Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102725

Identifier: 222102725

GI number: 222102725

Start: 376370

End: 377011

Strand: Direct

Name: 222102725

Synonym: Avi_7403

Alternate gene names: NA

Gene position: 376370-377011 (Clockwise)

Preceding gene: 222102724

Following gene: 222102726

Centisome position: 59.57

GC content: 54.67

Gene sequence:

>642_bases
ATGACCAAAACACTTGGATTTCTTGGGGCAGGTCGCCTCGCACAGATGCTCGCACCAAAAGCGATAGCCGGTGGCTGGCG
GGTTATTCTTTCGAACTCGCGTGGACCTGAAACATTGGCTGATTTGGTCTCTCAACTCGGACCAAATGCCAGCGCAGCCA
CCAGCAAAGACATGGTGTTGGCCGCCGACATTATTATCCTTGCAATCCGGTGGCCACAAATCGCCGATGCCACAGCTGGT
CTGCCCTGGGACGGCAAAACCGTGATTGATGCCACCAACAATCGTCTCGGCCCGAAGCCTGAAGATGTCATCGTCATCGG
CGATGCAATCGCCAGTGAACTCGTCGCAGGTTATCTACCCGGTGCAAAGCTGGTCAAGGCTTTCAATCATGAGCCGATCC
CTGTGTTCGACAAAACACTTCCTCCCGCCGGGGATGAAAGCGTGCTTTTTCTGGCTGGCGCAGATGCGGAGGCAAAGAAG
CAAGTCGCGCAATTGATGCGGGATCTGAAGGCAACACCGATTGATCTTGGCGCGATTGACGAAGGCGGCTTGCTCATTGC
CATGGGTGGCCCGCTGACGAACAAGTTCAAACTATACACACCCGCTGAAGCCGAAGCTGAAACAAAAGCTGCGCTTGTCT
AA

Upstream 100 bases:

>100_bases
TGCCTCACAGTCTAGCCCTTGCTTGATTGCATCAATATGGCCCGCCCACGAGGGGTTTCCTTCGTGGGCGGCCCCTATTG
GCTCAGAGGAAGGACAAAGC

Downstream 100 bases:

>100_bases
TACGAAGACACGGAGAACATGACTGTTCGTATTCTATTTTCGAATATCTCAATCATCTGATGCATTTGAGATATTCGGAA
TTTTGCAAGACGAGGATGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Oxidoreductase; 2-Dehydropantoate 2-Reductase; Myo-Inositol 2-Dehydrogenase Protein; Polyketide Synthase

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTKTLGFLGAGRLAQMLAPKAIAGGWRVILSNSRGPETLADLVSQLGPNASAATSKDMVLAADIIILAIRWPQIADATAG
LPWDGKTVIDATNNRLGPKPEDVIVIGDAIASELVAGYLPGAKLVKAFNHEPIPVFDKTLPPAGDESVLFLAGADAEAKK
QVAQLMRDLKATPIDLGAIDEGGLLIAMGGPLTNKFKLYTPAEAEAETKAALV

Sequences:

>Translated_213_residues
MTKTLGFLGAGRLAQMLAPKAIAGGWRVILSNSRGPETLADLVSQLGPNASAATSKDMVLAADIIILAIRWPQIADATAG
LPWDGKTVIDATNNRLGPKPEDVIVIGDAIASELVAGYLPGAKLVKAFNHEPIPVFDKTLPPAGDESVLFLAGADAEAKK
QVAQLMRDLKATPIDLGAIDEGGLLIAMGGPLTNKFKLYTPAEAEAETKAALV
>Mature_212_residues
TKTLGFLGAGRLAQMLAPKAIAGGWRVILSNSRGPETLADLVSQLGPNASAATSKDMVLAADIIILAIRWPQIADATAGL
PWDGKTVIDATNNRLGPKPEDVIVIGDAIASELVAGYLPGAKLVKAFNHEPIPVFDKTLPPAGDESVLFLAGADAEAKKQ
VAQLMRDLKATPIDLGAIDEGGLLIAMGGPLTNKFKLYTPAEAEAETKAALV

Specific function: Unknown

COG id: COG2085

COG function: function code R; Predicted dinucleotide-binding enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22129; Mature: 21998

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKTLGFLGAGRLAQMLAPKAIAGGWRVILSNSRGPETLADLVSQLGPNASAATSKDMVL
CCCCCCCCCHHHHHHHHCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEE
AADIIILAIRWPQIADATAGLPWDGKTVIDATNNRLGPKPEDVIVIGDAIASELVAGYLP
EEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHCC
GAKLVKAFNHEPIPVFDKTLPPAGDESVLFLAGADAEAKKQVAQLMRDLKATPIDLGAID
HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
EGGLLIAMGGPLTNKFKLYTPAEAEAETKAALV
CCCEEEEECCCCCCCEEEECCCCCCCCHHHCCC
>Mature Secondary Structure 
TKTLGFLGAGRLAQMLAPKAIAGGWRVILSNSRGPETLADLVSQLGPNASAATSKDMVL
CCCCCCCCHHHHHHHHCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEE
AADIIILAIRWPQIADATAGLPWDGKTVIDATNNRLGPKPEDVIVIGDAIASELVAGYLP
EEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECHHHHHHHHHHHCC
GAKLVKAFNHEPIPVFDKTLPPAGDESVLFLAGADAEAKKQVAQLMRDLKATPIDLGAID
HHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCC
EGGLLIAMGGPLTNKFKLYTPAEAEAETKAALV
CCCEEEEECCCCCCCEEEECCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA