| Definition | Bacillus cereus Q1 chromosome, complete genome. |
|---|---|
| Accession | NC_011969 |
| Length | 5,214,195 |
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The map label for this gene is colA [H]
Identifier: 222096976
GI number: 222096976
Start: 3257764
End: 3260679
Strand: Reverse
Name: colA [H]
Synonym: BCQ_3316
Alternate gene names: 222096976
Gene position: 3260679-3257764 (Counterclockwise)
Preceding gene: 222096977
Following gene: 222096975
Centisome position: 62.53
GC content: 35.53
Gene sequence:
>2916_bases ATGAAAGGCTATTCAAAAAAAGTGTTAGTAGGGGTAAGTTTTGCTAGTTTCATGTTAGGGAGTTTTCAAGGGGACGCATT GGCAGAAGGTACAAAGGGAGAGCAAGTTTCATATCGGAATGTGCTCAAAATGGAGCCGATTGGTTTACAATTACCAGTGC AAGAATTAGCTCATTCATCAAAAGTGCTAGAAAATAAGTCTTTTGAGAAAAGGCTAAAATTTGCTGATTTGTCACAAAGA CCGCCTGAAGTGAAAAAGGAAAGTAAGCAATTAGCTGTAGCGAAAACGTATACAATTGCTGAATTAAATCAATTGAGCAA TCAGCAGTTAGTGGACTTACTTGTAACAATTGATTGGGAGCAAATTACTGGGCTATTTCAGTTTAATAAGGATAGTCTTG CATTCTATCAAAATGATAGTAGAATGCAGGCAATTATTGATAAATTGAACCAGCAAGGACAAGCTTATACGAAAGATGAT TCAAAAGGGATTGAGACTTTAGTAGAGGTGTTACGATCTGGTTTTTATTTAGGATTTTATCATACAGAATTAAGTAAACT AAATGAGCGAAGCTATCATGATAAATGCTTACCTGCATTAAAAACGATTGCGAATAACTCGAATTTCAAGCTCGGTACGT TAGAACAAAATAGAGTTGTCTCATCATATGGAAAATTAATTGGAAATGCTTCAAGTGATGTGGAAACGATCACATCAGCT GCAAAGATTTTTAAACAATATAATGATAATTTTTCTACATTGGTAGATAATCTTTCAGCTGGAAATGCGATTTACGATAT TATGCAAGGTGTTGATTACGATATTCAATCGTATTTGTACGATACGAGAAAAGCACCGGAAGATACAATATGGTATCAAA AAATTGATAGCTATATTAATGAATTAAGTCGTTTTGCCTTAATTGGAACGGTGACAGCGAAAAATGGTTGGTTAATTAAT AATGGTATTTATTATACAGGTAGACTTGGTACGTTCCATAGTACAGAAACGAAAGGATTACAAGTTGTAACAGATGCCAT GAAAATCTATCCGTATTTAGGTGAGCAATATTTCGTAGCTGCTGAGCAAATTGCGACGAATTATGGCGGGAAAGATGCGA ATGGTAAAGTGGTTGATCTAGATCAAATAAGAGAAGATGGTAAGAAAAAATATTTACCGAAAACGTATACGTTCGATGAT GGAGCAATTGTGTTAAAAGCTGGAGATAAGGTGACTGAGGAAAAAGTAAAACGTCTATATTGGGCGGCAAAAGAAGTGAA GGCACAATTCCATCGTACGGTTGAAAGTGACCAGCCGTTAGAAAAAGGCAATCCTGATGATGTATTAACGATGGTTGTTT ATAATAGCCCAGCTGAATATCAATTTAACCGTCAATTATACGGGTATGAAACGAATAACGGCGGTCTTTATATAGAAGGA ACAGGTACGTTCTTTACTTATGAACGTACGCCAGAAGAAAGCATTTATAGTTTGGAAGAATTGTTCCGACATGAGTTCAC GCATTATTTACAAGGTAGATATGAAGTGCCAGGACTTTGGGGACAAGGGAAGATGTATGAGAATGAGAGATTATCTTGGT TTGAAGAAGGGAATGCGGAGTTTTTTGCAGGTGCAACGAGAACAGATAATGTTGTACCGAGAAAGAGTATTATAGGAGGC ATATCTTCAAATCCAGCAGAACGTTATACAGCAGAGAGAACGTTAAACGCAAAATATGGAACGTGGGATTTCTATAATTA TTCCTTCGCTTTACAATCGTACATGTACAATAAGAGATATGATATGTTTGACAAAATTCATGATCTTATTAGGAAAAATG ATGTAACAGCATATGATGCATACCGCTCTGCTTTAAGTAAAGATGCGAATTTAAATAAAGAGTATCAAGACTATATGCAA ATGTTAGTAGATAACCGTGAGAAATATAATGTTCCATTAGTATCAGATGATTATTTAGCGACGCACGCACCGAAACCAGT TTCAGATATTGCAGCAGAAATTACAGCAGAAGCAAAATTAAGTAATGTATCAGTTAAGAAAAACAAATCACAGTTCTTTC ATACATTTACACTACAAGGAACATATACAGGTACGACTGCAAAAGGAGAATATGAAGACTGGAAGACAATTACACAAAAC GTAAATGATACGTTAAAACGTTTAAGTGCGAAAGAATGGACAGGCTATAAAACAGTAACAGCTTATTTCGTAAATTACCG TGTGAATGCAGCAGGACAATTTGAGTATGATGTTGTATTCCATGGGATTAATACAGAAGAAGGTGCTGTGAATAAAGCGC CAGTTGCGGTTATAAACGGCTCATATAGCGGAAATGTAAATGCAGCAATTTCGTTTAAAAGCGATGGATCGAAAGATGAA GATGGAAAAATTGTTGCTTATAAATGGGAGTTTGGTGATGGTACTGTAAGTAATGAACAAAATCCGACTCATGTATACAC AAAAGAAGGAACATATACGGCAAAATTAACAGTAACAGATGACAAAGGATTAACGAATACTGCTACAACGAATGTAACGG TTCAAAAGAAAGAAGATAATAGTGTAGAAAAAGAGCCGAATAACTCATTCCAGACAGCAAATAAACTGCAATTCAATCAA GTTTTACGTGCTAGTTTAGGAAACGGTGATACGAGTGATTACTTTGAAATAAATGTGGAAACGGCGAAAAACCTGCAAAT TAATGTAACGAAGGAAAATAATATTGGAGTAAACTGGGTTCTTTATTCGGAAGCAGATTTAAATAATTATGTTACGTATG CCCAGCAAGAAGGAAATAAGTTAGTAGGAAGTTACTACACGTATCCAGGGAAATATTATTTACATGTGTATCAGTATGGC GGGGGAACAGGGAATTATACGGTAGAAGTGAAATAG
Upstream 100 bases:
>100_bases CATGTGTGAACGTTACCTTATTTTTTCTCAATACAGTATAAAAAGTAAAAATAGTAAAATAATGGTGCGGTACACTAAAA AATGTAAGGTAGGGGAGAGC
Downstream 100 bases:
>100_bases TAAAAAGGTCGCCGTGAGTGGCGACCTTTTTGTTGCGTGTTATACAAAAAAATTTACAAAAGCTTGATCGGCACTACCAA GAGAAAATAACGTAGCTACC
Product: microbial collagenase
Products: NA
Alternate protein names: 120 kDa collagenase [H]
Number of amino acids: Translated: 971; Mature: 971
Protein sequence:
>971_residues MKGYSKKVLVGVSFASFMLGSFQGDALAEGTKGEQVSYRNVLKMEPIGLQLPVQELAHSSKVLENKSFEKRLKFADLSQR PPEVKKESKQLAVAKTYTIAELNQLSNQQLVDLLVTIDWEQITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDD SKGIETLVEVLRSGFYLGFYHTELSKLNERSYHDKCLPALKTIANNSNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPEDTIWYQKIDSYINELSRFALIGTVTAKNGWLIN NGIYYTGRLGTFHSTETKGLQVVTDAMKIYPYLGEQYFVAAEQIATNYGGKDANGKVVDLDQIREDGKKKYLPKTYTFDD GAIVLKAGDKVTEEKVKRLYWAAKEVKAQFHRTVESDQPLEKGNPDDVLTMVVYNSPAEYQFNRQLYGYETNNGGLYIEG TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKMYENERLSWFEEGNAEFFAGATRTDNVVPRKSIIGG ISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRYDMFDKIHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQ MLVDNREKYNVPLVSDDYLATHAPKPVSDIAAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKTITQN VNDTLKRLSAKEWTGYKTVTAYFVNYRVNAAGQFEYDVVFHGINTEEGAVNKAPVAVINGSYSGNVNAAISFKSDGSKDE DGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTAKLTVTDDKGLTNTATTNVTVQKKEDNSVEKEPNNSFQTANKLQFNQ VLRASLGNGDTSDYFEINVETAKNLQINVTKENNIGVNWVLYSEADLNNYVTYAQQEGNKLVGSYYTYPGKYYLHVYQYG GGTGNYTVEVK
Sequences:
>Translated_971_residues MKGYSKKVLVGVSFASFMLGSFQGDALAEGTKGEQVSYRNVLKMEPIGLQLPVQELAHSSKVLENKSFEKRLKFADLSQR PPEVKKESKQLAVAKTYTIAELNQLSNQQLVDLLVTIDWEQITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDD SKGIETLVEVLRSGFYLGFYHTELSKLNERSYHDKCLPALKTIANNSNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPEDTIWYQKIDSYINELSRFALIGTVTAKNGWLIN NGIYYTGRLGTFHSTETKGLQVVTDAMKIYPYLGEQYFVAAEQIATNYGGKDANGKVVDLDQIREDGKKKYLPKTYTFDD GAIVLKAGDKVTEEKVKRLYWAAKEVKAQFHRTVESDQPLEKGNPDDVLTMVVYNSPAEYQFNRQLYGYETNNGGLYIEG TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKMYENERLSWFEEGNAEFFAGATRTDNVVPRKSIIGG ISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRYDMFDKIHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQ MLVDNREKYNVPLVSDDYLATHAPKPVSDIAAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKTITQN VNDTLKRLSAKEWTGYKTVTAYFVNYRVNAAGQFEYDVVFHGINTEEGAVNKAPVAVINGSYSGNVNAAISFKSDGSKDE DGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTAKLTVTDDKGLTNTATTNVTVQKKEDNSVEKEPNNSFQTANKLQFNQ VLRASLGNGDTSDYFEINVETAKNLQINVTKENNIGVNWVLYSEADLNNYVTYAQQEGNKLVGSYYTYPGKYYLHVYQYG GGTGNYTVEVK >Mature_971_residues MKGYSKKVLVGVSFASFMLGSFQGDALAEGTKGEQVSYRNVLKMEPIGLQLPVQELAHSSKVLENKSFEKRLKFADLSQR PPEVKKESKQLAVAKTYTIAELNQLSNQQLVDLLVTIDWEQITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDD SKGIETLVEVLRSGFYLGFYHTELSKLNERSYHDKCLPALKTIANNSNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPEDTIWYQKIDSYINELSRFALIGTVTAKNGWLIN NGIYYTGRLGTFHSTETKGLQVVTDAMKIYPYLGEQYFVAAEQIATNYGGKDANGKVVDLDQIREDGKKKYLPKTYTFDD GAIVLKAGDKVTEEKVKRLYWAAKEVKAQFHRTVESDQPLEKGNPDDVLTMVVYNSPAEYQFNRQLYGYETNNGGLYIEG TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKMYENERLSWFEEGNAEFFAGATRTDNVVPRKSIIGG ISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRYDMFDKIHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQ MLVDNREKYNVPLVSDDYLATHAPKPVSDIAAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKTITQN VNDTLKRLSAKEWTGYKTVTAYFVNYRVNAAGQFEYDVVFHGINTEEGAVNKAPVAVINGSYSGNVNAAISFKSDGSKDE DGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTAKLTVTDDKGLTNTATTNVTVQKKEDNSVEKEPNNSFQTANKLQFNQ VLRASLGNGDTSDYFEINVETAKNLQINVTKENNIGVNWVLYSEADLNNYVTYAQQEGNKLVGSYYTYPGKYYLHVYQYG GGTGNYTVEVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PKD domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013510 - InterPro: IPR007280 - InterPro: IPR002169 - InterPro: IPR013661 - InterPro: IPR022409 - InterPro: IPR000601 [H]
Pfam domain/function: PF01752 Peptidase_M9; PF08453 Peptidase_M9_N; PF00801 PKD; PF04151 PPC [H]
EC number: =3.4.24.3 [H]
Molecular weight: Translated: 109936; Mature: 109936
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: PS50093 PKD ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKGYSKKVLVGVSFASFMLGSFQGDALAEGTKGEQVSYRNVLKMEPIGLQLPVQELAHSS CCCCCCEEEEEEEHHHHHHHCCCCCHHCCCCCCCCCHHCCCEEECCCCCCCCHHHHHHHH KVLENKSFEKRLKFADLSQRPPEVKKESKQLAVAKTYTIAELNQLSNQQLVDLLVTIDWE HHHHCCCHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEHHHHHHHCCCHHEEEEEEEECHH QITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDDSKGIETLVEVLRSGFYLGFY HHCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE HTELSKLNERSYHDKCLPALKTIANNSNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA HHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPEDTIWYQKIDSYIN HHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH ELSRFALIGTVTAKNGWLINNGIYYTGRLGTFHSTETKGLQVVTDAMKIYPYLGEQYFVA HHHHEEEEEEEEECCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEE AEQIATNYGGKDANGKVVDLDQIREDGKKKYLPKTYTFDDGAIVLKAGDKVTEEKVKRLY HHHHHHCCCCCCCCCCEEEHHHHHHCHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHH WAAKEVKAQFHRTVESDQPLEKGNPDDVLTMVVYNSPAEYQFNRQLYGYETNNGGLYIEG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEEEECCCEEEEEE TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKMYENERLSWFEEGNAE CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEECCCCE FFAGATRTDNVVPRKSIIGGISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRY EEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCH DMFDKIHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQMLVDNREKYNVPLVSDDYLA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCC THAPKPVSDIAAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKTITQN CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHH VNDTLKRLSAKEWTGYKTVTAYFVNYRVNAAGQFEYDVVFHGINTEEGAVNKAPVAVING HHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEC SYSGNVNAAISFKSDGSKDEDGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTAKLTVTD CCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEEC DKGLTNTATTNVTVQKKEDNSVEKEPNNSFQTANKLQFNQVLRASLGNGDTSDYFEINVE CCCCCCCEECEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE TAKNLQINVTKENNIGVNWVLYSEADLNNYVTYAQQEGNKLVGSYYTYPGKYYLHVYQYG ECCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEHHCCCEEEEEEEECCCEEEEEEEEEC GGTGNYTVEVK CCCCCEEEEEC >Mature Secondary Structure MKGYSKKVLVGVSFASFMLGSFQGDALAEGTKGEQVSYRNVLKMEPIGLQLPVQELAHSS CCCCCCEEEEEEEHHHHHHHCCCCCHHCCCCCCCCCHHCCCEEECCCCCCCCHHHHHHHH KVLENKSFEKRLKFADLSQRPPEVKKESKQLAVAKTYTIAELNQLSNQQLVDLLVTIDWE HHHHCCCHHHHHHHCCCCCCCCHHHHHHHHEEEEEEEHHHHHHHCCCHHEEEEEEEECHH QITGLFQFNKDSLAFYQNDSRMQAIIDKLNQQGQAYTKDDSKGIETLVEVLRSGFYLGFY HHCEEEEECCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEE HTELSKLNERSYHDKCLPALKTIANNSNFKLGTLEQNRVVSSYGKLIGNASSDVETITSA HHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHH AKIFKQYNDNFSTLVDNLSAGNAIYDIMQGVDYDIQSYLYDTRKAPEDTIWYQKIDSYIN HHHHHHHCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHH ELSRFALIGTVTAKNGWLINNGIYYTGRLGTFHSTETKGLQVVTDAMKIYPYLGEQYFVA HHHHEEEEEEEEECCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCHHEEE AEQIATNYGGKDANGKVVDLDQIREDGKKKYLPKTYTFDDGAIVLKAGDKVTEEKVKRLY HHHHHHCCCCCCCCCCEEEHHHHHHCHHHCCCCCEEEECCCEEEEECCCCHHHHHHHHHH WAAKEVKAQFHRTVESDQPLEKGNPDDVLTMVVYNSPAEYQFNRQLYGYETNNGGLYIEG HHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEECCEEEEEEECCCEEEEEE TGTFFTYERTPEESIYSLEELFRHEFTHYLQGRYEVPGLWGQGKMYENERLSWFEEGNAE CCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCEEECCCCE FFAGATRTDNVVPRKSIIGGISSNPAERYTAERTLNAKYGTWDFYNYSFALQSYMYNKRY EEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCH DMFDKIHDLIRKNDVTAYDAYRSALSKDANLNKEYQDYMQMLVDNREKYNVPLVSDDYLA HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCEECCCCCC THAPKPVSDIAAEITAEAKLSNVSVKKNKSQFFHTFTLQGTYTGTTAKGEYEDWKTITQN CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEEEEEECCCCCCCCHHHHHHHHH VNDTLKRLSAKEWTGYKTVTAYFVNYRVNAAGQFEYDVVFHGINTEEGAVNKAPVAVING HHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCCCEEEEEC SYSGNVNAAISFKSDGSKDEDGKIVAYKWEFGDGTVSNEQNPTHVYTKEGTYTAKLTVTD CCCCCEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEEECCEEEEEEEEEC DKGLTNTATTNVTVQKKEDNSVEKEPNNSFQTANKLQFNQVLRASLGNGDTSDYFEINVE CCCCCCCEECEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEE TAKNLQINVTKENNIGVNWVLYSEADLNNYVTYAQQEGNKLVGSYYTYPGKYYLHVYQYG ECCCEEEEEEECCCCCEEEEEEECCCCCCCEEEEHHCCCEEEEEEEECCCEEEEEEEEEC GGTGNYTVEVK CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8282691; 11792842 [H]