Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102665

Identifier: 222102665

GI number: 222102665

Start: 307726

End: 308790

Strand: Direct

Name: 222102665

Synonym: Avi_7332

Alternate gene names: NA

Gene position: 307726-308790 (Clockwise)

Preceding gene: 222102657

Following gene: 222102671

Centisome position: 48.71

GC content: 57.65

Gene sequence:

>1065_bases
GTGGGACGACGAGTTGTAAGGCATCAGACGGTTCGGCCCTTGGAGGATCGCGACGCTCAGGGCCTCAGTCCTGAAGATAT
CGCAGATCATAACGGACGCACCGTTTCTGCGCTTTTGCTGCGTGAAGGGCCGCTGACGCGCCAGGAGCTTGCCGCACGGC
TTAAGCTCACAGAGCCTGCCATTACCGGCATTCTTCAACGGCTGTTGTCGGCAGGCCTTGTGTCCAAGGGCAATCGCCAG
ACCAGTACACGCTATAAAGCGGCGGAATTTTCACTTGTGTCATCCGGCGCTTACGGTCTTGGTGTTGAGCGTTGCCAGAA
TGGTGGCTCCCTTGCTTTGTGTAATCTCGCCGGTGAGATGGTGCTTTATCAGCGCTTTGATCAAGATGAAGCCTTCTTTG
CTGCTGTTCGGCAGATTGTGCAGGCAGAGATGGGATTCCCCGCCCCCATCGGTGTCGGCGTGGTGATGAATGCAGACAAG
GATGATGCATTCACGACGGCTTTTGGCGAATTGCCAAGCTTTACTCTGTCCAAACCCGAGGCGGTGCTGGCTGGGGAGAG
ATTGTTTGGCATCGGTGAGCCGGAAGGCGGGCTGGTTGTTGTGCTGATTGATGAACAGGTGCAGGCGGGCCTGATCATCA
ATGGCCGCTTTTACCGCGGCACGCATGGCAGAGCGGGCGCAATTGGCGCCATGCGTCCTGGCCTGGCGGAAGGCACACTG
GATGTGATGGCGAGTGCGGCGTCTTACAGGGCTTTCATTGCCGCGCAGGGTGAAAACGAGGTTGATCGCTGGATTGAACA
GGCCGCCAGTCGCCTTCTGGACGGCGTTGTCACCATTGCCGGTTTCATATCGCCGGGAGCCATGTTGCTGGGCGGGCAAT
TGCCCGCCGATGTGATTGATCGGCTGATTGAAAAAATCGCAGACGTCCGGCTGGGCAAAGAGCGATATTTTGTGCCCGCA
GCCTGGATTCCGCCCGTACGCCCTTTAAGCTTTCCAGACCGCGACGCCGCTTATGGTGCTGCTGTTGCGCCGTTTATCGA
ACTGCTGCTGCCAAAACCGAATTGA

Upstream 100 bases:

>100_bases
GCTTCAACGAAGTGATTGACTGTATTGAGCAAAGCTTGTTTGCTTTCCTATGTTAACTGACGGCAAAGATTGCAATGAAA
CCGCCGATGGAAGTGTGAGT

Downstream 100 bases:

>100_bases
TCGATGCAGGCCGTATCGCTGTCGTCAGCGGTGAACGGCTGAGATGGGCAGAATCGGCAGAGGGAAGACAGAGCCGGTCG
GCGAGCGCCATGGCGGCAGC

Product: Transcriptional regulator/sugar kinase

Products: NA

Alternate protein names: Rok Family Protein; Transcriptional Regulator/Sugar Kinase; Transcriptional Regulator Protein; ROK Family Protein

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MGRRVVRHQTVRPLEDRDAQGLSPEDIADHNGRTVSALLLREGPLTRQELAARLKLTEPAITGILQRLLSAGLVSKGNRQ
TSTRYKAAEFSLVSSGAYGLGVERCQNGGSLALCNLAGEMVLYQRFDQDEAFFAAVRQIVQAEMGFPAPIGVGVVMNADK
DDAFTTAFGELPSFTLSKPEAVLAGERLFGIGEPEGGLVVVLIDEQVQAGLIINGRFYRGTHGRAGAIGAMRPGLAEGTL
DVMASAASYRAFIAAQGENEVDRWIEQAASRLLDGVVTIAGFISPGAMLLGGQLPADVIDRLIEKIADVRLGKERYFVPA
AWIPPVRPLSFPDRDAAYGAAVAPFIELLLPKPN

Sequences:

>Translated_354_residues
MGRRVVRHQTVRPLEDRDAQGLSPEDIADHNGRTVSALLLREGPLTRQELAARLKLTEPAITGILQRLLSAGLVSKGNRQ
TSTRYKAAEFSLVSSGAYGLGVERCQNGGSLALCNLAGEMVLYQRFDQDEAFFAAVRQIVQAEMGFPAPIGVGVVMNADK
DDAFTTAFGELPSFTLSKPEAVLAGERLFGIGEPEGGLVVVLIDEQVQAGLIINGRFYRGTHGRAGAIGAMRPGLAEGTL
DVMASAASYRAFIAAQGENEVDRWIEQAASRLLDGVVTIAGFISPGAMLLGGQLPADVIDRLIEKIADVRLGKERYFVPA
AWIPPVRPLSFPDRDAAYGAAVAPFIELLLPKPN
>Mature_353_residues
GRRVVRHQTVRPLEDRDAQGLSPEDIADHNGRTVSALLLREGPLTRQELAARLKLTEPAITGILQRLLSAGLVSKGNRQT
STRYKAAEFSLVSSGAYGLGVERCQNGGSLALCNLAGEMVLYQRFDQDEAFFAAVRQIVQAEMGFPAPIGVGVVMNADKD
DAFTTAFGELPSFTLSKPEAVLAGERLFGIGEPEGGLVVVLIDEQVQAGLIINGRFYRGTHGRAGAIGAMRPGLAEGTLD
VMASAASYRAFIAAQGENEVDRWIEQAASRLLDGVVTIAGFISPGAMLLGGQLPADVIDRLIEKIADVRLGKERYFVPAA
WIPPVRPLSFPDRDAAYGAAVAPFIELLLPKPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37879; Mature: 37748

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRVVRHQTVRPLEDRDAQGLSPEDIADHNGRTVSALLLREGPLTRQELAARLKLTEPA
CCCCCCHHHCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHH
ITGILQRLLSAGLVSKGNRQTSTRYKAAEFSLVSSGAYGLGVERCQNGGSLALCNLAGEM
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHCCCCCEEEEHHHHHH
VLYQRFDQDEAFFAAVRQIVQAEMGFPAPIGVGVVMNADKDDAFTTAFGELPSFTLSKPE
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCC
AVLAGERLFGIGEPEGGLVVVLIDEQVQAGLIINGRFYRGTHGRAGAIGAMRPGLAEGTL
HHHCCCCEEECCCCCCCEEEEEECCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCHH
DVMASAASYRAFIAAQGENEVDRWIEQAASRLLDGVVTIAGFISPGAMLLGGQLPADVID
HHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
RLIEKIADVRLGKERYFVPAAWIPPVRPLSFPDRDAAYGAAVAPFIELLLPKPN
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GRRVVRHQTVRPLEDRDAQGLSPEDIADHNGRTVSALLLREGPLTRQELAARLKLTEPA
CCCCCHHHCCCCCCCCCCCCCCCHHHHCCCCCEEEEEEECCCCCCHHHHHHHHCCCCHH
ITGILQRLLSAGLVSKGNRQTSTRYKAAEFSLVSSGAYGLGVERCQNGGSLALCNLAGEM
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHEEEECCCCCCCCHHHHCCCCCEEEEHHHHHH
VLYQRFDQDEAFFAAVRQIVQAEMGFPAPIGVGVVMNADKDDAFTTAFGELPSFTLSKPE
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCCCC
AVLAGERLFGIGEPEGGLVVVLIDEQVQAGLIINGRFYRGTHGRAGAIGAMRPGLAEGTL
HHHCCCCEEECCCCCCCEEEEEECCCCCCCEEECCEEEECCCCCCCCCCCCCCCCCCCHH
DVMASAASYRAFIAAQGENEVDRWIEQAASRLLDGVVTIAGFISPGAMLLGGQLPADVID
HHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHH
RLIEKIADVRLGKERYFVPAAWIPPVRPLSFPDRDAAYGAAVAPFIELLLPKPN
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA