Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102739

Identifier: 222102739

GI number: 222102739

Start: 393334

End: 393894

Strand: Direct

Name: 222102739

Synonym: Avi_7422

Alternate gene names: NA

Gene position: 393334-393894 (Clockwise)

Preceding gene: 222102738

Following gene: 222102740

Centisome position: 62.26

GC content: 58.11

Gene sequence:

>561_bases
ATGGGACGCATAAAATATTTGCGAATGGAGGATCTCCAGCCCGAGCATCGCAACATCCCGCGCATGACGTCGAATATTAC
GCGGGCGGTTGCGCATAGTCCTGTTCTGGCGAATCTTGTTGCAGCAAGGGGAATGTATTTCCGCCATCAAAGCGGGTTGA
ACCCACGCCTGCGCGAACTGGCAATCTTGCAAGTCGGCTACAGCACCCGCTCTGCCTATGAATGGGCGCATCACATCGAT
GTGGCGCTGTCCTTTGGGGTGAGCCGGGATGATATCCGGGCGATCGGCGTGGAGAGCGAAGGTGGCGAGACCCATCTGGA
GCCGCTGGCGCGGGTCGTGCTGGCGGCAACAAGAGAGCTCACAGATCACATCACGCTCTCCGGGGAGCGTTTCGATCAAC
TCGCGCAAGCCCTCAGCAGCGAGCACCTTGTGGATCTGCTGGTCACCATCGGCGAATATATCGGTCTCGTTCGCGTCATG
GCGGCCATCGAGATTGATCTGGAGCCAGAATATATCCCGTTCCTGCAGGAGTTTCCACTCCCCGGGACGGGAAGACTTTG
A

Upstream 100 bases:

>100_bases
CAGCCAGACCTCATCGCATTCGCATCGGCCGGTTATGATCCAGCTTCGATTGTTGGAGAGGCACTGGGCGAGGCAAAACG
AAGCTTGGGGGCATAAGGCG

Downstream 100 bases:

>100_bases
TTGCCGGTCAACGGTGAATGCTCAATCCCAGAACCGGTACAAACAGGAGTGCTTAAGACATGAAACTACTGAGTTTTGAA
ATCCAGAACCGTAAAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Carboxymuconolactone Decarboxylase Protein; Carboxymuconolactone Decarboxylase Family

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MGRIKYLRMEDLQPEHRNIPRMTSNITRAVAHSPVLANLVAARGMYFRHQSGLNPRLRELAILQVGYSTRSAYEWAHHID
VALSFGVSRDDIRAIGVESEGGETHLEPLARVVLAATRELTDHITLSGERFDQLAQALSSEHLVDLLVTIGEYIGLVRVM
AAIEIDLEPEYIPFLQEFPLPGTGRL

Sequences:

>Translated_186_residues
MGRIKYLRMEDLQPEHRNIPRMTSNITRAVAHSPVLANLVAARGMYFRHQSGLNPRLRELAILQVGYSTRSAYEWAHHID
VALSFGVSRDDIRAIGVESEGGETHLEPLARVVLAATRELTDHITLSGERFDQLAQALSSEHLVDLLVTIGEYIGLVRVM
AAIEIDLEPEYIPFLQEFPLPGTGRL
>Mature_185_residues
GRIKYLRMEDLQPEHRNIPRMTSNITRAVAHSPVLANLVAARGMYFRHQSGLNPRLRELAILQVGYSTRSAYEWAHHIDV
ALSFGVSRDDIRAIGVESEGGETHLEPLARVVLAATRELTDHITLSGERFDQLAQALSSEHLVDLLVTIGEYIGLVRVMA
AIEIDLEPEYIPFLQEFPLPGTGRL

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20835; Mature: 20704

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRIKYLRMEDLQPEHRNIPRMTSNITRAVAHSPVLANLVAARGMYFRHQSGLNPRLREL
CCCCEEEECCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
AILQVGYSTRSAYEWAHHIDVALSFGVSRDDIRAIGVESEGGETHLEPLARVVLAATREL
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHH
TDHITLSGERFDQLAQALSSEHLVDLLVTIGEYIGLVRVMAAIEIDLEPEYIPFLQEFPL
HHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
PGTGRL
CCCCCC
>Mature Secondary Structure 
GRIKYLRMEDLQPEHRNIPRMTSNITRAVAHSPVLANLVAARGMYFRHQSGLNPRLREL
CCCEEEECCCCCCHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHH
AILQVGYSTRSAYEWAHHIDVALSFGVSRDDIRAIGVESEGGETHLEPLARVVLAATREL
HHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHEEECCCCCCCCHHHHHHHHHHHHHHHHH
TDHITLSGERFDQLAQALSSEHLVDLLVTIGEYIGLVRVMAAIEIDLEPEYIPFLQEFPL
HHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCC
PGTGRL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA