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The map label for this gene is yxeN [H]

Identifier: 222096983

GI number: 222096983

Start: 3265874

End: 3266542

Strand: Reverse

Name: yxeN [H]

Synonym: BCQ_3323

Alternate gene names: 222096983

Gene position: 3266542-3265874 (Counterclockwise)

Preceding gene: 222096984

Following gene: 222096982

Centisome position: 62.65

GC content: 35.13

Gene sequence:

>669_bases
GTGAAGTTTGATGTAACGTATTTTTTAGAAAGTTTTCCGCAATTATTTAAGTATGTATACATAACTTTAGGAATTACTGT
AGTTTCAATGATTATTTCTTTTGTTATAGGGATAGGTTTGGCGATCATAACGAAAAACAAAACGAAATTTCTATATTCTA
TTGCAAGAGTATATATATCTTTCTTTAGAGGAACACCTTTATTAGTTCAATTGTTCGTGTTGTATTTCGGATTGCCGCAA
ATATTCCCAACCTTTACAGTACTTACAGCGATGCAAGCGACTTTAATTGGTCTCAGTTTAAATAATGCAGCGTATTTGTC
AGAAATTATTCGAGGTTCATTAAATGCTGTCGAATCGGGACAAATGGATGCTTGTTTATCAGTTGGGATGACAAAGGCGC
AAGCTATGCGACAGATTATCTTTCCGCAAGCTATTCGGGTTGCAGTACCGTCACTTGGAAATAATTTTGTTGGATTGTTA
AAAGAATCTTCGTTATCTTTTGCACTTGGGGTGGCTGAAATTTTAGCGCAAGCGAAAATGTTAGCGGCACAATCGTATCG
TTATATGGAAAGTTACTTAGCGGTAGCGATTGTATATTGGATTATTACAATCGTAATTAGCTGGGGACAGAAAAAGTTAG
AAAAGAAACTTGATGCACCGTATTTGTAA

Upstream 100 bases:

>100_bases
GCAAACGTATGAAGCGTTTGGAAGATGAGGGGAAATGGATTAACATTCAACTCTTCTTATATGTGTAAGAAGAGTTTTTT
ATTTAGAGAGGGGGGATAGA

Downstream 100 bases:

>100_bases
CAAGGATGAGGTGATATGTGTGATTGAGATAAGTGATTTGTATAAATCTTATAAGAGTAATGAAGTACTAAAAGGAATCT
CACTTACTGTAAATAAAGGA

Product: amino acid abc transproter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYISFFRGTPLLVQLFVLYFGLPQ
IFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLL
KESSLSFALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKLDAPYL

Sequences:

>Translated_222_residues
MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYISFFRGTPLLVQLFVLYFGLPQ
IFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLL
KESSLSFALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKLDAPYL
>Mature_222_residues
MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYISFFRGTPLLVQLFVLYFGLPQ
IFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESGQMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLL
KESSLSFALGVAEILAQAKMLAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKLDAPYL

Specific function: Probably part of the ABC transporter complex yxeMNO that could be involved in amino-acid import. May transport S- methylcysteine. Probably responsible for the translocation of the substrate across the membrane (Probable) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=37.8995433789954, Blast_Score=159, Evalue=1e-40,
Organism=Escherichia coli, GI1787030, Length=219, Percent_Identity=32.4200913242009, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787086, Length=215, Percent_Identity=31.6279069767442, Blast_Score=116, Evalue=1e-27,
Organism=Escherichia coli, GI1786874, Length=210, Percent_Identity=28.0952380952381, Blast_Score=101, Evalue=4e-23,
Organism=Escherichia coli, GI1786873, Length=208, Percent_Identity=30.2884615384615, Blast_Score=98, Evalue=5e-22,
Organism=Escherichia coli, GI1788645, Length=208, Percent_Identity=29.8076923076923, Blast_Score=97, Evalue=6e-22,
Organism=Escherichia coli, GI87082239, Length=203, Percent_Identity=30.0492610837438, Blast_Score=91, Evalue=9e-20,
Organism=Escherichia coli, GI1787087, Length=228, Percent_Identity=25.8771929824561, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1788646, Length=193, Percent_Identity=26.4248704663212, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI48994930, Length=193, Percent_Identity=31.0880829015544, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24691; Mature: 24691

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHH
FFRGTPLLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESG
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
QMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKLDAPYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC
>Mature Secondary Structure
MKFDVTYFLESFPQLFKYVYITLGITVVSMIISFVIGIGLAIITKNKTKFLYSIARVYIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHH
FFRGTPLLVQLFVLYFGLPQIFPTFTVLTAMQATLIGLSLNNAAYLSEIIRGSLNAVESG
HHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCC
QMDACLSVGMTKAQAMRQIIFPQAIRVAVPSLGNNFVGLLKESSLSFALGVAEILAQAKM
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LAAQSYRYMESYLAVAIVYWIITIVISWGQKKLEKKLDAPYL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8867804; 9384377 [H]