Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102675

Identifier: 222102675

GI number: 222102675

Start: 322509

End: 323219

Strand: Reverse

Name: 222102675

Synonym: Avi_7342

Alternate gene names: NA

Gene position: 323219-322509 (Counterclockwise)

Preceding gene: 222102676

Following gene: 222102674

Centisome position: 51.16

GC content: 59.21

Gene sequence:

>711_bases
ATGCAATGGTTGGAGGCCATCTGGACGAAAGAAGGAAAGGGCATCGCCAAGGATGCGCCGAAGCGCACCGGTGTTGCACT
GTTTTGCGAGATCATCGGGCGCGAATGGTGGGAACTGGTCAAGCTCAACCTTCTGTTTCTGGTCGCCGCGTTGCCTGTCG
TCACCCTGCCCGCAGCCCTCTTCGCCACCGCCAGTATGTGTCGCGCCATGGTGGAGGACCGCAACGTCTACCTGCTGCGT
GATTTTGCCGAAGCCTTTCGCCGCTATTTAGCCGTGGCAACGGGATGGGGTCTGGCAACCGGTCTGGCGCTGTGGATCGG
TTCTTGTGCGATCTTAACCTATGGCGCCCAAGTGCGCGACAGCCTGATCTACGCCGGCCCTCTGGCTGTCAGCCTTGTCG
CAACCGGTTTTGTGGGCGTGTGGTCGGTGCATTTCATTGTGCTTGCGGTGATGAGCAAGCGTGGTGTCCTGGAGATCCTG
CGGCTATCGGCGCTGGCAACGCTTCTGCGGCCCTTGCCGACGGTGGCAGCGCTGGTGTTTGTCGCGGCCCTCTGGCTTGT
GCATGTGCTGCTCTATCCGGTTTCTGTCTTCATGCCGGCAATGATCAATTTTTCACTTGGAATGTTCGCCGTTTCATTCG
CCGCGCATCGGGCAGCCGCACTGGTTTTGGCCGAGCCTGATGCGGCGTATCGGACAACCAAAATATCATAG

Upstream 100 bases:

>100_bases
CAGGCTTGGTGAGCAGGTGCGCCTCACCGCCGACATGACCAATGCGCAATTGTTCGATCCGCAAACCGAGCGGTCGATCC
TTTACTGACAGGACAACACG

Downstream 100 bases:

>100_bases
GAAGCCGCTGGGAGGCGCTTTCAACGAGACAATCAGGGAGGAGAACAGAATGTACAGGCAGAAATTTGGGATATCGCTGA
CCATTGCCGCTGCGGCACTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MQWLEAIWTKEGKGIAKDAPKRTGVALFCEIIGREWWELVKLNLLFLVAALPVVTLPAALFATASMCRAMVEDRNVYLLR
DFAEAFRRYLAVATGWGLATGLALWIGSCAILTYGAQVRDSLIYAGPLAVSLVATGFVGVWSVHFIVLAVMSKRGVLEIL
RLSALATLLRPLPTVAALVFVAALWLVHVLLYPVSVFMPAMINFSLGMFAVSFAAHRAAALVLAEPDAAYRTTKIS

Sequences:

>Translated_236_residues
MQWLEAIWTKEGKGIAKDAPKRTGVALFCEIIGREWWELVKLNLLFLVAALPVVTLPAALFATASMCRAMVEDRNVYLLR
DFAEAFRRYLAVATGWGLATGLALWIGSCAILTYGAQVRDSLIYAGPLAVSLVATGFVGVWSVHFIVLAVMSKRGVLEIL
RLSALATLLRPLPTVAALVFVAALWLVHVLLYPVSVFMPAMINFSLGMFAVSFAAHRAAALVLAEPDAAYRTTKIS
>Mature_236_residues
MQWLEAIWTKEGKGIAKDAPKRTGVALFCEIIGREWWELVKLNLLFLVAALPVVTLPAALFATASMCRAMVEDRNVYLLR
DFAEAFRRYLAVATGWGLATGLALWIGSCAILTYGAQVRDSLIYAGPLAVSLVATGFVGVWSVHFIVLAVMSKRGVLEIL
RLSALATLLRPLPTVAALVFVAALWLVHVLLYPVSVFMPAMINFSLGMFAVSFAAHRAAALVLAEPDAAYRTTKIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25668; Mature: 25668

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWLEAIWTKEGKGIAKDAPKRTGVALFCEIIGREWWELVKLNLLFLVAALPVVTLPAAL
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FATASMCRAMVEDRNVYLLRDFAEAFRRYLAVATGWGLATGLALWIGSCAILTYGAQVRD
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
SLIYAGPLAVSLVATGFVGVWSVHFIVLAVMSKRGVLEILRLSALATLLRPLPTVAALVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAALWLVHVLLYPVSVFMPAMINFSLGMFAVSFAAHRAAALVLAEPDAAYRTTKIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC
>Mature Secondary Structure
MQWLEAIWTKEGKGIAKDAPKRTGVALFCEIIGREWWELVKLNLLFLVAALPVVTLPAAL
CCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FATASMCRAMVEDRNVYLLRDFAEAFRRYLAVATGWGLATGLALWIGSCAILTYGAQVRD
HHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
SLIYAGPLAVSLVATGFVGVWSVHFIVLAVMSKRGVLEILRLSALATLLRPLPTVAALVF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VAALWLVHVLLYPVSVFMPAMINFSLGMFAVSFAAHRAAALVLAEPDAAYRTTKIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA