTCGACTGATGACACTGACAACGACGTCGCTCCG
CGATTTAGACGATTTTGAAATCTTTCCCCGTCACGCTGCCATCGGCGGCACTCTCCCTCCCTTGCCTGTCAAGGGCCTCA
CTGTCGCAGTGCGGACCGTAACTTTAGGTCGAGACAGCCATGTGGCTATTGCCCTCAGCCATGCAGGGACTGGACAGCTC
TATTGGTCGCGAACCACTCAAATATCGGCATCACACACAGAGTTGCTGCATCACGAATCCGGGATTCTTGTCCAAGCCAT
TCTTTCAACGTTGCGCGAGCGGAAGGATCAGCTTGGAATCTCACATTCGGGAGCCATGCTCGCCAATCATGCGCGGGCCT
TGATCTTCCGATTTGATCGGCAAAGTTTAAGAGATGCAGACGTCAATCTGCGCTATGCCTATGATCGCGATCCGCGCCCG
CAATATCTGGCATGGCGGGCATTCCTGCGCAACATGGCACAGTTCCAGCATTGCAGCAGCGCATTCCTGGACGACAAGAT
CACATCGACGGAACTGGTACAGGAAGCGCTGCGCGAGGACGCTGGTAGCGCCAGCATCCTGGGCATCGGGGCCCATCTCG
AATATCTTGGAGGCGGTTCAAGCCGTGGTTCACTGCGGCTTGCTGAACGCGCTGTCAGCCTTGACCCGCTGAACGCAGTC
AATCTGGCGATTTTATCCAATACGGAACTGGTTCTCGACAAGCTTAGGGATAGTCAAGGATCGGCTTTAAGCGCACTTGC
ATTAACAGGCGGAGGAGAGCACAGGGCCTTTGTCGAATTCTTTTGCTGTATGTCCGCCGCCGCGTTGGGCGAATATGCAA
CGGCCATAGGTCACGCAGAAGCAGCGCTTATTCTGCGTCCCGCATTTCGTGCGCCCCTCAGGTATTTGATTGCACTTTAC
AAGCAGGCGGGCATGATCGAGCAAATGGATCGAGCCGTCTCCCGGTTGCAACAATTCGAGCCTGACTTCCTGCCTGCACG
CTTTCTCGACAGCGATTATCCGGTCACAACCATGCGACGGATTCGGTTGATTGACGCCATCGCCAGTTAG

Upstream 100 bases:

>100_bases
TCCTGGCGCTGAAAAACTTGAACTCGATCCAACCGGCAAGCTTTTCCTTCGCTGATATGATATGATACTTTAAATATATT
CCGTCTCCAGGGGGCTGCAC

Downstream 100 bases:

>100_bases
TTATCCAAGCGCTTCAAACTCACGGACGATTCACGCTGGACTCACGATAGCAGACTATCGTCGCGTTATAGAAACACGTA
GGAACAACTATGAGTAATAA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Transcriptional Regulator Sarp Family; TPR Repeat-Containing Protein

Number of amino acids: Translated: 529; Mature: 529

Protein sequence:

>529_residues
MLSLNIFGRFLIVDSHGCDRSPRGSKARGIVALLAMSQGYSRNRTWLQDKLWSDRDSKRGSDSLRQTLVDIRRAFGPYQT
ILKADREKVALDPTRFSIKYRLMPASNDWNNEQDAFADLDIRDPEFEDWIRNLRASLADKARISPPHALRSHTAPKPAIF
FQFLSDNQPSSELTSSRLMTLTTTSLRDLDDFEIFPRHAAIGGTLPPLPVKGLTVAVRTVTLGRDSHVAIALSHAGTGQL
YWSRTTQISASHTELLHHESGILVQAILSTLRERKDQLGISHSGAMLANHARALIFRFDRQSLRDADVNLRYAYDRDPRP
QYLAWRAFLRNMAQFQHCSSAFLDDKITSTELVQEALREDAGSASILGIGAHLEYLGGGSSRGSLRLAERAVSLDPLNAV
NLAILSNTELVLDKLRDSQGSALSALALTGGGEHRAFVEFFCCMSAAALGEYATAIGHAEAALILRPAFRAPLRYLIALY
KQAGMIEQMDRAVSRLQQFEPDFLPARFLDSDYPVTTMRRIRLIDAIAS

Sequences:

>Translated_529_residues
MLSLNIFGRFLIVDSHGCDRSPRGSKARGIVALLAMSQGYSRNRTWLQDKLWSDRDSKRGSDSLRQTLVDIRRAFGPYQT
ILKADREKVALDPTRFSIKYRLMPASNDWNNEQDAFADLDIRDPEFEDWIRNLRASLADKARISPPHALRSHTAPKPAIF
FQFLSDNQPSSELTSSRLMTLTTTSLRDLDDFEIFPRHAAIGGTLPPLPVKGLTVAVRTVTLGRDSHVAIALSHAGTGQL
YWSRTTQISASHTELLHHESGILVQAILSTLRERKDQLGISHSGAMLANHARALIFRFDRQSLRDADVNLRYAYDRDPRP
QYLAWRAFLRNMAQFQHCSSAFLDDKITSTELVQEALREDAGSASILGIGAHLEYLGGGSSRGSLRLAERAVSLDPLNAV
NLAILSNTELVLDKLRDSQGSALSALALTGGGEHRAFVEFFCCMSAAALGEYATAIGHAEAALILRPAFRAPLRYLIALY
KQAGMIEQMDRAVSRLQQFEPDFLPARFLDSDYPVTTMRRIRLIDAIAS
>Mature_529_residues
MLSLNIFGRFLIVDSHGCDRSPRGSKARGIVALLAMSQGYSRNRTWLQDKLWSDRDSKRGSDSLRQTLVDIRRAFGPYQT
ILKADREKVALDPTRFSIKYRLMPASNDWNNEQDAFADLDIRDPEFEDWIRNLRASLADKARISPPHALRSHTAPKPAIF
FQFLSDNQPSSELTSSRLMTLTTTSLRDLDDFEIFPRHAAIGGTLPPLPVKGLTVAVRTVTLGRDSHVAIALSHAGTGQL
YWSRTTQISASHTELLHHESGILVQAILSTLRERKDQLGISHSGAMLANHARALIFRFDRQSLRDADVNLRYAYDRDPRP
QYLAWRAFLRNMAQFQHCSSAFLDDKITSTELVQEALREDAGSASILGIGAHLEYLGGGSSRGSLRLAERAVSLDPLNAV
NLAILSNTELVLDKLRDSQGSALSALALTGGGEHRAFVEFFCCMSAAALGEYATAIGHAEAALILRPAFRAPLRYLIALY
KQAGMIEQMDRAVSRLQQFEPDFLPARFLDSDYPVTTMRRIRLIDAIAS

Specific function: Unknown

COG id: COG3629

COG function: function code T; DNA-binding transcriptional activator of the SARP family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58905; Mature: 58905

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLNIFGRFLIVDSHGCDRSPRGSKARGIVALLAMSQGYSRNRTWLQDKLWSDRDSKRG
CEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHEEHHHCCCCCCCCHHHHHHCCCCCCCCC
SDSLRQTLVDIRRAFGPYQTILKADREKVALDPTRFSIKYRLMPASNDWNNEQDAFADLD
HHHHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCEECCC
IRDPEFEDWIRNLRASLADKARISPPHALRSHTAPKPAIFFQFLSDNQPSSELTSSRLMT
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHEEEEECCCCCCHHHHHHHHEEE
LTTTSLRDLDDFEIFPRHAAIGGTLPPLPVKGLTVAVRTVTLGRDSHVAIALSHAGTGQL
EEECHHCCCCCCHHCCCHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCE
YWSRTTQISASHTELLHHESGILVQAILSTLRERKDQLGISHSGAMLANHARALIFRFDR
EEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCH
QSLRDADVNLRYAYDRDPRPQYLAWRAFLRNMAQFQHCSSAFLDDKITSTELVQEALRED
HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
AGSASILGIGAHLEYLGGGSSRGSLRLAERAVSLDPLNAVNLAILSNTELVLDKLRDSQG
CCCCEEEEECCEEHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCC
SALSALALTGGGEHRAFVEFFCCMSAAALGEYATAIGHAEAALILRPAFRAPLRYLIALY
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHHHHHHHHHHHHH
KQAGMIEQMDRAVSRLQQFEPDFLPARFLDSDYPVTTMRRIRLIDAIAS
HHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLSLNIFGRFLIVDSHGCDRSPRGSKARGIVALLAMSQGYSRNRTWLQDKLWSDRDSKRG
CEEEEEEEEEEEEECCCCCCCCCCCCHHHHHHEEHHHCCCCCCCCHHHHHHCCCCCCCCC
SDSLRQTLVDIRRAFGPYQTILKADREKVALDPTRFSIKYRLMPASNDWNNEQDAFADLD
HHHHHHHHHHHHHHHCHHHHHHHCCCCCEEECCCEEEEEEEEEECCCCCCCCCCCEECCC
IRDPEFEDWIRNLRASLADKARISPPHALRSHTAPKPAIFFQFLSDNQPSSELTSSRLMT
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHEEEEECCCCCCHHHHHHHHEEE
LTTTSLRDLDDFEIFPRHAAIGGTLPPLPVKGLTVAVRTVTLGRDSHVAIALSHAGTGQL
EEECHHCCCCCCHHCCCHHCCCCCCCCCCCCCEEEEEEEEEECCCCEEEEEEECCCCCCE
YWSRTTQISASHTELLHHESGILVQAILSTLRERKDQLGISHSGAMLANHARALIFRFDR
EEECCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCH
QSLRDADVNLRYAYDRDPRPQYLAWRAFLRNMAQFQHCSSAFLDDKITSTELVQEALRED
HHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
AGSASILGIGAHLEYLGGGSSRGSLRLAERAVSLDPLNAVNLAILSNTELVLDKLRDSQG
CCCCEEEEECCEEHCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHCCCC
SALSALALTGGGEHRAFVEFFCCMSAAALGEYATAIGHAEAALILRPAFRAPLRYLIALY
CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEEECHHHHHHHHHHHHHH
KQAGMIEQMDRAVSRLQQFEPDFLPARFLDSDYPVTTMRRIRLIDAIAS
HHCCHHHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA