Click here to switch to the map view.

The map label for this gene is ysdA [H]

Identifier: 222097014

GI number: 222097014

Start: 3299944

End: 3300192

Strand: Reverse

Name: ysdA [H]

Synonym: BCQ_3354

Alternate gene names: 222097014

Gene position: 3300192-3299944 (Counterclockwise)

Preceding gene: 222097015

Following gene: 222097013

Centisome position: 63.29

GC content: 34.94

Gene sequence:

>249_bases
ATGAAATGGATTTATTTTATTATGATTAACGTTATAGCTTTTAGCCTTATGGGGCTTGATAAACGAAAAGCGAAGAAGAA
ACAGTGGAGAACGCCAGAAAGTACGTTGTTTTTATCAGCAGCAGCTGGGGGAGCAGTTGGAGCTTGGATTGGTATGTATA
TGTTTCATCATAAAACTCATAAAAAGAAATTTGTTTTCGGCATACCGTTACTTGTTGTAATAACGGTATGTTTATTATTC
GTTGTATGA

Upstream 100 bases:

>100_bases
GTAAATATGAAGGTAACGAATTAATAAAAAGTGTTCTTCAGTTGTTTCCATCGTTTTTTCATGTTACCATTAAGCGAATT
TTTCATAGGGAGAGAAAGCG

Downstream 100 bases:

>100_bases
GAAATGTCGAAAGAAATGCAGATTGATTATTGGTAAAGTGAGCACGTGGGAACGTATAATGGAGAAAAAATGAGAAGAGG
AGAAAAAGGAAGATGGGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKWIYFIMINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTHKKKFVFGIPLLVVITVCLLF
VV

Sequences:

>Translated_82_residues
MKWIYFIMINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTHKKKFVFGIPLLVVITVCLLF
VV
>Mature_82_residues
MKWIYFIMINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTHKKKFVFGIPLLVVITVCLLF
VV

Specific function: Unknown

COG id: COG3326

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010718 [H]

Pfam domain/function: PF06961 DUF1294 [H]

EC number: NA

Molecular weight: Translated: 9375; Mature: 9375

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
6.1 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWIYFIMINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHC
KKKFVFGIPLLVVITVCLLFVV
CCHHHCCCHHHHHHHHHHHHHC
>Mature Secondary Structure
MKWIYFIMINVIAFSLMGLDKRKAKKKQWRTPESTLFLSAAAGGAVGAWIGMYMFHHKTH
CHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHEEEECCCCCHHHHHHHHHHHHHHHC
KKKFVFGIPLLVVITVCLLFVV
CCHHHCCCHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]