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The map label for this gene is yurM [H]

Identifier: 222102668

GI number: 222102668

Start: 313134

End: 313976

Strand: Reverse

Name: yurM [H]

Synonym: Avi_7335

Alternate gene names: 222102668

Gene position: 313976-313134 (Counterclockwise)

Preceding gene: 222102669

Following gene: 222102667

Centisome position: 49.7

GC content: 55.87

Gene sequence:

>843_bases
ATGAAAACCCGCACAAGTGAGCGCCTCGGCGATCTGCTGAGCTATATTTTTATGGCCATTACCTTTGCTTTTTTCGCATG
GCCGCTGCTGTGGCTTTTGTCTTTGGCGCTCAGAACCCGCAAGGAAGTGTTTCTGGGTGTCACTCGCTTCATTCCCAAAG
CACCGACACTGGATAATTTTGCGATGATCCTGTCCTCGGACAAGTTCATTTCTTACCTTTGGAATGCGCTGAAACTCTCC
TGCCTGTCAGCGGCAGGCTGCCTGATCGTGGCCTTGCCTGCGGCCTATGCCTTTTCGCGCTTTCAGTTCAAGGGCAAGGG
CGCGTGGATGATGGCGCTGCTATCGGTGCAGATGATCTCCCCGCTGGTGATCATGGTGCCGCTCTACCGCTACATGGCGG
CCATGGGCCTGCTGGACAGCCATTTCGGCACCACCATGGTCTATGTGGCCCTTGCCGTTCCGGTCTCCACCTGGATTTTG
AAAGGCTCGATCGACGGCATTCCCAAAACCCTTGATGAAGCGGCGATGATGGATGGTTGCACCCGGTTTGGTGTGTTTAT
CCGCGTTATCCTGCCGCTGTCCACGCCGGGCATCGCTTCGGCCTTCATCATTGCCGTGATCAGTGGCTGGTCGCAATTTC
TGGTGCCGTTCCTGCTGATTACCAAGGAATCCCTCACCCCGATTGGCGTCGGGATTTTTCAATATGCCGGTACGCAAAAT
GACTCTTCCATCCAACTTCTCGCGGCGGCCTGCCTTGTATCAGTTGTGCCTGCCATCATTGCCTTCCTCTCGCTCCAGCG
CCTGATATTGGGCGCAATGACCGCCGGAGCCGTGAAGGGCTGA

Upstream 100 bases:

>100_bases
ATGATCTGGCGGCGGGCGCTGCCCTGTCCATCCTGATGCTGGTAATCTCGCTGACGCTTGCCTTGATCTATGCCGCCTTC
CTGCCAAAGGGAGATGACCA

Downstream 100 bases:

>100_bases
ACCCATTCTGTTGAAAGACTTTAGGAAAATATCATGAGCCTGACCTATACCCAACGCCTTGAACGGATCGAAGTTCGCAA
CGCAGAATTCCAGTTCTGGC

Product: ABC transporter membrane spanning protein (sugar)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MKTRTSERLGDLLSYIFMAITFAFFAWPLLWLLSLALRTRKEVFLGVTRFIPKAPTLDNFAMILSSDKFISYLWNALKLS
CLSAAGCLIVALPAAYAFSRFQFKGKGAWMMALLSVQMISPLVIMVPLYRYMAAMGLLDSHFGTTMVYVALAVPVSTWIL
KGSIDGIPKTLDEAAMMDGCTRFGVFIRVILPLSTPGIASAFIIAVISGWSQFLVPFLLITKESLTPIGVGIFQYAGTQN
DSSIQLLAAACLVSVVPAIIAFLSLQRLILGAMTAGAVKG

Sequences:

>Translated_280_residues
MKTRTSERLGDLLSYIFMAITFAFFAWPLLWLLSLALRTRKEVFLGVTRFIPKAPTLDNFAMILSSDKFISYLWNALKLS
CLSAAGCLIVALPAAYAFSRFQFKGKGAWMMALLSVQMISPLVIMVPLYRYMAAMGLLDSHFGTTMVYVALAVPVSTWIL
KGSIDGIPKTLDEAAMMDGCTRFGVFIRVILPLSTPGIASAFIIAVISGWSQFLVPFLLITKESLTPIGVGIFQYAGTQN
DSSIQLLAAACLVSVVPAIIAFLSLQRLILGAMTAGAVKG
>Mature_280_residues
MKTRTSERLGDLLSYIFMAITFAFFAWPLLWLLSLALRTRKEVFLGVTRFIPKAPTLDNFAMILSSDKFISYLWNALKLS
CLSAAGCLIVALPAAYAFSRFQFKGKGAWMMALLSVQMISPLVIMVPLYRYMAAMGLLDSHFGTTMVYVALAVPVSTWIL
KGSIDGIPKTLDEAAMMDGCTRFGVFIRVILPLSTPGIASAFIIAVISGWSQFLVPFLLITKESLTPIGVGIFQYAGTQN
DSSIQLLAAACLVSVVPAIIAFLSLQRLILGAMTAGAVKG

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=281, Percent_Identity=28.1138790035587, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1790464, Length=277, Percent_Identity=31.0469314079422, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI1789860, Length=235, Percent_Identity=25.9574468085106, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30416; Mature: 30416

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure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CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]