| Definition | Agrobacterium vitis S4 plasmid pAtS4e, complete sequence. |
|---|---|
| Accession | NC_011981 |
| Length | 631,775 |
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The map label for this gene is tauA [H]
Identifier: 222102535
GI number: 222102535
Start: 131638
End: 132648
Strand: Direct
Name: tauA [H]
Synonym: Avi_7163
Alternate gene names: 222102535
Gene position: 131638-132648 (Clockwise)
Preceding gene: 222102534
Following gene: 222102536
Centisome position: 20.84
GC content: 54.8
Gene sequence:
>1011_bases ATGTCGCTTAAAAAACTCGTCACATTTGCATTGGCATCCGTTGGCATTGCCCTTGTCGCGCTTCCAACATTTGCTGCTGA CAAAAAGGTGGTTGTTGCCTATCAGACCGATGCGCTTCCGTCTTCGGTGGCGATTGCCAATGGCGAATTGGCCAAGGCAA CGGGCTATGACATCGATTTCCGCAAGTTTAATTCCGGCGCAGAAATTTTTGCAGCTATTGCCTCCGGCGATGTCCAGGTC GGTTATGTTGGCTCCAGCCCGTTTGCGGCTGCGACATCGCGTGGCCTTGATGTCAAGGCCTTCTATCTGGCATCGATTTC CGGAACGGATGAAGCGCTTGTGGTGCGCAATGGGTCCGGAATCAATTCTGTCAACGACCTGAAAGGCAAGAAGCTGGCGG CAGCGCCCGTGTCCACCGACCATTACCAGCTGTTGGCGCTGATCAAATCCTTGGGTTTGAGCGAAAAGGATGTGCAGGTG TTTGCCATCCCGCAGCCGGAAATTGTTGCCAGCTATAATCGCGGCGACATTGATGGCGGGTTTGTCTGGGACCCGGCGCT GACCGAACTCAGCAAGAATGGCAAGGTGCTGGTGACATCCAAGGATGTTGCAGAAAAGGGCGCTCCCACATTTTCCGCCT GGGTGGCCGCTGGAAAATTTGCCAAGGCCAATCCTGATTTTCTGAAAGCCTATGCGGGCGTGATCAACAAATATTACGCC TCCTTCGCCAAGGACAAGAGCGCATGGGGTGCCGATAGCGACAATGCCAAGCAGTTGGCCAAACTGCTGGGTGGCACAGC CGAACAACAGGCTGCCGCCTTGAAGAACCTCAACCTGCTGACACCTGAGGTGCAGGCTTCTGCTGCATGGTTGGGTGGCG GTGAGAATTCCGGTGCCGCCAAGATCCTCAAAGACACAGCACAATTTCTGAAGGCACAGGGCAAGATTGGCGATGTGCTG CCGAGCTATGCCGCATTTGTCACGCCAGAGGCGCTGCAAGTCACCAATTGA
Upstream 100 bases:
>100_bases AAAATATATATTTTCTATTCTTTAAGTATCCAATCCTTAAGATCGTCTGCATACAAGTGAACGGCATTTCGCCAGTTCTC GACTTGGAGGAAATCACAAA
Downstream 100 bases:
>100_bases TTGATTGTTAGAGGCTTTCATCCCGCTGGCACGATTGCCGGCGGGATTGTTTTTGAAAGAGAACCCCATGCTGCGGATTC AAAATGCCACGGTTTACTTT
Product: taurine ABC transporter periplasmic binding protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: Sulfate starvation-induced protein 1; SSI1 [H]
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSLKKLVTFALASVGIALVALPTFAADKKVVVAYQTDALPSSVAIANGELAKATGYDIDFRKFNSGAEIFAAIASGDVQV GYVGSSPFAAATSRGLDVKAFYLASISGTDEALVVRNGSGINSVNDLKGKKLAAAPVSTDHYQLLALIKSLGLSEKDVQV FAIPQPEIVASYNRGDIDGGFVWDPALTELSKNGKVLVTSKDVAEKGAPTFSAWVAAGKFAKANPDFLKAYAGVINKYYA SFAKDKSAWGADSDNAKQLAKLLGGTAEQQAAALKNLNLLTPEVQASAAWLGGGENSGAAKILKDTAQFLKAQGKIGDVL PSYAAFVTPEALQVTN
Sequences:
>Translated_336_residues MSLKKLVTFALASVGIALVALPTFAADKKVVVAYQTDALPSSVAIANGELAKATGYDIDFRKFNSGAEIFAAIASGDVQV GYVGSSPFAAATSRGLDVKAFYLASISGTDEALVVRNGSGINSVNDLKGKKLAAAPVSTDHYQLLALIKSLGLSEKDVQV FAIPQPEIVASYNRGDIDGGFVWDPALTELSKNGKVLVTSKDVAEKGAPTFSAWVAAGKFAKANPDFLKAYAGVINKYYA SFAKDKSAWGADSDNAKQLAKLLGGTAEQQAAALKNLNLLTPEVQASAAWLGGGENSGAAKILKDTAQFLKAQGKIGDVL PSYAAFVTPEALQVTN >Mature_335_residues SLKKLVTFALASVGIALVALPTFAADKKVVVAYQTDALPSSVAIANGELAKATGYDIDFRKFNSGAEIFAAIASGDVQVG YVGSSPFAAATSRGLDVKAFYLASISGTDEALVVRNGSGINSVNDLKGKKLAAAPVSTDHYQLLALIKSLGLSEKDVQVF AIPQPEIVASYNRGDIDGGFVWDPALTELSKNGKVLVTSKDVAEKGAPTFSAWVAAGKFAKANPDFLKAYAGVINKYYAS FAKDKSAWGADSDNAKQLAKLLGGTAEQQAAALKNLNLLTPEVQASAAWLGGGENSGAAKILKDTAQFLKAQGKIGDVLP SYAAFVTPEALQVTN
Specific function: Part of a binding-protein-dependent transport system for taurine [H]
COG id: COG4521
COG function: function code P; ABC-type taurine transport system, periplasmic component
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=304, Percent_Identity=41.4473684210526, Blast_Score=215, Evalue=3e-57, Organism=Escherichia coli, GI87081803, Length=235, Percent_Identity=25.1063829787234, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007210 - InterPro: IPR001638 - InterPro: IPR010068 [H]
Pfam domain/function: PF04069 OpuAC [H]
EC number: NA
Molecular weight: Translated: 34887; Mature: 34756
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKKLVTFALASVGIALVALPTFAADKKVVVAYQTDALPSSVAIANGELAKATGYDIDF CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCEEECCCCCCCH RKFNSGAEIFAAIASGDVQVGYVGSSPFAAATSRGLDVKAFYLASISGTDEALVVRNGSG HCCCCCHHEEEEEECCCEEEEEECCCCCHHHHCCCCEEEEEEEEEECCCCCEEEEECCCC INSVNDLKGKKLAAAPVSTDHYQLLALIKSLGLSEKDVQVFAIPQPEIVASYNRGDIDGG CCCHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCC FVWDPALTELSKNGKVLVTSKDVAEKGAPTFSAWVAAGKFAKANPDFLKAYAGVINKYYA EEECHHHHHHCCCCEEEEEECHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SFAKDKSAWGADSDNAKQLAKLLGGTAEQQAAALKNLNLLTPEVQASAAWLGGGENSGAA HHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCEEEECCCCCCCHH KILKDTAQFLKAQGKIGDVLPSYAAFVTPEALQVTN HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECC >Mature Secondary Structure SLKKLVTFALASVGIALVALPTFAADKKVVVAYQTDALPSSVAIANGELAKATGYDIDF CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEECCCEEECCCCCCCH RKFNSGAEIFAAIASGDVQVGYVGSSPFAAATSRGLDVKAFYLASISGTDEALVVRNGSG HCCCCCHHEEEEEECCCEEEEEECCCCCHHHHCCCCEEEEEEEEEECCCCCEEEEECCCC INSVNDLKGKKLAAAPVSTDHYQLLALIKSLGLSEKDVQVFAIPQPEIVASYNRGDIDGG CCCHHHCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEECCCCCCCCC FVWDPALTELSKNGKVLVTSKDVAEKGAPTFSAWVAAGKFAKANPDFLKAYAGVINKYYA EEECHHHHHHCCCCEEEEEECHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH SFAKDKSAWGADSDNAKQLAKLLGGTAEQQAAALKNLNLLTPEVQASAAWLGGGENSGAA HHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCEEEECCCCCCCHH KILKDTAQFLKAQGKIGDVLPSYAAFVTPEALQVTN HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 8774726 [H]