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The map label for this gene is recA [H]

Identifier: 222097225

GI number: 222097225

Start: 3522315

End: 3522710

Strand: Reverse

Name: recA [H]

Synonym: BCQ_3565

Alternate gene names: 222097225

Gene position: 3522710-3522315 (Counterclockwise)

Preceding gene: 222097226

Following gene: 222097224

Centisome position: 67.56

GC content: 39.14

Gene sequence:

>396_bases
GTGCCAGAAACAACTCCAGGTGGTCGTGCGTTGAAATTCTATTCAACTGTTCGTCTTGAAGTACGTCGTGCGGAGCAATT
AAAACAAGGTAACGACATTGTTGGTAATAAAACAAAAGTAAAAGTAGTTAAAAATAAAGTGGCACCACCATTCCGTGTTG
CGGAAGTTGATATTATGTACGGAGAAGGTATTTCAAGAGAAGGTGAAATCTTAGATATGGCTTCTGAACTTGATATCGTT
CAAAAGAGCGGTGCTTGGTACTCTTATAATGAAGAACGCTTAGGGCAAGGTCGTGAAAATTCGAAGCAGTTCTTAAAAGA
AAATACGGATTTAAGAGAAGAAATTGCCTTCTTTATTCGTGAGCATCACGGAATTAGCGAAGAATTCAGGTGCTGA

Upstream 100 bases:

>100_bases
GTAGGGTACGGCAGATGATAGGCTACTGCTGGAAGTGCAAGGCTCTCTGTAAAGAGATGAAGAGATAGTCCGGACTATAG
AGATGGAAAATCTATAGATA

Downstream 100 bases:

>100_bases
AGATATGGAAGATCCAAGTCTTCTTGATTAAAGTGGGATAAAAGACACGGCTTCGTGTCTTTTATTTTTGTATCATTATG
AAAGCGTTGTATATCGTTGG

Product: reca protein (recombinase a), c-terminal region

Products: NA

Alternate protein names: Recombinase A [H]

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIV
QKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFIREHHGISEEFRC

Sequences:

>Translated_131_residues
MPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIV
QKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFIREHHGISEEFRC
>Mature_130_residues
PETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMYGEGISREGEILDMASELDIVQ
KSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFIREHHGISEEFRC

Specific function: Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with lexA causing its activation

COG id: COG0468

COG function: function code L; RecA/RadA recombinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recA family [H]

Homologues:

Organism=Escherichia coli, GI1789051, Length=120, Percent_Identity=50.8333333333333, Blast_Score=135, Evalue=7e-34,

Paralogues:

None

Copy number: 1548 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800-1200 (L-broth) 40,000-60,000 (L-broth + Nalidixate) 4,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013765
- InterPro:   IPR020584
- InterPro:   IPR020588
- InterPro:   IPR020587 [H]

Pfam domain/function: PF00154 RecA [H]

EC number: NA

Molecular weight: Translated: 15037; Mature: 14906

Theoretical pI: Translated: 6.55; Mature: 6.55

Prosite motif: PS00321 RECA_1 ; PS50163 RECA_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMY
CCCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEE
GEGISREGEILDMASELDIVQKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFIR
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHCCCCHHHHHHHHHH
EHHGISEEFRC
HHCCCCCCCCC
>Mature Secondary Structure 
PETTPGGRALKFYSTVRLEVRRAEQLKQGNDIVGNKTKVKVVKNKVAPPFRVAEVDIMY
CCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEE
GEGISREGEILDMASELDIVQKSGAWYSYNEERLGQGRENSKQFLKENTDLREEIAFFIR
CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHCCCCHHHHHHHHHH
EHHGISEEFRC
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA