| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is yxeK [H]
Identifier: 222102566
GI number: 222102566
Start: 166775
End: 168115
Strand: Reverse
Name: yxeK [H]
Synonym: Avi_7200
Alternate gene names: 222102566
Gene position: 168115-166775 (Counterclockwise)
Preceding gene: 222102567
Following gene: 222102565
Centisome position: 26.61
GC content: 58.54
Gene sequence:
>1341_bases ATGACCCGCCCATCGTCTCGCCGTCTGAAAACTCTGGTCGGAGCAGGCAATCTCACCGCCGCCGCCAATGATGCAAGCCC GCAGGCCGGAGCCAAGCGCGCCGCTGATCTTGCCCGTAAGGCAGAAGCCGAGAAAATCACCGGCCTGTTCACCGCCGATT TGTTGCAAACTGACCCGGCAGGATTGGCAGGCACCACCGGCACCAATGAGCCGATCATTCAGCTGGCAGCGCTCAGTCAG GTGACATCGCACATCGGCTTGATTGCCACCGTGTCCACCACCTTCCATCACCCCTATAATCTGGCCCGCCAGATTGGCAC GCTGGACCACGCCAGCGGTGGCCGTGCCGGATGGAATGCCGTGACATCCTCTGTTGGCGAGGAAAATTTTGGCGAAACAC TGGCAAGCCCGGAGGAGCGCTATGCACGGGCAGCCGAATTCATTGAAGTGGTCAACGCCCTCTACGATGCCAATGAGCGT GACGCCGCCACCCGCCGCAATTCCGGCAGTATTTCCATTGATCCCGCCAAATTTCACCCGATCAATTATCGCGGCCAGCA TTTTCAAGTCGAAGGGCCGCTGAATGTGCCGCCGCTGCCACAGGGCCGCCCGGTGCAGTTTCAGGCTGGGCAATCGGATG CTGGTGTCAATGTAGGTGCGCGCTATGCGGAAGTGGTCTATACCTCCCAGCCGAAGCTGGAGGATGCCATTGCCTTTGCG ACCGACCTTCGCAATCGGGCCAAGGGATTTGGGCGTGGGGATGATCTGCCCTTCATCATGAACTCCTTCCACTCGGTGAT CGGTGAAAGCGATGCCGATGTGGCGCGACGGGTGAAGGCAAAGCACGAGAAAATCGACTATGAGCAAGGCCGCCTGAAAC TGGCCGATATGCTCGGTGGCCATCTGGATCTATCCGATCTGCCGCTGGATAAGCCCCTGCCCGAAGTGCTTTTGCCGGAA GTGACTAGCATCAACCGCAGACGCGGACGGGTGGAGATTTTCCGCCGCTACGCCCGCGAAGGTTTGACGTTGCGGCAATT GATCATTCACGCGCAGGATACTGGCCATTGGTCGGTTGCTGGCACGCCGGAGCAATTGGCCGATGCAATTGAAGAACGGT TCCGGGCAGGTGTGCTGGATGTCATTTCCCTGCATGGCCTTGGCAACCCCGATCAGGAAGACCTGTTGCTGAACGGGCTT TTGCCAGAGCTTCGCCGCCGCGATCTGATCGATACCGATTATGTCGGGCATGATTTCCGCTCCAATCTGGAGCTGCCAGA GATTTCAAGGCAACAAACGGCACTTCAGGAAAGTCCGGTGCAAAAAGCTGTTTTCGGCTGA
Upstream 100 bases:
>100_bases CAGGTGGAAAACGTGTTTTCCACCCCACGCCACAGCTACACCCGCGCTCTTCTGGATGCCGTTCCCACACTTGCCTGACA ATACAAAAAAGGAGTTCCCC
Downstream 100 bases:
>100_bases CACAGCCAATGTCGGATTTTCGGTAAAAACGAAAATCCGACAACTGTTCGACAATTAGAATATATTACCTATGGATTTTA TCGAATATAACTAAACTCCC
Product: nitrilotriacetate monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 446; Mature: 445
Protein sequence:
>446_residues MTRPSSRRLKTLVGAGNLTAAANDASPQAGAKRAADLARKAEAEKITGLFTADLLQTDPAGLAGTTGTNEPIIQLAALSQ VTSHIGLIATVSTTFHHPYNLARQIGTLDHASGGRAGWNAVTSSVGEENFGETLASPEERYARAAEFIEVVNALYDANER DAATRRNSGSISIDPAKFHPINYRGQHFQVEGPLNVPPLPQGRPVQFQAGQSDAGVNVGARYAEVVYTSQPKLEDAIAFA TDLRNRAKGFGRGDDLPFIMNSFHSVIGESDADVARRVKAKHEKIDYEQGRLKLADMLGGHLDLSDLPLDKPLPEVLLPE VTSINRRRGRVEIFRRYAREGLTLRQLIIHAQDTGHWSVAGTPEQLADAIEERFRAGVLDVISLHGLGNPDQEDLLLNGL LPELRRRDLIDTDYVGHDFRSNLELPEISRQQTALQESPVQKAVFG
Sequences:
>Translated_446_residues MTRPSSRRLKTLVGAGNLTAAANDASPQAGAKRAADLARKAEAEKITGLFTADLLQTDPAGLAGTTGTNEPIIQLAALSQ VTSHIGLIATVSTTFHHPYNLARQIGTLDHASGGRAGWNAVTSSVGEENFGETLASPEERYARAAEFIEVVNALYDANER DAATRRNSGSISIDPAKFHPINYRGQHFQVEGPLNVPPLPQGRPVQFQAGQSDAGVNVGARYAEVVYTSQPKLEDAIAFA TDLRNRAKGFGRGDDLPFIMNSFHSVIGESDADVARRVKAKHEKIDYEQGRLKLADMLGGHLDLSDLPLDKPLPEVLLPE VTSINRRRGRVEIFRRYAREGLTLRQLIIHAQDTGHWSVAGTPEQLADAIEERFRAGVLDVISLHGLGNPDQEDLLLNGL LPELRRRDLIDTDYVGHDFRSNLELPEISRQQTALQESPVQKAVFG >Mature_445_residues TRPSSRRLKTLVGAGNLTAAANDASPQAGAKRAADLARKAEAEKITGLFTADLLQTDPAGLAGTTGTNEPIIQLAALSQV TSHIGLIATVSTTFHHPYNLARQIGTLDHASGGRAGWNAVTSSVGEENFGETLASPEERYARAAEFIEVVNALYDANERD AATRRNSGSISIDPAKFHPINYRGQHFQVEGPLNVPPLPQGRPVQFQAGQSDAGVNVGARYAEVVYTSQPKLEDAIAFAT DLRNRAKGFGRGDDLPFIMNSFHSVIGESDADVARRVKAKHEKIDYEQGRLKLADMLGGHLDLSDLPLDKPLPEVLLPEV TSINRRRGRVEIFRRYAREGLTLRQLIIHAQDTGHWSVAGTPEQLADAIEERFRAGVLDVISLHGLGNPDQEDLLLNGLL PELRRRDLIDTDYVGHDFRSNLELPEISRQQTALQESPVQKAVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ntaA/snaA/soxA(dszA) monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR016215 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: NA
Molecular weight: Translated: 48573; Mature: 48442
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPSSRRLKTLVGAGNLTAAANDASPQAGAKRAADLARKAEAEKITGLFTADLLQTDPA CCCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLAGTTGTNEPIIQLAALSQVTSHIGLIATVSTTFHHPYNLARQIGTLDHASGGRAGWNA CCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHCCHHHHHHHHCCCCCCCCCCCHHHH VTSSVGEENFGETLASPEERYARAAEFIEVVNALYDANERDAATRRNSGSISIDPAKFHP HHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCHHCCC INYRGQHFQVEGPLNVPPLPQGRPVQFQAGQSDAGVNVGARYAEVVYTSQPKLEDAIAFA CCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHEEECCCCCHHHHHHHH TDLRNRAKGFGRGDDLPFIMNSFHSVIGESDADVARRVKAKHEKIDYEQGRLKLADMLGG HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHCCC HLDLSDLPLDKPLPEVLLPEVTSINRRRGRVEIFRRYAREGLTLRQLIIHAQDTGHWSVA CCCCCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEECC GTPEQLADAIEERFRAGVLDVISLHGLGNPDQEDLLLNGLLPELRRRDLIDTDYVGHDFR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH SNLELPEISRQQTALQESPVQKAVFG CCCCCCCHHHHHHHHHHCCHHHHHCC >Mature Secondary Structure TRPSSRRLKTLVGAGNLTAAANDASPQAGAKRAADLARKAEAEKITGLFTADLLQTDPA CCCCHHHHHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC GLAGTTGTNEPIIQLAALSQVTSHIGLIATVSTTFHHPYNLARQIGTLDHASGGRAGWNA CCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHHHHCCHHHHHHHHCCCCCCCCCCCHHHH VTSSVGEENFGETLASPEERYARAAEFIEVVNALYDANERDAATRRNSGSISIDPAKFHP HHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEECCHHCCC INYRGQHFQVEGPLNVPPLPQGRPVQFQAGQSDAGVNVGARYAEVVYTSQPKLEDAIAFA CCCCCCEEEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCHHHHEEECCCCCHHHHHHHH TDLRNRAKGFGRGDDLPFIMNSFHSVIGESDADVARRVKAKHEKIDYEQGRLKLADMLGG HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHCCCHHHHHCCC HLDLSDLPLDKPLPEVLLPEVTSINRRRGRVEIFRRYAREGLTLRQLIIHAQDTGHWSVA CCCCCCCCCCCCCHHHHCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHCCCCCCEECC GTPEQLADAIEERFRAGVLDVISLHGLGNPDQEDLLLNGLLPELRRRDLIDTDYVGHDFR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHH SNLELPEISRQQTALQESPVQKAVFG CCCCCCCHHHHHHHHHHCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8867804; 9384377 [H]