Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102475

Identifier: 222102475

GI number: 222102475

Start: 72799

End: 73260

Strand: Direct

Name: 222102475

Synonym: Avi_7082

Alternate gene names: NA

Gene position: 72799-73260 (Clockwise)

Preceding gene: 222102474

Following gene: 222102476

Centisome position: 11.52

GC content: 58.01

Gene sequence:

>462_bases
ATGAGCGTTAAGCCTGTAGCAAACGGTCGGGACTTTCCCGATATTCTTGCGGGTGGCGTACTGATATTTCTGGGAGCGCT
TGGCCTTTGGGCCGGGCGCGACCTGACATACGGCACTCCGGCAATGATGGGCCCCGGTTTCCTTCCGAAGTCCCTCTGCG
CCATCATCGCGCTCATCGGCGTGATCGTCCTTATCAAGGCACTTTCCAAGCCGCATGAGTCACTGGATGCGGTTAACCCC
AAGCCGTTGCTTATTCTGGTCGCCGCCATCGCAGGATTTGCGTTTGCAGCCGAACGCTTCGGCTTTGTCGCTGCAACCAT
CTGGCTTCTGGTTGTGGGAAGCCTTGCCGATCCGGAATCGCGCTGGAAGGAGATTTTCATCTCGACCGCAGTGCTGACGA
CGCTCGGCGCGCTTCTCTTCGTTTACGGACTTGGCGTCCAGATGCCGATTTGGCCCTTCTGA

Upstream 100 bases:

>100_bases
TGCCACTGGCTTATCTCAGCGGTCCTGACTGGGAAAAGGAAATGCCAACGCGTCTCGCTCGCTTCCAGAAGATCTGGGAC
ACTACTCCTTGGGTGCAGCA

Downstream 100 bases:

>100_bases
CGACCTTTCCTGATTTGATCGGATTATTTCGATGGCTTTTCTCGACGTCCTTATGCTCGGATTCTCCGAGGCCCTGACAC
CAACCAACTTAATGTTTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSVKPVANGRDFPDILAGGVLIFLGALGLWAGRDLTYGTPAMMGPGFLPKSLCAIIALIGVIVLIKALSKPHESLDAVNP
KPLLILVAAIAGFAFAAERFGFVAATIWLLVVGSLADPESRWKEIFISTAVLTTLGALLFVYGLGVQMPIWPF

Sequences:

>Translated_153_residues
MSVKPVANGRDFPDILAGGVLIFLGALGLWAGRDLTYGTPAMMGPGFLPKSLCAIIALIGVIVLIKALSKPHESLDAVNP
KPLLILVAAIAGFAFAAERFGFVAATIWLLVVGSLADPESRWKEIFISTAVLTTLGALLFVYGLGVQMPIWPF
>Mature_152_residues
SVKPVANGRDFPDILAGGVLIFLGALGLWAGRDLTYGTPAMMGPGFLPKSLCAIIALIGVIVLIKALSKPHESLDAVNPK
PLLILVAAIAGFAFAAERFGFVAATIWLLVVGSLADPESRWKEIFISTAVLTTLGALLFVYGLGVQMPIWPF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16150; Mature: 16018

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: PS00237 G_PROTEIN_RECEP_F1_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKPVANGRDFPDILAGGVLIFLGALGLWAGRDLTYGTPAMMGPGFLPKSLCAIIALIG
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHH
VIVLIKALSKPHESLDAVNPKPLLILVAAIAGFAFAAERFGFVAATIWLLVVGSLADPES
HHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RWKEIFISTAVLTTLGALLFVYGLGVQMPIWPF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
SVKPVANGRDFPDILAGGVLIFLGALGLWAGRDLTYGTPAMMGPGFLPKSLCAIIALIG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHHHHHHHHHHHH
VIVLIKALSKPHESLDAVNPKPLLILVAAIAGFAFAAERFGFVAATIWLLVVGSLADPES
HHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
RWKEIFISTAVLTTLGALLFVYGLGVQMPIWPF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA