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The map label for this gene is yisB [H]

Identifier: 222102519

GI number: 222102519

Start: 114361

End: 114690

Strand: Direct

Name: yisB [H]

Synonym: Avi_7146

Alternate gene names: 222102519

Gene position: 114361-114690 (Clockwise)

Preceding gene: 222102517

Following gene: 222102521

Centisome position: 18.1

GC content: 58.18

Gene sequence:

>330_bases
ATGGCACGCAAAATCAGAGACAATTTCGCTTCGGACGATATGCAGGCGGAGCCGGTCATCTGCCCGCTGTGCGAGCGCGT
GATACCGGACGACCAAATGGAGGACCACCATCTGGTTCCCAAGAGCAAAGGCGGCAAGCTCAAGTTGCCCCTGCATCGCA
TATGCCATAGCCACATCCACAGGGTTTTCACCGACGCGCAGCTGGCGAAGAAGTTTTCCACGATCGCCGCTATTCTCGAG
GACCCCGCGATCCAGAAATTCGTGGCGTGGGTGAAAACCAAGCCACCCAGCTTCGAGGACGAGGCAGAGGAACGTACCCG
ACGTCGCTGA

Upstream 100 bases:

>100_bases
GTCGGGTGCGATTTCGCTGCGGCCTTTTTTTGTTGTCGACAGGTAGAGGATGATCTACCGAAGCCGAACGGACGAGGTCC
GACCGCCGACGGAGAGACAG

Downstream 100 bases:

>100_bases
AAATCTGCGACGGGACAGCGAGCAGGCAGCGTCGCCTTAACTTGAACAGGACGTCAGATGGCAGCGGCGGTCGACTTTAT
GTGGCGTGTGGCAGCGTGAT

Product: Restriction endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 109; Mature: 108

Protein sequence:

>109_residues
MARKIRDNFASDDMQAEPVICPLCERVIPDDQMEDHHLVPKSKGGKLKLPLHRICHSHIHRVFTDAQLAKKFSTIAAILE
DPAIQKFVAWVKTKPPSFEDEAEERTRRR

Sequences:

>Translated_109_residues
MARKIRDNFASDDMQAEPVICPLCERVIPDDQMEDHHLVPKSKGGKLKLPLHRICHSHIHRVFTDAQLAKKFSTIAAILE
DPAIQKFVAWVKTKPPSFEDEAEERTRRR
>Mature_108_residues
ARKIRDNFASDDMQAEPVICPLCERVIPDDQMEDHHLVPKSKGGKLKLPLHRICHSHIHRVFTDAQLAKKFSTIAAILED
PAIQKFVAWVKTKPPSFEDEAEERTRRR

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12583; Mature: 12451

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKIRDNFASDDMQAEPVICPLCERVIPDDQMEDHHLVPKSKGGKLKLPLHRICHSHIH
CCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHH
RVFTDAQLAKKFSTIAAILEDPAIQKFVAWVKTKPPSFEDEAEERTRRR
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHCCC
>Mature Secondary Structure 
ARKIRDNFASDDMQAEPVICPLCERVIPDDQMEDHHLVPKSKGGKLKLPLHRICHSHIH
CCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCHHHHHHHHHH
RVFTDAQLAKKFSTIAAILEDPAIQKFVAWVKTKPPSFEDEAEERTRRR
HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9384377 [H]