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The map label for this gene is dppC [H]

Identifier: 222102618

GI number: 222102618

Start: 225182

End: 226102

Strand: Reverse

Name: dppC [H]

Synonym: Avi_7270

Alternate gene names: 222102618

Gene position: 226102-225182 (Counterclockwise)

Preceding gene: 222102619

Following gene: 222102617

Centisome position: 35.79

GC content: 57.11

Gene sequence:

>921_bases
CTGATGACCTTCACCAGCCCAGCCCCTTCGGCCATCATGGCACCGGTCCTGTCGCGATCGATCCCCCGACGGATCTATGA
CAAGGCTTCTTCCACACCGGGTTTTCGCATTGGTGTCGCCATCTTTCTGCTGCTGGCTCTCGCAGCGGCACTCTATCCCG
AACTGAGCGGTCTCGACCCGACAAAAATGAACGTGCGTGCCCGACTGCTACCGCCCCTGTTCATTGGTGAGACCTGGAGT
TTTGCCCACCCGCTTGGCACCGATCAGATCGGCCGTGACATGCTGGTCCGCTCGCTGGTTGGCTTGCGCTATTCTTTCCT
GATTGGTGTATCCTCTGTCGTGGTGATGCTGATTATCGGTTGCGTACTTGGCACGCTTGCTGGCTATTTTGGCGGACGCA
CCGATGCGGTCATCATGCGCATGACCGATGCGCAGCTATCGATCCCGATGATCATTCTAGCCATCTCGGTTCTGGGCGTA
TCGCGTCCCACCATTCCCGCCATCATTCTTGTGCTTGGGTTGTCCAATTGGCCGGTCTATGCCCGCATCATGCGCAGCAT
TGTGATGACGGAGCGTCAGAGGGAATATGTCCGTGCCTCAAAGCTCGGTGGCTCCACAGACCTGCGCATTATTCTGACGC
TGCTCGTGCCGCTACTGCTGCCGCCCGTGCTGTTCATCTCGGTGCTGGATGTGGCGCGGATGATGATTTTCGAATCCATT
CTGGGCTTTCTTGGCCTTGGTGTTCAGCCACCGACGCCGACCTTTGGCAATATCATCGCTGATGGACGCAAATATCTGCT
CAACGCCTGGTGGATTGCCACCATGCCCGGAATTTTCCTCGGCCTGACGCTCACCAGTATCAATCTGGTTGGCGCATCGC
TGGAACGGGCAAGAAACACCATTCACGGAGGCGCAGAATAA

Upstream 100 bases:

>100_bases
CGCTGATCCAAGGCATTGCCATCGTCACCAGCGCCATCTTCGTGCTGATCAACATCCTCGTTGATCTCGTTGCCACCACC
ATTGATCCGAGGCTCGAATA

Downstream 100 bases:

>100_bases
TGACAAGCCCGCTTCTTGAACTCAAAGATCTTGTCGTAACTGCTGGCTACACAGAACAGTCGCGCCGGATTCTTGACGGC
ATATCGTTTACCTTGCAGCC

Product: ABC transporter membrane spanning protein (dipeptide)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MMTFTSPAPSAIMAPVLSRSIPRRIYDKASSTPGFRIGVAIFLLLALAAALYPELSGLDPTKMNVRARLLPPLFIGETWS
FAHPLGTDQIGRDMLVRSLVGLRYSFLIGVSSVVVMLIIGCVLGTLAGYFGGRTDAVIMRMTDAQLSIPMIILAISVLGV
SRPTIPAIILVLGLSNWPVYARIMRSIVMTERQREYVRASKLGGSTDLRIILTLLVPLLLPPVLFISVLDVARMMIFESI
LGFLGLGVQPPTPTFGNIIADGRKYLLNAWWIATMPGIFLGLTLTSINLVGASLERARNTIHGGAE

Sequences:

>Translated_306_residues
MMTFTSPAPSAIMAPVLSRSIPRRIYDKASSTPGFRIGVAIFLLLALAAALYPELSGLDPTKMNVRARLLPPLFIGETWS
FAHPLGTDQIGRDMLVRSLVGLRYSFLIGVSSVVVMLIIGCVLGTLAGYFGGRTDAVIMRMTDAQLSIPMIILAISVLGV
SRPTIPAIILVLGLSNWPVYARIMRSIVMTERQREYVRASKLGGSTDLRIILTLLVPLLLPPVLFISVLDVARMMIFESI
LGFLGLGVQPPTPTFGNIIADGRKYLLNAWWIATMPGIFLGLTLTSINLVGASLERARNTIHGGAE
>Mature_306_residues
MMTFTSPAPSAIMAPVLSRSIPRRIYDKASSTPGFRIGVAIFLLLALAAALYPELSGLDPTKMNVRARLLPPLFIGETWS
FAHPLGTDQIGRDMLVRSLVGLRYSFLIGVSSVVVMLIIGCVLGTLAGYFGGRTDAVIMRMTDAQLSIPMIILAISVLGV
SRPTIPAIILVLGLSNWPVYARIMRSIVMTERQREYVRASKLGGSTDLRIILTLLVPLLLPPVLFISVLDVARMMIFESI
LGFLGLGVQPPTPTFGNIIADGRKYLLNAWWIATMPGIFLGLTLTSINLVGASLERARNTIHGGAE

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=266, Percent_Identity=35.3383458646617, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1789964, Length=239, Percent_Identity=38.4937238493724, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1789889, Length=241, Percent_Identity=35.2697095435685, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1787054, Length=218, Percent_Identity=32.5688073394495, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787498, Length=216, Percent_Identity=34.2592592592593, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787549, Length=290, Percent_Identity=31.0344827586207, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1788505, Length=187, Percent_Identity=28.3422459893048, Blast_Score=79, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33132; Mature: 33132

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: PS00012 PHOSPHOPANTETHEINE ; PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTFTSPAPSAIMAPVLSRSIPRRIYDKASSTPGFRIGVAIFLLLALAAALYPELSGLDP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TKMNVRARLLPPLFIGETWSFAHPLGTDQIGRDMLVRSLVGLRYSFLIGVSSVVVMLIIG
CHHCHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVLGTLAGYFGGRTDAVIMRMTDAQLSIPMIILAISVLGVSRPTIPAIILVLGLSNWPVY
HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH
ARIMRSIVMTERQREYVRASKLGGSTDLRIILTLLVPLLLPPVLFISVLDVARMMIFESI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFLGLGVQPPTPTFGNIIADGRKYLLNAWWIATMPGIFLGLTLTSINLVGASLERARNT
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHGGAE
HCCCCC
>Mature Secondary Structure
MMTFTSPAPSAIMAPVLSRSIPRRIYDKASSTPGFRIGVAIFLLLALAAALYPELSGLDP
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
TKMNVRARLLPPLFIGETWSFAHPLGTDQIGRDMLVRSLVGLRYSFLIGVSSVVVMLIIG
CHHCHHHHHCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CVLGTLAGYFGGRTDAVIMRMTDAQLSIPMIILAISVLGVSRPTIPAIILVLGLSNWPVY
HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHH
ARIMRSIVMTERQREYVRASKLGGSTDLRIILTLLVPLLLPPVLFISVLDVARMMIFESI
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGFLGLGVQPPTPTFGNIIADGRKYLLNAWWIATMPGIFLGLTLTSINLVGASLERARNT
HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IHGGAE
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]