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The map label for this gene is yurN [H]

Identifier: 222102860

GI number: 222102860

Start: 537439

End: 538359

Strand: Reverse

Name: yurN [H]

Synonym: Avi_7592

Alternate gene names: 222102860

Gene position: 538359-537439 (Counterclockwise)

Preceding gene: 222102861

Following gene: 222102859

Centisome position: 85.21

GC content: 56.35

Gene sequence:

>921_bases
ATGACGTCTCTGTCTGAGCTGCACTCCCAATCGTCTGCAGCCGCCTCGAAGCGCTTCAGTTATGCCGCCATTGCGCATCT
CTTCGCGGCCCCGGCCTTCCTGCTGCTAATCGCAACGGTGGTTGCGCCGATCTTCGTTGTGGTCCTGATCAGCTTGACCG
ATTATCGCCTCGGTCGGCTCACCTTGAATTTTGTCGGCCTCGGCAACTATGTCAGAATGATCAATGACCCGTTCTTCTGG
GCGGCCCTGCGCAACAGCGCACTCTATACGGCAATTGTCGTGCCGGTATCGGTGTTCGGTGCGCTGTGCGTTGCCGTGCT
GCTTGATGGTCGCCGTCGCTCGCGACGTTTCTACGAGATCGTCTATTTTCTGCCGGTCACCTCCACATTGACGGCCATGT
CCATTGTCTGGAGCTATCTGCTCAATGGCCATATCGGGCCGCTGGCAAGCCTGTTGGACGCATTGGGCTTACCGGCTCTC
GATTTTTTTGCCGATGGAACACTTGCGTTGATCGGCCTTGCCATCATCGGCATCTGGCATCTGTTTGGCTTCAATCTGAT
CCTGTTTCTGGCGGGGCTCACGGTCCTATCGGCCGAGCTGAAGGAGGCGTCTGCTCTGGATGGAATGGACGGCTTTTGCG
ACCGGCTGCGTTACCTGACCTGGCCGCTTCTGGCTCCTACGACCATCGTGGTTGTCGTGTTGAGCTGCATACAGTCATTT
CAGGTCTTCGACACGGTGGCGGTTCTGACCAATGGTGGCCCCTATGGCGCGACTGAAATGCTGCTGCACAAGATCAACAC
GGATACGTTCACAGGCCTGAAAGCCGGTTATGGCAGCGCGCTAACTGTCGTCTATCTCCTGTTGATCGGGACATTTTCAA
TCGTCCACGTCGGCTTAAGCAACAGAAAGGCGCATTTTTGA

Upstream 100 bases:

>100_bases
GCGCTGCAGATCGCCTCCGATGCTGCGCTCATCTTTGATCAAAGCGGTCGCCGTGTTCCAGTGTCGCTTCCTTTGGCAGC
TCCGGTCGAGGAGGCATGTT

Downstream 100 bases:

>100_bases
TGGTCCGCTCTCCGCTTCGCGCAATGCTGTCGCATGCCGTTCTGCTGGGCGGTGCCTTTCTGATGGTCTATCCGTTCTTT
TGGATGTGGCGTGCGTCAAC

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTSLSELHSQSSAAASKRFSYAAIAHLFAAPAFLLLIATVVAPIFVVVLISLTDYRLGRLTLNFVGLGNYVRMINDPFFW
AALRNSALYTAIVVPVSVFGALCVAVLLDGRRRSRRFYEIVYFLPVTSTLTAMSIVWSYLLNGHIGPLASLLDALGLPAL
DFFADGTLALIGLAIIGIWHLFGFNLILFLAGLTVLSAELKEASALDGMDGFCDRLRYLTWPLLAPTTIVVVVLSCIQSF
QVFDTVAVLTNGGPYGATEMLLHKINTDTFTGLKAGYGSALTVVYLLLIGTFSIVHVGLSNRKAHF

Sequences:

>Translated_306_residues
MTSLSELHSQSSAAASKRFSYAAIAHLFAAPAFLLLIATVVAPIFVVVLISLTDYRLGRLTLNFVGLGNYVRMINDPFFW
AALRNSALYTAIVVPVSVFGALCVAVLLDGRRRSRRFYEIVYFLPVTSTLTAMSIVWSYLLNGHIGPLASLLDALGLPAL
DFFADGTLALIGLAIIGIWHLFGFNLILFLAGLTVLSAELKEASALDGMDGFCDRLRYLTWPLLAPTTIVVVVLSCIQSF
QVFDTVAVLTNGGPYGATEMLLHKINTDTFTGLKAGYGSALTVVYLLLIGTFSIVHVGLSNRKAHF
>Mature_305_residues
TSLSELHSQSSAAASKRFSYAAIAHLFAAPAFLLLIATVVAPIFVVVLISLTDYRLGRLTLNFVGLGNYVRMINDPFFWA
ALRNSALYTAIVVPVSVFGALCVAVLLDGRRRSRRFYEIVYFLPVTSTLTAMSIVWSYLLNGHIGPLASLLDALGLPALD
FFADGTLALIGLAIIGIWHLFGFNLILFLAGLTVLSAELKEASALDGMDGFCDRLRYLTWPLLAPTTIVVVVLSCIQSFQ
VFDTVAVLTNGGPYGATEMLLHKINTDTFTGLKAGYGSALTVVYLLLIGTFSIVHVGLSNRKAHF

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=290, Percent_Identity=26.551724137931, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1787570, Length=205, Percent_Identity=30.7317073170732, Blast_Score=86, Evalue=4e-18,
Organism=Escherichia coli, GI1790465, Length=256, Percent_Identity=25.78125, Blast_Score=61, Evalue=1e-10,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33117; Mature: 32986

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSLSELHSQSSAAASKRFSYAAIAHLFAAPAFLLLIATVVAPIFVVVLISLTDYRLGRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE
TLNFVGLGNYVRMINDPFFWAALRNSALYTAIVVPVSVFGALCVAVLLDGRRRSRRFYEI
EEEEEEHHHHHHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
VYFLPVTSTLTAMSIVWSYLLNGHIGPLASLLDALGLPALDFFADGTLALIGLAIIGIWH
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHH
LFGFNLILFLAGLTVLSAELKEASALDGMDGFCDRLRYLTWPLLAPTTIVVVVLSCIQSF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QVFDTVAVLTNGGPYGATEMLLHKINTDTFTGLKAGYGSALTVVYLLLIGTFSIVHVGLS
HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
NRKAHF
CCCCCC
>Mature Secondary Structure 
TSLSELHSQSSAAASKRFSYAAIAHLFAAPAFLLLIATVVAPIFVVVLISLTDYRLGRL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE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CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]