Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102706

Identifier: 222102706

GI number: 222102706

Start: 356152

End: 356562

Strand: Direct

Name: 222102706

Synonym: Avi_7380

Alternate gene names: NA

Gene position: 356152-356562 (Clockwise)

Preceding gene: 222102705

Following gene: 222102709

Centisome position: 56.37

GC content: 54.01

Gene sequence:

>411_bases
ATGAAAGTTACGATCATTGCCGCAGCCTTGCTTTTTAACGCCACGGCACTTGCGCAAGCGGCATCGTGCGAGAATAATTT
CAAAGTGAGCGGCGTCCCCATGGTCACCGCATTAAGCTATCGCTCGTGGCAGGAATACCCCAAAGCCAATTCCGCGGTTG
TTCTGAAAAAGCTGGCTCAGGCCGTGGCGGCGGAAGGCTTTTCCGGCATAAAGGTCAACAAGGAATTGTCGTCTATTGAC
GCTTTCCAGGAAACCAGTGGGAGTGGCCGGATTCAGACCCTGCGGGTTGTCGCGCGTCAGAAAGGGGCAGGCGTCAGGGT
CGATGCTGTCTTTGATATCCAGCCCGGTCAACTCACCAGCAAGGACGTTGTGCGTACAGGCATCTGCAAAATTATCGATT
CAGCCATCTGA

Upstream 100 bases:

>100_bases
TTGCGTTGATTGCATGCCTAACTGGGGGCATTAACGGCCTTTCTTCAATATCAAAACGAATATGCGTTAGGTCGATTATG
GTCCGCCGCGAGGAGGAAAA

Downstream 100 bases:

>100_bases
CGGCTATCACAGTTGCTCAGATATCTTGACGTTCATGCTGTCTGCCGTTTTGACGACTGCCCCCATAAGGGGGCAGCAGC
TTCGCTGATCTCGTCGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKVTIIAAALLFNATALAQAASCENNFKVSGVPMVTALSYRSWQEYPKANSAVVLKKLAQAVAAEGFSGIKVNKELSSID
AFQETSGSGRIQTLRVVARQKGAGVRVDAVFDIQPGQLTSKDVVRTGICKIIDSAI

Sequences:

>Translated_136_residues
MKVTIIAAALLFNATALAQAASCENNFKVSGVPMVTALSYRSWQEYPKANSAVVLKKLAQAVAAEGFSGIKVNKELSSID
AFQETSGSGRIQTLRVVARQKGAGVRVDAVFDIQPGQLTSKDVVRTGICKIIDSAI
>Mature_136_residues
MKVTIIAAALLFNATALAQAASCENNFKVSGVPMVTALSYRSWQEYPKANSAVVLKKLAQAVAAEGFSGIKVNKELSSID
AFQETSGSGRIQTLRVVARQKGAGVRVDAVFDIQPGQLTSKDVVRTGICKIIDSAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14387; Mature: 14387

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVTIIAAALLFNATALAQAASCENNFKVSGVPMVTALSYRSWQEYPKANSAVVLKKLAQ
CEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
AVAAEGFSGIKVNKELSSIDAFQETSGSGRIQTLRVVARQKGAGVRVDAVFDIQPGQLTS
HHHHCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCH
KDVVRTGICKIIDSAI
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVTIIAAALLFNATALAQAASCENNFKVSGVPMVTALSYRSWQEYPKANSAVVLKKLAQ
CEEHHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHH
AVAAEGFSGIKVNKELSSIDAFQETSGSGRIQTLRVVARQKGAGVRVDAVFDIQPGQLTS
HHHHCCCCCEEECCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCH
KDVVRTGICKIIDSAI
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA