Definition Agrobacterium vitis S4 plasmid pAtS4e, complete sequence.
Accession NC_011981
Length 631,775

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The map label for this gene is 222102416

Identifier: 222102416

GI number: 222102416

Start: 4003

End: 5256

Strand: Reverse

Name: 222102416

Synonym: Avi_7004

Alternate gene names: NA

Gene position: 5256-4003 (Counterclockwise)

Preceding gene: 222102418

Following gene: NA

Centisome position: 0.83

GC content: 55.74

Gene sequence:

>1254_bases
ATGCCTGTCGAAAAAATACATGCACTCGTCGTCGGCGGTGGCCAGGCGGGCATCGCGATGAGTGAGCATCTGACCAGGAA
CAATGTGGCACACCTTGTCCTTGAAAAAGGAAGGATAGCAGAGCGCTGGCGTTCCATGCGTTGGGATTCTCTGGTCGCCA
ATGGTCCGGCTTGGCACGATCGTTTTCCAAACCTGACCTTTCCCGGCAATGCCGATGCGTTTGTTCCCAAAGAAGGCGTT
GCTGACTATTTTGAGACCTATGCAAAAAAGTACAACGCACCAATACGCAGTGGAACCGAGGTAACTCACGTCGAGCGTCT
AGGCGGTCGCCCGGGTTTCCGTGTGGAGACAGCTAACGGAGTGATCGAAGCACGCTACGTCGTTGTGGCGACCGGTCCGT
TCCAGTTGCCGAATATCCCGCCAATCGTTCCGCCGACCGCCAATATCAACCAGATACATTCCAGCGAATACCGCAATCCT
CACCAGCTCGGGGAGGGGGCCGTTCTCGTGATTGGCGCTGGCTCGTCGGGAGTGCAGATTGCGGAGGAACTCATGCGAGT
GGGCCGCAAAACTTATCTTTCGGTTGGTCCGCATGATCGTCCTCCACGCACCTATCGCGGGTATGACTGCGCCTGGTGGC
TTGGTGTTCTCGGCAAATGGGATGCCCAGGTGCAGGAATTGCAGACAAGCAACCATGTTACGGTCGCTGTCAGTGGTGCG
CGAGGCGGAGAAACTATCGACTTCCGTCGGCTTGCAGCACAAGGAATGGTTCTGGTTGGCATGACCGAAAATTTTAAGAA
CGGCAAATTATCCTTCGCTGAAGACCTTGCCAACAATCTCGATCGTGGTGACCAGACCTATCTATCACTGCTCGACGAGG
CGGATGCTTTCGTTGCATTGAACGGTCTCAACCTTCCGCAAGAGCCGGAAGCCCGCATTCTTGGTCCAACGGCCGATTGT
ATTACTAATCCGATTCTCGAACTGGATCTTACCGCGGCAGGCATCACCACCATCATCTGGGCCACCGGTTTCAGGTCCGA
CTATAGCTGGTTGAAAGTGAAGGCCTTCGACGAAGCGGGGCGCCCTAGACATCATCGAGGCGTCTCTTCTGAGAGAGGCC
TCTACTTCCTCGGTCTTCCCGGACTTTCCGGGCGCGCCTCGAGTTTCATCTGGGGCGTCTGGCATGATGCCAAGCACTTG
GCCGATCACATCACCATTCAGGATAACTACCTGGGGTGTATGCCGCAGGCCTGA

Upstream 100 bases:

>100_bases
CACAGCAATAAAAATTCTCGTTGGCCCTGCCCCTATTCTTCGGCTTTCGGCAACACCCCAGGGGCCAGCACACACTTCAA
TTTATAGAAAGGACGAAACA

Downstream 100 bases:

>100_bases
TCTTATTTTGACGTCTTACCCGGCCGCCAGAATAGTGGTGTGGATGTATCCGGATTAGAGATACCGCAAACAATCTGCAC
TCTTTTTCTATTATGATGAT

Product: Flavin-containing monooxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPVEKIHALVVGGGQAGIAMSEHLTRNNVAHLVLEKGRIAERWRSMRWDSLVANGPAWHDRFPNLTFPGNADAFVPKEGV
ADYFETYAKKYNAPIRSGTEVTHVERLGGRPGFRVETANGVIEARYVVVATGPFQLPNIPPIVPPTANINQIHSSEYRNP
HQLGEGAVLVIGAGSSGVQIAEELMRVGRKTYLSVGPHDRPPRTYRGYDCAWWLGVLGKWDAQVQELQTSNHVTVAVSGA
RGGETIDFRRLAAQGMVLVGMTENFKNGKLSFAEDLANNLDRGDQTYLSLLDEADAFVALNGLNLPQEPEARILGPTADC
ITNPILELDLTAAGITTIIWATGFRSDYSWLKVKAFDEAGRPRHHRGVSSERGLYFLGLPGLSGRASSFIWGVWHDAKHL
ADHITIQDNYLGCMPQA

Sequences:

>Translated_417_residues
MPVEKIHALVVGGGQAGIAMSEHLTRNNVAHLVLEKGRIAERWRSMRWDSLVANGPAWHDRFPNLTFPGNADAFVPKEGV
ADYFETYAKKYNAPIRSGTEVTHVERLGGRPGFRVETANGVIEARYVVVATGPFQLPNIPPIVPPTANINQIHSSEYRNP
HQLGEGAVLVIGAGSSGVQIAEELMRVGRKTYLSVGPHDRPPRTYRGYDCAWWLGVLGKWDAQVQELQTSNHVTVAVSGA
RGGETIDFRRLAAQGMVLVGMTENFKNGKLSFAEDLANNLDRGDQTYLSLLDEADAFVALNGLNLPQEPEARILGPTADC
ITNPILELDLTAAGITTIIWATGFRSDYSWLKVKAFDEAGRPRHHRGVSSERGLYFLGLPGLSGRASSFIWGVWHDAKHL
ADHITIQDNYLGCMPQA
>Mature_416_residues
PVEKIHALVVGGGQAGIAMSEHLTRNNVAHLVLEKGRIAERWRSMRWDSLVANGPAWHDRFPNLTFPGNADAFVPKEGVA
DYFETYAKKYNAPIRSGTEVTHVERLGGRPGFRVETANGVIEARYVVVATGPFQLPNIPPIVPPTANINQIHSSEYRNPH
QLGEGAVLVIGAGSSGVQIAEELMRVGRKTYLSVGPHDRPPRTYRGYDCAWWLGVLGKWDAQVQELQTSNHVTVAVSGAR
GGETIDFRRLAAQGMVLVGMTENFKNGKLSFAEDLANNLDRGDQTYLSLLDEADAFVALNGLNLPQEPEARILGPTADCI
TNPILELDLTAAGITTIIWATGFRSDYSWLKVKAFDEAGRPRHHRGVSSERGLYFLGLPGLSGRASSFIWGVWHDAKHLA
DHITIQDNYLGCMPQA

Specific function: Unknown

COG id: COG2072

COG function: function code P; Predicted flavoprotein involved in K+ transport

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013027
- InterPro:   IPR000103 [H]

Pfam domain/function: PF07992 Pyr_redox_2 [H]

EC number: NA

Molecular weight: Translated: 45706; Mature: 45575

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVEKIHALVVGGGQAGIAMSEHLTRNNVAHLVLEKGRIAERWRSMRWDSLVANGPAWHD
CCHHHEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHCCHHHHHCCCCCHHC
RFPNLTFPGNADAFVPKEGVADYFETYAKKYNAPIRSGTEVTHVERLGGRPGFRVETANG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCC
VIEARYVVVATGPFQLPNIPPIVPPTANINQIHSSEYRNPHQLGEGAVLVIGAGSSGVQI
EEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCEEEEEECCCCCHHH
AEELMRVGRKTYLSVGPHDRPPRTYRGYDCAWWLGVLGKWDAQVQELQTSNHVTVAVSGA
HHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEEECC
RGGETIDFRRLAAQGMVLVGMTENFKNGKLSFAEDLANNLDRGDQTYLSLLDEADAFVAL
CCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
NGLNLPQEPEARILGPTADCITNPILELDLTAAGITTIIWATGFRSDYSWLKVKAFDEAG
ECCCCCCCCCCEEECCCHHHHCCCCEEEEECHHHHEEEEEECCCCCCCCEEEEEEECCCC
RPRHHRGVSSERGLYFLGLPGLSGRASSFIWGVWHDAKHLADHITIQDNYLGCMPQA
CCHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHEEEEECCCCCCCCCC
>Mature Secondary Structure 
PVEKIHALVVGGGQAGIAMSEHLTRNNVAHLVLEKGRIAERWRSMRWDSLVANGPAWHD
CHHHEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCHHHHHHHHCCHHHHHCCCCCHHC
RFPNLTFPGNADAFVPKEGVADYFETYAKKYNAPIRSGTEVTHVERLGGRPGFRVETANG
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEECCCC
VIEARYVVVATGPFQLPNIPPIVPPTANINQIHSSEYRNPHQLGEGAVLVIGAGSSGVQI
EEEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCEEEEEECCCCCHHH
AEELMRVGRKTYLSVGPHDRPPRTYRGYDCAWWLGVLGKWDAQVQELQTSNHVTVAVSGA
HHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCEEEEEECC
RGGETIDFRRLAAQGMVLVGMTENFKNGKLSFAEDLANNLDRGDQTYLSLLDEADAFVAL
CCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCEEEEE
NGLNLPQEPEARILGPTADCITNPILELDLTAAGITTIIWATGFRSDYSWLKVKAFDEAG
ECCCCCCCCCCEEECCCHHHHCCCCEEEEECHHHHEEEEEECCCCCCCCEEEEEEECCCC
RPRHHRGVSSERGLYFLGLPGLSGRASSFIWGVWHDAKHLADHITIQDNYLGCMPQA
CCHHHCCCCCCCCEEEEECCCCCCCCCCEEEEEHHHHHHHHHEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA