Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is ordL [H]

Identifier: 222102606

GI number: 222102606

Start: 213106

End: 214452

Strand: Reverse

Name: ordL [H]

Synonym: Avi_7256

Alternate gene names: 222102606

Gene position: 214452-213106 (Counterclockwise)

Preceding gene: 222102607

Following gene: 222102605

Centisome position: 33.94

GC content: 57.91

Gene sequence:

>1347_bases
ATGAACAAAATATCAGTCAAACGTTTGCCCGTTGAAAATGGTGTCTCCGGCTGGGAGGCGATCAGCACGCGTTCGTTTCC
CCTCCGCAGCCTCGAAGGCAACGTGACTGCGGATTGGCTGATTGTCGGTGCGGGCTTTGCGGGTCTTTCCGCTGCCCGTC
GTCTGCTACAGCTTCGACCAGACGACAAGATTGTCATTCTCGACGCAAGCGAAGTGGGAAAAGGCGGCTCGGGACGAAAT
TCCGGTTTCATGATCGATGTTCCTCACGACCTGTCGTCTGGCGAATATTCAAGTGGCAGTACCGACGATACCCGCATCGA
AATGGCGCAGAACCGCACGGCGATTGCCTTTGCAACGCAAGCTGCGGCGGAATACGGAATGTCAAGCGAGACGTTCGATC
CGTCCGGCAAGATCAATGCGGCGGCAACCGAGCGCGGCATGAAGCTAAATGAGGATTTTGGCAAATCCCTGCTGAATGCG
GGCGAGAAGCACAGTTTCCTCGATGCGGCACAAATGCGGGAGATCACCGGAACCGATTTCTACCTCGGTGGCATTTACAC
GCCGGGGGCCGTGCTCATCCAGCCCGCCGACTATATCAGAAACTTCGCAGCCGGGCTTTGGCAGCAGGTCGATATCTTCG
AGCGCTCGCCTGTCACGTCCCTGATGCGGGAAAGCGGCCTATGGACAGCGTCTTCACCACGGGGCAGTGTCTCTGCACCC
AGGGTCATTCTGGGCGTCAACGGCCATATCAATGACTTCGGTCATTTCAACGGTCGCCTCATGCACTTCTTCGGATATGC
CTCAATGACGGCTCCGTTCCCGGCAGAGGATTTCGGGCGCAAGGCAAGCGGGCATGATCGATGGGCTCTGTTGCCTGCCG
ATCCCATGGGAGCAACGGTTCGGAAAATCACATCGAACGGCCAGTCGCGCATCGCTTTGCGGACCAAGTGGACCTATGAC
TTCAGCCTGAAGCTGACGGATCAGCGTCTGCGAAAAATGGCTCGGGAACATCGGGTGTCGCTGGACAGGCGTTTTCCCGC
ATTGAAGGACCTGCCGTTCGAACACTGCTGGGCAGGCCGCATCTGCCTCACCCGCAACCATGTGCCGGCCTTCGGCGAGA
TCGAAGAAGGGCTGTACTCGGCTTGCTGCGAAAACGGTCTTGGCACGGTGAAAAGCACGCTGGCTGGCATGCTGACAGCG
GAACTCGCCACCGGAAACACCTCGACACATCTTGAAGAATTCAACGATCACGCACAGCCGAGCAGGCTTCCACCGGAGCC
TTTCACATGGCTCGGCGCCAACACCGTGATCAAATGGCAGGAATTGCGTGCAGGCCGCGAGGGATAA

Upstream 100 bases:

>100_bases
TCGGTGGCCGCGACAAGTCAATCTTCGCGCATGACAATTATTGCGAACTGAAGACAATCTGGATCGATATTTCCGAGCGT
TCCGTGGATGAGACAATCCG

Downstream 100 bases:

>100_bases
AACGTCGCCGCGCAATGGGAGACCGCGCTTAAGCGCGAGGCTTCAACGATAATGGGAACGTAAAACTAGGAGCGAAAAAT
GAAGTTTCTGTGGAAGGCAC

Product: oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 448; Mature: 448

Protein sequence:

>448_residues
MNKISVKRLPVENGVSGWEAISTRSFPLRSLEGNVTADWLIVGAGFAGLSAARRLLQLRPDDKIVILDASEVGKGGSGRN
SGFMIDVPHDLSSGEYSSGSTDDTRIEMAQNRTAIAFATQAAAEYGMSSETFDPSGKINAAATERGMKLNEDFGKSLLNA
GEKHSFLDAAQMREITGTDFYLGGIYTPGAVLIQPADYIRNFAAGLWQQVDIFERSPVTSLMRESGLWTASSPRGSVSAP
RVILGVNGHINDFGHFNGRLMHFFGYASMTAPFPAEDFGRKASGHDRWALLPADPMGATVRKITSNGQSRIALRTKWTYD
FSLKLTDQRLRKMAREHRVSLDRRFPALKDLPFEHCWAGRICLTRNHVPAFGEIEEGLYSACCENGLGTVKSTLAGMLTA
ELATGNTSTHLEEFNDHAQPSRLPPEPFTWLGANTVIKWQELRAGREG

Sequences:

>Translated_448_residues
MNKISVKRLPVENGVSGWEAISTRSFPLRSLEGNVTADWLIVGAGFAGLSAARRLLQLRPDDKIVILDASEVGKGGSGRN
SGFMIDVPHDLSSGEYSSGSTDDTRIEMAQNRTAIAFATQAAAEYGMSSETFDPSGKINAAATERGMKLNEDFGKSLLNA
GEKHSFLDAAQMREITGTDFYLGGIYTPGAVLIQPADYIRNFAAGLWQQVDIFERSPVTSLMRESGLWTASSPRGSVSAP
RVILGVNGHINDFGHFNGRLMHFFGYASMTAPFPAEDFGRKASGHDRWALLPADPMGATVRKITSNGQSRIALRTKWTYD
FSLKLTDQRLRKMAREHRVSLDRRFPALKDLPFEHCWAGRICLTRNHVPAFGEIEEGLYSACCENGLGTVKSTLAGMLTA
ELATGNTSTHLEEFNDHAQPSRLPPEPFTWLGANTVIKWQELRAGREG
>Mature_448_residues
MNKISVKRLPVENGVSGWEAISTRSFPLRSLEGNVTADWLIVGAGFAGLSAARRLLQLRPDDKIVILDASEVGKGGSGRN
SGFMIDVPHDLSSGEYSSGSTDDTRIEMAQNRTAIAFATQAAAEYGMSSETFDPSGKINAAATERGMKLNEDFGKSLLNA
GEKHSFLDAAQMREITGTDFYLGGIYTPGAVLIQPADYIRNFAAGLWQQVDIFERSPVTSLMRESGLWTASSPRGSVSAP
RVILGVNGHINDFGHFNGRLMHFFGYASMTAPFPAEDFGRKASGHDRWALLPADPMGATVRKITSNGQSRIALRTKWTYD
FSLKLTDQRLRKMAREHRVSLDRRFPALKDLPFEHCWAGRICLTRNHVPAFGEIEEGLYSACCENGLGTVKSTLAGMLTA
ELATGNTSTHLEEFNDHAQPSRLPPEPFTWLGANTVIKWQELRAGREG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 49035; Mature: 49035

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKISVKRLPVENGVSGWEAISTRSFPLRSLEGNVTADWLIVGAGFAGLSAARRLLQLRP
CCCCEEEECCHHCCCCCHHHHCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
DDKIVILDASEVGKGGSGRNSGFMIDVPHDLSSGEYSSGSTDDTRIEMAQNRTAIAFATQ
CCCEEEEEHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEHH
AAAEYGMSSETFDPSGKINAAATERGMKLNEDFGKSLLNAGEKHSFLDAAQMREITGTDF
HHHHHCCCCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE
YLGGIYTPGAVLIQPADYIRNFAAGLWQQVDIFERSPVTSLMRESGLWTASSPRGSVSAP
EECCEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCCC
RVILGVNGHINDFGHFNGRLMHFFGYASMTAPFPAEDFGRKASGHDRWALLPADPMGATV
EEEEECCCCCCCCCCCCCEEEEEECHHHCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHH
RKITSNGQSRIALRTKWTYDFSLKLTDQRLRKMAREHRVSLDRRFPALKDLPFEHCWAGR
HHHHCCCCEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCC
ICLTRNHVPAFGEIEEGLYSACCENGLGTVKSTLAGMLTAELATGNTSTHLEEFNDHAQP
EEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
SRLPPEPFTWLGANTVIKWQELRAGREG
CCCCCCCCEECCCCCEEEEHHHCCCCCC
>Mature Secondary Structure
MNKISVKRLPVENGVSGWEAISTRSFPLRSLEGNVTADWLIVGAGFAGLSAARRLLQLRP
CCCCEEEECCHHCCCCCHHHHCCCCCCCHHCCCCCEEEEEEEECCHHHHHHHHHHHHCCC
DDKIVILDASEVGKGGSGRNSGFMIDVPHDLSSGEYSSGSTDDTRIEMAQNRTAIAFATQ
CCCEEEEEHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEHH
AAAEYGMSSETFDPSGKINAAATERGMKLNEDFGKSLLNAGEKHSFLDAAQMREITGTDF
HHHHHCCCCCCCCCCCCEEHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCE
YLGGIYTPGAVLIQPADYIRNFAAGLWQQVDIFERSPVTSLMRESGLWTASSPRGSVSAP
EECCEECCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEECCCCCCCCCCC
RVILGVNGHINDFGHFNGRLMHFFGYASMTAPFPAEDFGRKASGHDRWALLPADPMGATV
EEEEECCCCCCCCCCCCCEEEEEECHHHCCCCCCHHHHCCCCCCCCCEEEEECCCCCHHH
RKITSNGQSRIALRTKWTYDFSLKLTDQRLRKMAREHRVSLDRRFPALKDLPFEHCWAGR
HHHHCCCCEEEEEEEEEEEEEEEEECHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHCCCC
ICLTRNHVPAFGEIEEGLYSACCENGLGTVKSTLAGMLTAELATGNTSTHLEEFNDHAQP
EEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
SRLPPEPFTWLGANTVIKWQELRAGREG
CCCCCCCCEECCCCCEEEEHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]