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The map label for this gene is yhhG [C]

Identifier: 222102874

GI number: 222102874

Start: 552863

End: 553261

Strand: Reverse

Name: yhhG [C]

Synonym: Avi_7612

Alternate gene names: 222102874

Gene position: 553261-552863 (Counterclockwise)

Preceding gene: 222102888

Following gene: 222102869

Centisome position: 87.57

GC content: 54.64

Gene sequence:

>399_bases
ATGCAGCGCATTACCATCACCATTGACGACGACCTCATGACTGAGCTGGACCGAATGATCGAGGCAAAAGGCTATCAGAA
CCGCTCCGAAGCCTTGCGCGATCTGGCGCGGGCCGGGTTGAAACAGGCCTCAATCGAGGAGGGGCATATTGCGAATTGCG
CCGGTGTTTTGAGCTATGTGTATGACCATGAAGCGAGAGATCTCGCCAGCCGCCTGACCACGACCTTTCATGATCACCAT
GATCTTTCTGTGGCCAGCATGCATGTGCATCTGGATCAGCACCGCTGTCTTGAGATCAGCGTTTTGCGCGGCAAAACCGA
AGAGGTGCGCCACTTTGCCGATCATGTGATGGCAGAGCGCTCCGTCACCTATGGTGAGCTGAAAATTATCCCGGCATAA

Upstream 100 bases:

>100_bases
TCATACTGTCATTGTCAGGTCAACCGTCTATCGGGACAAAGGCTGGAAGCGGATAAAAAAGGTGATACACCATACATCAG
CATCAACGTCGGGAACAATC

Downstream 100 bases:

>100_bases
GCATCGAATAGGGACAAGGCCGAGCCGGTGTTGTCACATTAAGCTTTTCAGGCCGAGAAGTCCCGAAGCGATGGTCGTCC
AGTTCTCCGCTCCCGCATCG

Product: nickel responsive regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MQRITITIDDDLMTELDRMIEAKGYQNRSEALRDLARAGLKQASIEEGHIANCAGVLSYVYDHEARDLASRLTTTFHDHH
DLSVASMHVHLDQHRCLEISVLRGKTEEVRHFADHVMAERSVTYGELKIIPA

Sequences:

>Translated_132_residues
MQRITITIDDDLMTELDRMIEAKGYQNRSEALRDLARAGLKQASIEEGHIANCAGVLSYVYDHEARDLASRLTTTFHDHH
DLSVASMHVHLDQHRCLEISVLRGKTEEVRHFADHVMAERSVTYGELKIIPA
>Mature_132_residues
MQRITITIDDDLMTELDRMIEAKGYQNRSEALRDLARAGLKQASIEEGHIANCAGVLSYVYDHEARDLASRLTTTFHDHH
DLSVASMHVHLDQHRCLEISVLRGKTEEVRHFADHVMAERSVTYGELKIIPA

Specific function: Transcriptional regulator (Potential) [H]

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

Organism=Escherichia coli, GI1789892, Length=131, Percent_Identity=53.4351145038168, Blast_Score=126, Evalue=4e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR022988
- InterPro:   IPR014160
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 15008; Mature: 15008

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRITITIDDDLMTELDRMIEAKGYQNRSEALRDLARAGLKQASIEEGHIANCAGVLSYV
CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
YDHEARDLASRLTTTFHDHHDLSVASMHVHLDQHRCLEISVLRGKTEEVRHFADHVMAER
HHHHHHHHHHHHHHHHCCCCCCEEEHEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHC
SVTYGELKIIPA
CCCCCEEEEECC
>Mature Secondary Structure
MQRITITIDDDLMTELDRMIEAKGYQNRSEALRDLARAGLKQASIEEGHIANCAGVLSYV
CCEEEEEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
YDHEARDLASRLTTTFHDHHDLSVASMHVHLDQHRCLEISVLRGKTEEVRHFADHVMAER
HHHHHHHHHHHHHHHHCCCCCCEEEHEEEEECCCCEEEEEEECCCHHHHHHHHHHHHHHC
SVTYGELKIIPA
CCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA