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The map label for this gene is amaB [C]

Identifier: 222102615

GI number: 222102615

Start: 221233

End: 222468

Strand: Reverse

Name: amaB [C]

Synonym: Avi_7267

Alternate gene names: 222102615

Gene position: 222468-221233 (Counterclockwise)

Preceding gene: 222102616

Following gene: 222102614

Centisome position: 35.21

GC content: 59.14

Gene sequence:

>1236_bases
ATGGTCGATACATTGTCATCCTTCGGCGGCGGTCCGGACGGTTCCATGAACCGGCTTACATTGTCGCAGGAAGATGGCAG
GGCGCGCGACTGGCTTGCGTCCTGGTTTGCTGAAAATGGGTTTGTCCAATCCGTGGACGCCATTGGCAATCAGTTTGGTT
CAGCACCGCTGGCCGGGGCAAATGCCCCTGTCGTCATGGTTGGTTCTCACATTGACAGTCAGCCGAATGGTGGGCGTTTT
GATGGAGCACTGGGCGTCGTTGCGGCCTGCGAGGCCGTTTTGGCGGTGCGTGAACGATTGGCGGCGGAAAATCGTCTTGC
GGCCTGCAATTTCCAGGTCGTGAACTGGACAAATGAGGAAGGGGCGCGGTTTCAACCGAGCCTGTTGGGAAGTAGCGTTT
TTACCGGTGCGGCCGAACTGGACTGGGCGCTTGACAGGGCCGATGGCAACGGCGTCACGGTTCGCCAGTCGCTTCAGGAG
ATTGGCTATGCGGGCAAGGACAAGGTACCCGTGCCCGACGCCTTGATCGAGCTGCACATTGAAGGTGCAAGCACTCTGTT
CGACGCTGAGGAGAAATTCGGGGCCTTCACCCGTTTCTGGGGGGCCACAAAATACCGCCTCGCTTTTCTCGGCTGCCAGG
CTCACACCGGTCCGACACCCATGGCGGAGCGCAAGGATGCACTGTTGGGCGCCGCCTATCTGATGGCCGATCTGCGGGCT
ATGGTGGACGCTTACGGACTTGACCTTCACACCTCTGTTGGCCGTCTGGAGGTTTTTCCCAATTCGCCCAATATCGTTCC
GGCGGAAGCCGTGCTGTTCATCGAGTTGCGATCTGCCTCGCCGGAGATTTTGGAGGAGGCAGAACAGAAGCTGAAGGTTG
CGGCTGAAACTGCTGCTGCAAAAGCTAAAATCGATTATGAAATACGCTCCATTGACCGTCGCAAGGCAGGCAATTTTGCG
CCCGGTCTGATTGCCCTGGCAGAACAGACGGCCAAAAGCTACGGCGAGCCGATGCGCCACCTCGATACGGTCGGCGGCCA
TGACGCCGTGGCGCTGTCAGCTGTTTGTCCAGCCGTGGTGCTTGCCGTGCGCAGCCAGAACGGCGTCATTCATCACCCCA
CGGAATATACGACACCAGAAGACCAGGCATTTGGCACGCAGGTTCTGGCCGACATGCTCTATCGCCTTGCCTGCGACGGG
CTGGAGGCTGCGCAGCACAATGAGGCGGCGCAATGA

Upstream 100 bases:

>100_bases
TTTTCCGATTATTTTTCGCAATCAAACGTGGACATCATCAATGCCTGAAGCGTCTTCAAAATCATCCAAAGCGCCTATTA
ATACCAAGAGGTTTCAGGCG

Downstream 100 bases:

>100_bases
AACCACTCGGCACACCAGACAATGAGGGTGAAGCCCGCGCTGAGCGCGCCTTATCGCGGTTCACCACCCTCCCCTTGCAC
ACCCTGACCTACCGTGTCGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MVDTLSSFGGGPDGSMNRLTLSQEDGRARDWLASWFAENGFVQSVDAIGNQFGSAPLAGANAPVVMVGSHIDSQPNGGRF
DGALGVVAACEAVLAVRERLAAENRLAACNFQVVNWTNEEGARFQPSLLGSSVFTGAAELDWALDRADGNGVTVRQSLQE
IGYAGKDKVPVPDALIELHIEGASTLFDAEEKFGAFTRFWGATKYRLAFLGCQAHTGPTPMAERKDALLGAAYLMADLRA
MVDAYGLDLHTSVGRLEVFPNSPNIVPAEAVLFIELRSASPEILEEAEQKLKVAAETAAAKAKIDYEIRSIDRRKAGNFA
PGLIALAEQTAKSYGEPMRHLDTVGGHDAVALSAVCPAVVLAVRSQNGVIHHPTEYTTPEDQAFGTQVLADMLYRLACDG
LEAAQHNEAAQ

Sequences:

>Translated_411_residues
MVDTLSSFGGGPDGSMNRLTLSQEDGRARDWLASWFAENGFVQSVDAIGNQFGSAPLAGANAPVVMVGSHIDSQPNGGRF
DGALGVVAACEAVLAVRERLAAENRLAACNFQVVNWTNEEGARFQPSLLGSSVFTGAAELDWALDRADGNGVTVRQSLQE
IGYAGKDKVPVPDALIELHIEGASTLFDAEEKFGAFTRFWGATKYRLAFLGCQAHTGPTPMAERKDALLGAAYLMADLRA
MVDAYGLDLHTSVGRLEVFPNSPNIVPAEAVLFIELRSASPEILEEAEQKLKVAAETAAAKAKIDYEIRSIDRRKAGNFA
PGLIALAEQTAKSYGEPMRHLDTVGGHDAVALSAVCPAVVLAVRSQNGVIHHPTEYTTPEDQAFGTQVLADMLYRLACDG
LEAAQHNEAAQ
>Mature_411_residues
MVDTLSSFGGGPDGSMNRLTLSQEDGRARDWLASWFAENGFVQSVDAIGNQFGSAPLAGANAPVVMVGSHIDSQPNGGRF
DGALGVVAACEAVLAVRERLAAENRLAACNFQVVNWTNEEGARFQPSLLGSSVFTGAAELDWALDRADGNGVTVRQSLQE
IGYAGKDKVPVPDALIELHIEGASTLFDAEEKFGAFTRFWGATKYRLAFLGCQAHTGPTPMAERKDALLGAAYLMADLRA
MVDAYGLDLHTSVGRLEVFPNSPNIVPAEAVLFIELRSASPEILEEAEQKLKVAAETAAAKAKIDYEIRSIDRRKAGNFA
PGLIALAEQTAKSYGEPMRHLDTVGGHDAVALSAVCPAVVLAVRSQNGVIHHPTEYTTPEDQAFGTQVLADMLYRLACDG
LEAAQHNEAAQ

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=399, Percent_Identity=28.5714285714286, Blast_Score=149, Evalue=3e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF01546 Peptidase_M20 [H]

EC number: 3.5.3.- [C]

Molecular weight: Translated: 43772; Mature: 43772

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDTLSSFGGGPDGSMNRLTLSQEDGRARDWLASWFAENGFVQSVDAIGNQFGSAPLAGA
CCCCCHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
NAPVVMVGSHIDSQPNGGRFDGALGVVAACEAVLAVRERLAAENRLAACNFQVVNWTNEE
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC
GARFQPSLLGSSVFTGAAELDWALDRADGNGVTVRQSLQEIGYAGKDKVPVPDALIELHI
CCEECHHHHCHHHHCCCHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE
EGASTLFDAEEKFGAFTRFWGATKYRLAFLGCQAHTGPTPMAERKDALLGAAYLMADLRA
CCCHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MVDAYGLDLHTSVGRLEVFPNSPNIVPAEAVLFIELRSASPEILEEAEQKLKVAAETAAA
HHHHHCCCEECCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
KAKIDYEIRSIDRRKAGNFAPGLIALAEQTAKSYGEPMRHLDTVGGHDAVALSAVCPAVV
HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHH
LAVRSQNGVIHHPTEYTTPEDQAFGTQVLADMLYRLACDGLEAAQHNEAAQ
HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
>Mature Secondary Structure
MVDTLSSFGGGPDGSMNRLTLSQEDGRARDWLASWFAENGFVQSVDAIGNQFGSAPLAGA
CCCCCHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC
NAPVVMVGSHIDSQPNGGRFDGALGVVAACEAVLAVRERLAAENRLAACNFQVVNWTNEE
CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC
GARFQPSLLGSSVFTGAAELDWALDRADGNGVTVRQSLQEIGYAGKDKVPVPDALIELHI
CCEECHHHHCHHHHCCCHHHHHEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEE
EGASTLFDAEEKFGAFTRFWGATKYRLAFLGCQAHTGPTPMAERKDALLGAAYLMADLRA
CCCHHHHCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MVDAYGLDLHTSVGRLEVFPNSPNIVPAEAVLFIELRSASPEILEEAEQKLKVAAETAAA
HHHHHCCCEECCCCEEEEECCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH
KAKIDYEIRSIDRRKAGNFAPGLIALAEQTAKSYGEPMRHLDTVGGHDAVALSAVCPAVV
HHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHH
LAVRSQNGVIHHPTEYTTPEDQAFGTQVLADMLYRLACDGLEAAQHNEAAQ
HHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA