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The map label for this gene is vgrG

Identifier: 222102455

GI number: 222102455

Start: 49634

End: 51859

Strand: Reverse

Name: vgrG

Synonym: Avi_7056

Alternate gene names: NA

Gene position: 51859-49634 (Counterclockwise)

Preceding gene: 222102456

Following gene: 222102454

Centisome position: 8.21

GC content: 57.19

Gene sequence:

>2226_bases
ATGGACGACGTTCTGTCACCCGCCGATTTCATCCAGGCCAGCCGTGTGCTAAAATTATCCTCGCCCCTGGGTGAAGACCA
GTTGCTGCCTGAGCGGATGACGGTGGATGAAGGCGTCAATCGCCTGTTCGAAATCACTGTGTCAGTTCGGGCCAAACGCG
AGGCAGTCAAGCCTGAAGAACTGATCGGCAAGCTGGTAGATGTCTCCCTGGAAATCCGGCAGGGTGAACTGGACGGTGAT
GGCGTGCGCCGGCCGTTCAATGGACTGGTGACCAATCTGTCCGAGGGACCGCCGGTGACCCGCGGGCTTCGCTCCTACAC
ACTGACCATCCGCCCGCAATTGTGGCTGTTGTCGCGCCGCTCCGATTGCCGGATCTGGCAGAATATGACGGCCATCCAGG
TGATGGAAACCCTGTTTTCCGAGCATGGCATTCCGGCCCCCGCATATGCTCCTCTGCATAGAACGCCGCCGTCGCGGGAA
TATTCAACGCAGTGGAACGAGACCGATCTTGACTATCTGCTGCGCCGATTCGAACAAGAAGGGTTATTCTACTGGTTTGA
ACACGAGACAGGCGTTCACCGCCTGAAGGTCAGCGACAGTAAGGTAGCCTGGGGCTCGCCATCGGCTGCGGCAGAAGGCG
AACAGAATGTACGTCTTGCCCAGGGCTCGTCGGACCGCAACCACATCAACGAATGGATGCGGCAATTCTCCTATGTCCCT
GGCCAGCGTGCCGGTGCGGACTGGAATTTTGAGACGCCCAGCACTGTACCGCTGAATGTCACGCCGTCACTAATCCAGAT
GCCGGGCGCCAAGCAGCGCGAGCTTTACGAATATCCGGCCCGCATCTCCGATGTCAAAGAAGCCGAAGTGGCCGAAACCT
TTCGGATGCAGGCCGTGGAGGCTGATCATGAGAGGGTGACGGGCCAGTCCAATGTGCGCTTTCTGGAAGCCGGTCGCCGG
TTCACGCCCTATGAGGAACCGCATCCGGAACACAAATACGAAGAGCATGTGATTACCCGAATTGTGCATCGGGTGGTGGA
CCGATCCTATGAGACGGCCAGCAATGAGATGGAATATGCCAACGCATTCGAGGCCATTCCCTCACGCGTTCCACTAACGC
CGCACCGAGAGACCAAACGTCCGCGTATCGAGGGGACACAGGTGGCGATTGTCGCCGGACCATCGGGCGAGGAGATCCAC
ACGGATCAATACGGGCGATTAAAATTATGGTTCCCCTGGGATAGAAAAGCACAGAAGGACGGCAGTGATACCTGCTGGGT
GCGCGTCGCCCAGGCCTGGGGTGGTGGCACCTGGGGTGCGCAGGTTATTCCGCGGATTGGCATGGAAGTGATGGTGTCAT
TCGTGGATGGCGATCCGGACCGGCCATTGGTGATTGGCGTGGTGCCGAACCCGAAAAACCCGGTGCCTTATGAGCTGCCC
GCCAACAAGACCCGGATGGTGCTGCGCTCCAACACCCACAAGGGCAGCGGCTTCAACGAGATGACCTTCGAGGACGAGAA
CGGCCAGGAGAATATGTTCTTCCATGCCCAGAAGGATCAGACCATTAAGGTGTTGAATAATCGCGTCAAACGGGTTGATG
CTCATCAGGTCGAGAGTATCGGGCAGAATAAATCGATCGATGTCGGTCAGAATCATCAGGAAAAGATCGGCGGGTCTAAA
AATGTCACCGTTGGTGGAGGTGCAAGCTCTTCTCTGTTCGCCTCTCTTGCCAGTATCGCGGCGGCCGGTGGCATAGACAG
CAAGAACGGTTCGTCTGCTATCGGTCACGGTCTGTTGCAGGAATTCGCCGGGGCCATGGCTTCGGCGGGAGTAACGGCGG
AGGTTGCGTCTTTATCGGCGAATGCGGATGTCACCAATGCCGGCAATTTCAGAACGGCGGCCGGCACGGAGCAGGCATCG
ACGGGATCGACCCTTGGCGGACTGTTGGGCAAAATTCTGCCGATCAGCGGCATCGTCAACACGGTGATCGAAAAATTTCG
CTCCGACACCATTGGAATTGCCCGAACCGAACAGATCGGTCTCTACAAGAACACCACCGTCGGTCACACCATGACCATCA
ACGCTGGCGAGGAATTCATCATCAAATGTGGCGAATCCAAGCTGATGATGGACAAGGCTGGCAATGTGACGATCGTCGGC
ACGAAGTTCAATTTCGCCGCATCGGGACATGTCCAGATCAATGGCGAAGTCATCGATCTGAACTGA

Upstream 100 bases:

>100_bases
GATGTCGTGATTGCGACACTTCATGAGTGAATATTAGAATAGCCATTGCGTGGCCAGCAATACGATCTGTTGATTTTGAA
AACGACATTTGGGGGCTTCC

Downstream 100 bases:

>100_bases
GGGCGCGTGCATGCTGGGAAAAAATCTCACGCGTCTTGCTGCCATCGGTTTCGAGCAAGCCCATCGCGATGGCGAGGATA
TGGGCGTGATCGCGGTGCGA

Product: vgrG protein

Products: NA

Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; Vgr-Related Protein; RHS Accessory Genetic Element; Two Component LuxR Family Transcriptional Regulator; Conserved Hypothethical Protein; Rhs Element Vgr Family; Rhs Element Vgr ProteinGp5-Like; VgrG-Like Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein; Rhs Protein; Rhs/Vgr-Family Protein; Fimbrial Operon Related Protein; Vgr Protein; VgrG Family T6SS G; Vgr Family Type VI Secretion System

Number of amino acids: Translated: 741; Mature: 741

Protein sequence:

>741_residues
MDDVLSPADFIQASRVLKLSSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEELIGKLVDVSLEIRQGELDGD
GVRRPFNGLVTNLSEGPPVTRGLRSYTLTIRPQLWLLSRRSDCRIWQNMTAIQVMETLFSEHGIPAPAYAPLHRTPPSRE
YSTQWNETDLDYLLRRFEQEGLFYWFEHETGVHRLKVSDSKVAWGSPSAAAEGEQNVRLAQGSSDRNHINEWMRQFSYVP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDVKEAEVAETFRMQAVEADHERVTGQSNVRFLEAGRR
FTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYANAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIH
TDQYGRLKLWFPWDRKAQKDGSDTCWVRVAQAWGGGTWGAQVIPRIGMEVMVSFVDGDPDRPLVIGVVPNPKNPVPYELP
ANKTRMVLRSNTHKGSGFNEMTFEDENGQENMFFHAQKDQTIKVLNNRVKRVDAHQVESIGQNKSIDVGQNHQEKIGGSK
NVTVGGGASSSLFASLASIAAAGGIDSKNGSSAIGHGLLQEFAGAMASAGVTAEVASLSANADVTNAGNFRTAAGTEQAS
TGSTLGGLLGKILPISGIVNTVIEKFRSDTIGIARTEQIGLYKNTTVGHTMTINAGEEFIIKCGESKLMMDKAGNVTIVG
TKFNFAASGHVQINGEVIDLN

Sequences:

>Translated_741_residues
MDDVLSPADFIQASRVLKLSSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEELIGKLVDVSLEIRQGELDGD
GVRRPFNGLVTNLSEGPPVTRGLRSYTLTIRPQLWLLSRRSDCRIWQNMTAIQVMETLFSEHGIPAPAYAPLHRTPPSRE
YSTQWNETDLDYLLRRFEQEGLFYWFEHETGVHRLKVSDSKVAWGSPSAAAEGEQNVRLAQGSSDRNHINEWMRQFSYVP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDVKEAEVAETFRMQAVEADHERVTGQSNVRFLEAGRR
FTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYANAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIH
TDQYGRLKLWFPWDRKAQKDGSDTCWVRVAQAWGGGTWGAQVIPRIGMEVMVSFVDGDPDRPLVIGVVPNPKNPVPYELP
ANKTRMVLRSNTHKGSGFNEMTFEDENGQENMFFHAQKDQTIKVLNNRVKRVDAHQVESIGQNKSIDVGQNHQEKIGGSK
NVTVGGGASSSLFASLASIAAAGGIDSKNGSSAIGHGLLQEFAGAMASAGVTAEVASLSANADVTNAGNFRTAAGTEQAS
TGSTLGGLLGKILPISGIVNTVIEKFRSDTIGIARTEQIGLYKNTTVGHTMTINAGEEFIIKCGESKLMMDKAGNVTIVG
TKFNFAASGHVQINGEVIDLN
>Mature_741_residues
MDDVLSPADFIQASRVLKLSSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEELIGKLVDVSLEIRQGELDGD
GVRRPFNGLVTNLSEGPPVTRGLRSYTLTIRPQLWLLSRRSDCRIWQNMTAIQVMETLFSEHGIPAPAYAPLHRTPPSRE
YSTQWNETDLDYLLRRFEQEGLFYWFEHETGVHRLKVSDSKVAWGSPSAAAEGEQNVRLAQGSSDRNHINEWMRQFSYVP
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDVKEAEVAETFRMQAVEADHERVTGQSNVRFLEAGRR
FTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYANAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIH
TDQYGRLKLWFPWDRKAQKDGSDTCWVRVAQAWGGGTWGAQVIPRIGMEVMVSFVDGDPDRPLVIGVVPNPKNPVPYELP
ANKTRMVLRSNTHKGSGFNEMTFEDENGQENMFFHAQKDQTIKVLNNRVKRVDAHQVESIGQNKSIDVGQNHQEKIGGSK
NVTVGGGASSSLFASLASIAAAGGIDSKNGSSAIGHGLLQEFAGAMASAGVTAEVASLSANADVTNAGNFRTAAGTEQAS
TGSTLGGLLGKILPISGIVNTVIEKFRSDTIGIARTEQIGLYKNTTVGHTMTINAGEEFIIKCGESKLMMDKAGNVTIVG
TKFNFAASGHVQINGEVIDLN

Specific function: Unknown

COG id: COG3501

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 81715; Mature: 81715

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDVLSPADFIQASRVLKLSSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEE
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHCCCHHH
LIGKLVDVSLEIRQGELDGDGVRRPFNGLVTNLSEGPPVTRGLRSYTLTIRPQLWLLSRR
HHHHHHCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHCCEEEEEEECCEEEEECCC
SDCRIWQNMTAIQVMETLFSEHGIPAPAYAPLHRTPPSREYSTQWNETDLDYLLRRFEQE
CCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GLFYWFEHETGVHRLKVSDSKVAWGSPSAAAEGEQNVRLAQGSSDRNHINEWMRQFSYVP
CCEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDVKEAEVAETFRMQAVE
CCCCCCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
ADHERVTGQSNVRFLEAGRRFTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYA
CHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHH
NAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIHTDQYGRLKLWFPWDRKAQKD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
GSDTCWVRVAQAWGGGTWGAQVIPRIGMEVMVSFVDGDPDRPLVIGVVPNPKNPVPYELP
CCCEEEEEEEECCCCCCCHHHHHHHCCHHHEEEECCCCCCCCEEEEECCCCCCCCCEECC
ANKTRMVLRSNTHKGSGFNEMTFEDENGQENMFFHAQKDQTIKVLNNRVKRVDAHQVESI
CCCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
GQNKSIDVGQNHQEKIGGSKNVTVGGGASSSLFASLASIAAAGGIDSKNGSSAIGHGLLQ
CCCCCCCCCCCHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
EFAGAMASAGVTAEVASLSANADVTNAGNFRTAAGTEQASTGSTLGGLLGKILPISGIVN
HHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
TVIEKFRSDTIGIARTEQIGLYKNTTVGHTMTINAGEEFIIKCGESKLMMDKAGNVTIVG
HHHHHHCCCCCCEEEEEECCCEECCCCCEEEEECCCCEEEEEECCCEEEEECCCCEEEEE
TKFNFAASGHVQINGEVIDLN
EEEEEEECCEEEECCEEEECC
>Mature Secondary Structure
MDDVLSPADFIQASRVLKLSSPLGEDQLLPERMTVDEGVNRLFEITVSVRAKREAVKPEE
CCCCCCHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHCCCHHH
LIGKLVDVSLEIRQGELDGDGVRRPFNGLVTNLSEGPPVTRGLRSYTLTIRPQLWLLSRR
HHHHHHCEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCHHHCCEEEEEEECCEEEEECCC
SDCRIWQNMTAIQVMETLFSEHGIPAPAYAPLHRTPPSREYSTQWNETDLDYLLRRFEQE
CCCHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
GLFYWFEHETGVHRLKVSDSKVAWGSPSAAAEGEQNVRLAQGSSDRNHINEWMRQFSYVP
CCEEEEECCCCEEEEEECCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCC
GQRAGADWNFETPSTVPLNVTPSLIQMPGAKQRELYEYPARISDVKEAEVAETFRMQAVE
CCCCCCCCCCCCCCEEEECCCHHHHHCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHH
ADHERVTGQSNVRFLEAGRRFTPYEEPHPEHKYEEHVITRIVHRVVDRSYETASNEMEYA
CHHHHCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCHHHHH
NAFEAIPSRVPLTPHRETKRPRIEGTQVAIVAGPSGEEIHTDQYGRLKLWFPWDRKAQKD
HHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCCCCC
GSDTCWVRVAQAWGGGTWGAQVIPRIGMEVMVSFVDGDPDRPLVIGVVPNPKNPVPYELP
CCCEEEEEEEECCCCCCCHHHHHHHCCHHHEEEECCCCCCCCEEEEECCCCCCCCCEECC
ANKTRMVLRSNTHKGSGFNEMTFEDENGQENMFFHAQKDQTIKVLNNRVKRVDAHQVESI
CCCEEEEEECCCCCCCCCCCCEEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHC
GQNKSIDVGQNHQEKIGGSKNVTVGGGASSSLFASLASIAAAGGIDSKNGSSAIGHGLLQ
CCCCCCCCCCCHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
EFAGAMASAGVTAEVASLSANADVTNAGNFRTAAGTEQASTGSTLGGLLGKILPISGIVN
HHHHHHHHCCCCHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
TVIEKFRSDTIGIARTEQIGLYKNTTVGHTMTINAGEEFIIKCGESKLMMDKAGNVTIVG
HHHHHHCCCCCCEEEEEECCCEECCCCCEEEEECCCCEEEEEECCCEEEEECCCCEEEEE
TKFNFAASGHVQINGEVIDLN
EEEEEEECCEEEECCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA