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The map label for this gene is ccdC

Identifier: 222097105

GI number: 222097105

Start: 3391063

End: 3391551

Strand: Reverse

Name: ccdC

Synonym: BCQ_3445

Alternate gene names: NA

Gene position: 3391551-3391063 (Counterclockwise)

Preceding gene: 222097106

Following gene: 222097104

Centisome position: 65.04

GC content: 33.95

Gene sequence:

>489_bases
TTGCAGCAAGGTTCGTACAGTATTACAATTTTTTTACTCGTCATAGGGCTCGTTATATTTAGACGTATGCGTTCTATGAA
TCGACCAATTAAAAATAAAGGAAGACGACTATTATTGCCATTATTCTTTTTATTACCAGGTTTTTCTTTATATGCTGCAC
CGATACAACTTGCTGGTTGGCAAATTGGGATAGCTGCTGGGATTGGACTGTTATTGTCAATTCCACTTATTATTTTAAGT
GGGTATGAAGTGAGAGAAGATGGTCAAATTTATGCGAAAAAAAGTATTGCTTTTATTGCTACATTTTTAGTTATCGTTCT
TTTACGTACTTATTTTAGAAGACATTTACAAGGTTTAGATCCAAAGTCAATCGGCATTCTTTTCTACACCCTTGCGGTTT
GTTATATAGTACCTTGGCGTATTGGCTGCTATATAAAATTTCGTAAAGTTTACGTAGAGAAAGAGAAAATTACGATGCCA
ATAAGCTAA

Upstream 100 bases:

>100_bases
AATGTAAGATTTTTCGAAGGGATAATTATATTATTTAGGAAATATTAGGAGTATAATGGGAAAAGATTTTAAAAATGACT
ATTTTTAGGGAGAGATTCAC

Downstream 100 bases:

>100_bases
AAGCCATGCATTTGTATGGCTTTTTCTTTTGAAAATTTGTCGGATAAATAAATGAAAATAAGAAGTGGAAAAGCGTTTTT
TGTTTTCTGAATATTTTTAC

Product: ccdc protein

Products: NA

Alternate protein names: Ccdc Protein

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MQQGSYSITIFLLVIGLVIFRRMRSMNRPIKNKGRRLLLPLFFLLPGFSLYAAPIQLAGWQIGIAAGIGLLLSIPLIILS
GYEVREDGQIYAKKSIAFIATFLVIVLLRTYFRRHLQGLDPKSIGILFYTLAVCYIVPWRIGCYIKFRKVYVEKEKITMP
IS

Sequences:

>Translated_162_residues
MQQGSYSITIFLLVIGLVIFRRMRSMNRPIKNKGRRLLLPLFFLLPGFSLYAAPIQLAGWQIGIAAGIGLLLSIPLIILS
GYEVREDGQIYAKKSIAFIATFLVIVLLRTYFRRHLQGLDPKSIGILFYTLAVCYIVPWRIGCYIKFRKVYVEKEKITMP
IS
>Mature_162_residues
MQQGSYSITIFLLVIGLVIFRRMRSMNRPIKNKGRRLLLPLFFLLPGFSLYAAPIQLAGWQIGIAAGIGLLLSIPLIILS
GYEVREDGQIYAKKSIAFIATFLVIVLLRTYFRRHLQGLDPKSIGILFYTLAVCYIVPWRIGCYIKFRKVYVEKEKITMP
IS

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18516; Mature: 18516

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQGSYSITIFLLVIGLVIFRRMRSMNRPIKNKGRRLLLPLFFLLPGFSLYAAPIQLAGW
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCC
QIGIAAGIGLLLSIPLIILSGYEVREDGQIYAKKSIAFIATFLVIVLLRTYFRRHLQGLD
HHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKSIGILFYTLAVCYIVPWRIGCYIKFRKVYVEKEKITMPIS
CHHHHHHHHHHHHHHHHHHHHHHEEEHHHHEEEHHHEECCCC
>Mature Secondary Structure
MQQGSYSITIFLLVIGLVIFRRMRSMNRPIKNKGRRLLLPLFFLLPGFSLYAAPIQLAGW
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHHHHHHCCHHHHHHHHHHCCC
QIGIAAGIGLLLSIPLIILSGYEVREDGQIYAKKSIAFIATFLVIVLLRTYFRRHLQGLD
HHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PKSIGILFYTLAVCYIVPWRIGCYIKFRKVYVEKEKITMPIS
CHHHHHHHHHHHHHHHHHHHHHHEEEHHHHEEEHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA