| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is fecC [H]
Identifier: 222102636
GI number: 222102636
Start: 247680
End: 248708
Strand: Reverse
Name: fecC [H]
Synonym: Avi_7290
Alternate gene names: 222102636
Gene position: 248708-247680 (Counterclockwise)
Preceding gene: 222102637
Following gene: 222102635
Centisome position: 39.37
GC content: 60.74
Gene sequence:
>1029_bases ATGACCGACCGCACGGCTGGCTATATTGCAGAAACCGATGTAGGACGAGTGCTTGCGCTTGCCGCATTACTCTGTCTGCT CATGCTTGCCACCGTGATCGCCATCTCACTGGGTGCGGCGATGATGCCGCCCGCCAAAGTCATCTCGGCACTCTTCGCAT CCGAGACGTCGCGGGATCACCTGATCGTCATGACCATTCGCCTGCCACGTGCGCTTGCGGCGCTGCTGGCAGGTAGCGCA CTGGCTGTCTCTGGTGCCATCATGCAGGCGGTGACAAACAATCCCCTCGCCTCACCGGACCTGCTCGGCATCAACGCAGG CGCAGCCTTTGCAGTCGTCTCCGTCATGGCCATTTTCGGTGCCGGTATCGGCGACATCTACGTTTGGTTTGCTTTTCTCG GCGCAGCCATCGCCGCGACCGTTGTCTATGCGCTGGGTTCGATGGGAATGGTGGGGCAATCCCCCCTCAGGCTCGTGCTG GCGGGAGCTATCGTTGCGACCTTCCTGACCTCTGTGACCACCGTTATGCTGATCTTTGACCAGAGTACTCTTGATGCCGT GCGCCTCTGGACCGCAGGCTCGGTGACGGGACGAAACATCGAACAGGTCAAGACCGTTGCGCCCTATATCATTGCCGGGC TGATCGCTGCCCTGCCCTTTGGCCGTCATCTGACGACAATCAGCCTTGGCGCGGATACGTCGCGCGCGCTCGGCCAGAAC CCAATCGTCTGGCGGGGCCTATCGGTCGCGGTGGTCATTTTGCTTGCCGGTGGTGCCGTCGCACTTGCCGGACCGATCGG CTTCGTCGGGCTTGTCGTGCCCCATGTTGCAAGGATGTGCATCGGCGTTGACTATCGCTGGATCATTCCTTTTTCAGCAC TCGGCGGTGCGTTGCTGGTGATCGTGGCAGATACGGTCGGACGATTGGTGTTTGGAAGCCAAAGCTTTCCCGTCGGTGTC ACCATTGCGTTGATCGGCGCGCCGTTTTTCCTCTATCTCGCCCGCACGCGGCTGAGGGACGGCGCATGA
Upstream 100 bases:
>100_bases GCGCCTATCGGGTCGACCGCGGCCCTTGGCAGAGCTTCTACGGCATCAGCTCGGCAAACCGTATCCTCGACGATGTCGAA CGCTTCATCCTGACGACCCC
Downstream 100 bases:
>100_bases TCCGGGTTTTCTTCGTCCTGATACTTCTGCTCACATTTCTCGTGGCGGCAAGTCTCGCTTTTGGTGACGTGTCCTTGGGC TGGCAAGAACTCTACGATGT
Product: ABC transporter membrane spanning protein (iron(III) dicitrate)
Products: ADP; phosphate; ferric enterobactin [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTDRTAGYIAETDVGRVLALAALLCLLMLATVIAISLGAAMMPPAKVISALFASETSRDHLIVMTIRLPRALAALLAGSA LAVSGAIMQAVTNNPLASPDLLGINAGAAFAVVSVMAIFGAGIGDIYVWFAFLGAAIAATVVYALGSMGMVGQSPLRLVL AGAIVATFLTSVTTVMLIFDQSTLDAVRLWTAGSVTGRNIEQVKTVAPYIIAGLIAALPFGRHLTTISLGADTSRALGQN PIVWRGLSVAVVILLAGGAVALAGPIGFVGLVVPHVARMCIGVDYRWIIPFSALGGALLVIVADTVGRLVFGSQSFPVGV TIALIGAPFFLYLARTRLRDGA
Sequences:
>Translated_342_residues MTDRTAGYIAETDVGRVLALAALLCLLMLATVIAISLGAAMMPPAKVISALFASETSRDHLIVMTIRLPRALAALLAGSA LAVSGAIMQAVTNNPLASPDLLGINAGAAFAVVSVMAIFGAGIGDIYVWFAFLGAAIAATVVYALGSMGMVGQSPLRLVL AGAIVATFLTSVTTVMLIFDQSTLDAVRLWTAGSVTGRNIEQVKTVAPYIIAGLIAALPFGRHLTTISLGADTSRALGQN PIVWRGLSVAVVILLAGGAVALAGPIGFVGLVVPHVARMCIGVDYRWIIPFSALGGALLVIVADTVGRLVFGSQSFPVGV TIALIGAPFFLYLARTRLRDGA >Mature_341_residues TDRTAGYIAETDVGRVLALAALLCLLMLATVIAISLGAAMMPPAKVISALFASETSRDHLIVMTIRLPRALAALLAGSAL AVSGAIMQAVTNNPLASPDLLGINAGAAFAVVSVMAIFGAGIGDIYVWFAFLGAAIAATVVYALGSMGMVGQSPLRLVLA GAIVATFLTSVTTVMLIFDQSTLDAVRLWTAGSVTGRNIEQVKTVAPYIIAGLIAALPFGRHLTTISLGADTSRALGQNP IVWRGLSVAVVILLAGGAVALAGPIGFVGLVVPHVARMCIGVDYRWIIPFSALGGALLVIVADTVGRLVFGSQSFPVGVT IALIGAPFFLYLARTRLRDGA
Specific function: Part of the ABC transporter complex yfiYZ/yfhA/yusV involved in import of the iron-hydroxamate siderophores schizokinen, arthrobactin and corprogen (Probable) [H]
COG id: COG0609
COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786805, Length=307, Percent_Identity=41.042345276873, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI1790740, Length=283, Percent_Identity=34.6289752650177, Blast_Score=138, Evalue=7e-34, Organism=Escherichia coli, GI1790741, Length=277, Percent_Identity=34.2960288808664, Blast_Score=135, Evalue=3e-33, Organism=Escherichia coli, GI1786347, Length=321, Percent_Identity=34.8909657320872, Blast_Score=132, Evalue=4e-32, Organism=Escherichia coli, GI1788004, Length=287, Percent_Identity=36.2369337979094, Blast_Score=129, Evalue=3e-31, Organism=Escherichia coli, GI1786804, Length=317, Percent_Identity=35.0157728706625, Blast_Score=114, Evalue=7e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000522 [H]
Pfam domain/function: PF01032 FecCD [H]
EC number: NA
Molecular weight: Translated: 35082; Mature: 34951
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: PS00850 GLY_RADICAL_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRTAGYIAETDVGRVLALAALLCLLMLATVIAISLGAAMMPPAKVISALFASETSRDH CCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCE LIVMTIRLPRALAALLAGSALAVSGAIMQAVTNNPLASPDLLGINAGAAFAVVSVMAIFG EEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHC AGIGDIYVWFAFLGAAIAATVVYALGSMGMVGQSPLRLVLAGAIVATFLTSVTTVMLIFD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEC QSTLDAVRLWTAGSVTGRNIEQVKTVAPYIIAGLIAALPFGRHLTTISLGADTSRALGQN CCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCC PIVWRGLSVAVVILLAGGAVALAGPIGFVGLVVPHVARMCIGVDYRWIIPFSALGGALLV CCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCHHHHH IVADTVGRLVFGSQSFPVGVTIALIGAPFFLYLARTRLRDGA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDRTAGYIAETDVGRVLALAALLCLLMLATVIAISLGAAMMPPAKVISALFASETSRDH CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCE LIVMTIRLPRALAALLAGSALAVSGAIMQAVTNNPLASPDLLGINAGAAFAVVSVMAIFG EEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHHHHC AGIGDIYVWFAFLGAAIAATVVYALGSMGMVGQSPLRLVLAGAIVATFLTSVTTVMLIFD CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEC QSTLDAVRLWTAGSVTGRNIEQVKTVAPYIIAGLIAALPFGRHLTTISLGADTSRALGQN CCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHCCCC PIVWRGLSVAVVILLAGGAVALAGPIGFVGLVVPHVARMCIGVDYRWIIPFSALGGALLV CCEECHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHCHHHHH IVADTVGRLVFGSQSFPVGVTIALIGAPFFLYLARTRLRDGA HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; ferric enterobactin [Periplasm]; H2O [C]
Specific reaction: ATP + ferric enterobactin [Periplasm] + H2O = ADP + phosphate + ferric enterobactin [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]